Protein–RNA interactions for Protein: P39944

UBP5, Ubiquitin carboxyl-terminal hydrolase 5, yeastyeast

Predictions only

Length 805 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP5P39944 STB4YMR019W 2850 nt2.41□□□□□ -2.02
UBP5P39944 UFD4YKL010C 4452 nt2.41□□□□□ -2.02
UBP5P39944 TRA1YHR099W 11235 nt2.41□□□□□ -2.02
UBP5P39944 RAD34YDR314C 2079 nt2.4□□□□□ -2.02
UBP5P39944 YIL002W-AYIL002W-A 210 nt2.4□□□□□ -2.03
UBP5P39944 SGM1YJR134C 2124 nt2.4□□□□□ -2.03
UBP5P39944 YOL083C-AYOL083C-A 141 nt2.4□□□□□ -2.03
UBP5P39944 snR53snR53 91 nt2.4□□□□□ -2.03
UBP5P39944 HRD3YLR207W 2502 nt2.4□□□□□ -2.03
UBP5P39944 CSF1YLR087C 8877 nt2.4□□□□□ -2.03
UBP5P39944 RGA2YDR379W 3030 nt2.39□□□□□ -2.03
UBP5P39944 SPF1YEL031W 3648 nt2.39□□□□□ -2.03
UBP5P39944 PAU8YAL068C 363 nt2.39□□□□□ -2.03
UBP5P39944 PAU18YLL064C 363 nt2.39□□□□□ -2.03
UBP5P39944 PAU6YNR076W 363 nt2.39□□□□□ -2.03
UBP5P39944 PAU20YOL161C 363 nt2.39□□□□□ -2.03
UBP5P39944 PSD2YGR170W 3417 nt2.39□□□□□ -2.03
UBP5P39944 NAM7YMR080C 2916 nt2.38□□□□□ -2.03
UBP5P39944 VMR1YHL035C 4779 nt2.38□□□□□ -2.03
UBP5P39944 YJL026C-AYJL026C-A 222 nt2.38□□□□□ -2.03
UBP5P39944 INP53YOR109W 3324 nt2.38□□□□□ -2.03
UBP5P39944 TRS130YMR218C 3309 nt2.37□□□□□ -2.03
UBP5P39944 YOL098CYOL098C 3114 nt2.37□□□□□ -2.03
UBP5P39944 snR76snR76 109 nt2.37□□□□□ -2.03
UBP5P39944 YDR521WYDR521W 336 nt2.37□□□□□ -2.03
UBP5P39944 POM152YMR129W 4014 nt2.37□□□□□ -2.03
UBP5P39944 ISW1YBR245C 3390 nt2.37□□□□□ -2.03
UBP5P39944 SWR1YDR334W 4545 nt2.36□□□□□ -2.03
UBP5P39944 KSP1YHR082C 3090 nt2.36□□□□□ -2.03
UBP5P39944 RIC1YLR039C 3171 nt2.36□□□□□ -2.03
UBP5P39944 YMR242W-AYMR242W-A 90 nt2.36□□□□□ -2.03
UBP5P39944 YBL071C-BYBL071C-B 99 nt2.36□□□□□ -2.03
UBP5P39944 UTP22YGR090W 3714 nt2.36□□□□□ -2.03
UBP5P39944 SPO22YIL073C 2928 nt2.36□□□□□ -2.03
UBP5P39944 HMI1YOL095C 2121 nt2.35□□□□□ -2.03
UBP5P39944 SUL1YBR294W 2580 nt2.35□□□□□ -2.03
UBP5P39944 DUG2YBR281C 2637 nt2.35□□□□□ -2.03
UBP5P39944 SEC31YDL195W 3822 nt2.35□□□□□ -2.03
UBP5P39944 SAP185YJL098W 3177 nt2.35□□□□□ -2.03
UBP5P39944 RGR1YLR071C 3249 nt2.35□□□□□ -2.03
UBP5P39944 TOP2YNL088W 4287 nt2.35□□□□□ -2.03
UBP5P39944 TAE2YPL009C 3117 nt2.34□□□□□ -2.03
UBP5P39944 LHS1YKL073W 2646 nt2.34□□□□□ -2.03
UBP5P39944 YJL052C-AYJL052C-A 120 nt2.34□□□□□ -2.03
UBP5P39944 YOR394C-AYOR394C-A 168 nt2.34□□□□□ -2.03
UBP5P39944 IFH1YLR223C 3258 nt2.34□□□□□ -2.03
UBP5P39944 IRR1YIL026C 3453 nt2.34□□□□□ -2.04
UBP5P39944 MNL2YLR057W 2550 nt2.33□□□□□ -2.04
UBP5P39944 DGR1YNL130C-A 147 nt2.33□□□□□ -2.04
