Protein–RNA interactions for Protein: P39944

UBP5, Ubiquitin carboxyl-terminal hydrolase 5, yeastyeast

Predictions only

Length 805 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP5P39944 snR128snR128 126 nt0.43□□□□□ -2.34
UBP5P39944 snR6snR6 112 nt0.39□□□□□ -2.35
UBP5P39944 tC(GCA)QtC(GCA)Q 76 nt0.39□□□□□ -2.35
UBP5P39944 RPL41BYDL133C-A 78 nt0.35□□□□□ -2.35
UBP5P39944 snR161snR161 161 nt0.35□□□□□ -2.35
UBP5P39944 tA(UGC)QtA(UGC)Q 76 nt0.34□□□□□ -2.36
UBP5P39944 YOL013W-AYOL013W-A 192 nt0.3□□□□□ -2.36
UBP5P39944 snR73snR73 106 nt0.26□□□□□ -2.37
UBP5P39944 YJL113WYJL113W 4647 nt0.25□□□□□ -2.37
UBP5P39944 snR58snR58 96 nt0.15□□□□□ -2.39
UBP5P39944 CDC65tQ(CUG)M 72 nt0.07□□□□□ -2.4
UBP5P39944 YMR315W-AYMR315W-A 108 nt0.03□□□□□ -2.4
UBP5P39944 URB1YKL014C 5295 nt-0□□□□□ -2.41
UBP5P39944 YNR077CYNR077C 255 nt-0.06□□□□□ -2.42
UBP5P39944 YHL009W-BYHL009W-B 5409 nt-0.14□□□□□ -2.43
UBP5P39944 YOR309CYOR309C 381 nt-0.16□□□□□ -2.44
UBP5P39944 snR87snR87 109 nt-0.19□□□□□ -2.44
UBP5P39944 tP(UGG)QtP(UGG)Q 72 nt-0.24□□□□□ -2.45
UBP5P39944 snR33snR33 183 nt-0.36□□□□□ -2.47
UBP5P39944 tT(UGU)G1tT(UGU)G1 72 nt-0.5□□□□□ -2.49
UBP5P39944 tT(UGU)G2tT(UGU)G2 72 nt-0.5□□□□□ -2.49
UBP5P39944 tT(UGU)PtT(UGU)P 72 nt-0.5□□□□□ -2.49
UBP5P39944 YBR223W-AYBR223W-A 120 nt-0.55□□□□□ -2.5
UBP5P39944 tY(GUA)QtY(GUA)Q 84 nt-0.69□□□□□ -2.52
UBP5P39944 YOL166W-AYOL166W-A 156 nt-0.77□□□□□ -2.53
UBP5P39944 YDR543CYDR543C 300 nt-1.28□□□□□ -2.61
UBP5P39944 YBR126W-BYBR126W-B 144 nt-1.44□□□□□ -2.64
UBP5P39944 YJL136W-AYJL136W-A 84 nt-1.61□□□□□ -2.67
UBP5P39944 YJR162CYJR162C 351 nt-2.23□□□□□ -2.77
Retrieved 29 of 7,029 protein–RNA pairs in 5.7 ms