UBP5P39944 YBR072C-AYBR072C-A 162 nt2.33□□□□□ -2.04
UBP5P39944 SSN2YDR443C 4263 nt2.33□□□□□ -2.04
UBP5P39944 COG6YNL041C 2520 nt2.33□□□□□ -2.04
UBP5P39944 TTI1YKL033W 3117 nt2.33□□□□□ -2.04
UBP5P39944 MAD1YGL086W 2250 nt2.32□□□□□ -2.04
UBP5P39944 CRS5YOR031W 210 nt2.32□□□□□ -2.04
UBP5P39944 PRP6YBR055C 2700 nt2.31□□□□□ -2.04
UBP5P39944 COX5BYIL111W 456 nt2.31□□□□□ -2.04
UBP5P39944 YBL039C-AYBL039C-A 84 nt2.3□□□□□ -2.04
UBP5P39944 DGR2YKL121W 2559 nt2.3□□□□□ -2.04
UBP5P39944 YER078W-AYER078W-A 165 nt2.29□□□□□ -2.04
UBP5P39944 SNC1YAL030W 354 nt2.29□□□□□ -2.04
UBP5P39944 YGR109W-BYGR109W-B 4644 nt2.28□□□□□ -2.04
UBP5P39944 SSD1YDR293C 3753 nt2.28□□□□□ -2.04
UBP5P39944 SPP41YDR464W 4308 nt2.28□□□□□ -2.04
UBP5P39944 AFI1YOR129C 2682 nt2.28□□□□□ -2.04
UBP5P39944 NUP157YER105C 4176 nt2.28□□□□□ -2.05
UBP5P39944 ENV11YGR071C 2583 nt2.27□□□□□ -2.05
UBP5P39944 KAP123YER110C 3342 nt2.27□□□□□ -2.05
UBP5P39944 YOR108C-AYOR108C-A 210 nt2.27□□□□□ -2.05
UBP5P39944 MDS3YGL197W 4464 nt2.27□□□□□ -2.05
UBP5P39944 PTP2YOR208W 2253 nt2.26□□□□□ -2.05
UBP5P39944 RAV1YJR033C 4074 nt2.26□□□□□ -2.05
UBP5P39944 CRM1YGR218W 3255 nt2.26□□□□□ -2.05
UBP5P39944 GLG1YKR058W 1851 nt2.26□□□□□ -2.05
UBP5P39944 SAS3YBL052C 2496 nt2.25□□□□□ -2.05
UBP5P39944 MGM1YOR211C 2646 nt2.25□□□□□ -2.05
UBP5P39944 ALK1YGL021W 2283 nt2.25□□□□□ -2.05
UBP5P39944 YGR240C-AYGR240C-A 201 nt2.24□□□□□ -2.05
UBP5P39944 YAL042C-AYAL042C-A 378 nt2.24□□□□□ -2.05
UBP5P39944 YLL020CYLL020C 306 nt2.24□□□□□ -2.05
UBP5P39944 BIR1YJR089W 2865 nt2.24□□□□□ -2.05
UBP5P39944 NUP100YKL068W 2880 nt2.24□□□□□ -2.05
UBP5P39944 BRE1YDL074C 2103 nt2.23□□□□□ -2.05
UBP5P39944 YMR175W-AYMR175W-A 195 nt2.23□□□□□ -2.05
UBP5P39944 NOP14YDL148C 2433 nt2.23□□□□□ -2.05
UBP5P39944 KRE33YNL132W 3171 nt2.23□□□□□ -2.05
UBP5P39944 YDR210WYDR210W 228 nt2.22□□□□□ -2.05
UBP5P39944 tM(CAU)Q2tM(CAU)Q2 78 nt2.22□□□□□ -2.05
UBP5P39944 UBP2YOR124C 3819 nt2.22□□□□□ -2.05
UBP5P39944 NEO1YIL048W 3456 nt2.22□□□□□ -2.05
UBP5P39944 KAP120YPL125W 3099 nt2.22□□□□□ -2.05
UBP5P39944 FAR11YNL127W 2862 nt2.22□□□□□ -2.05
UBP5P39944 APL2YKL135C 2181 nt2.22□□□□□ -2.05
UBP5P39944 VPS16YPL045W 2397 nt2.21□□□□□ -2.06
UBP5P39944 GCV2YMR189W 3105 nt2.21□□□□□ -2.06
UBP5P39944 TOF1YNL273W 3717 nt2.21□□□□□ -2.06
UBP5P39944 snR64snR64 101 nt2.21□□□□□ -2.06
UBP5P39944 ZRG8YER033C 3231 nt2.21□□□□□ -2.06
UBP5P39944 RPS26AYGL189C 360 nt2.21□□□□□ -2.06
UBP5P39944 HSL1YKL101W 4557 nt2.21□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms