Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 PRP39YML046W 1890 nt2.52□□□□□ -2.01
SSF1P38789 PDR8YLR266C 2106 nt2.51□□□□□ -2.01
SSF1P38789 GYP5YPL249C 2685 nt2.51□□□□□ -2.01
SSF1P38789 KOG1YHR186C 4674 nt2.51□□□□□ -2.01
SSF1P38789 COF1YLL050C 432 nt2.51□□□□□ -2.01
SSF1P38789 YBL008W-AYBL008W-A 240 nt2.51□□□□□ -2.01
SSF1P38789 YNL338WYNL338W 159 nt2.51□□□□□ -2.01
SSF1P38789 MGA2YIR033W 3342 nt2.5□□□□□ -2.01
SSF1P38789 UTP21YLR409C 2820 nt2.5□□□□□ -2.01
SSF1P38789 YBR131C-AYBR131C-A 90 nt2.5□□□□□ -2.01
SSF1P38789 MYO4YAL029C 4416 nt2.5□□□□□ -2.01
SSF1P38789 BNI1YNL271C 5862 nt2.5□□□□□ -2.01
SSF1P38789 PIP2YOR363C 2991 nt2.49□□□□□ -2.01
SSF1P38789 PBY1YBR094W 2262 nt2.49□□□□□ -2.01
SSF1P38789 YGL217CYGL217C 342 nt2.49□□□□□ -2.01
SSF1P38789 YNL097C-BYNL097C-B 123 nt2.49□□□□□ -2.01
SSF1P38789 SLI15YBR156C 2097 nt2.49□□□□□ -2.01
SSF1P38789 HSL1YKL101W 4557 nt2.49□□□□□ -2.01
SSF1P38789 TRS65YGR166W 1683 nt2.48□□□□□ -2.01
SSF1P38789 PKH2YOL100W 3246 nt2.48□□□□□ -2.01
SSF1P38789 NCA2YPR155C 1851 nt2.48□□□□□ -2.01
SSF1P38789 ALK1YGL021W 2283 nt2.47□□□□□ -2.01
SSF1P38789 COG4YPR105C 2586 nt2.46□□□□□ -2.02
SSF1P38789 AIM44YPL158C 2277 nt2.46□□□□□ -2.02
SSF1P38789 YER172C-AYER172C-A 381 nt2.46□□□□□ -2.02
SSF1P38789 SEC31YDL195W 3822 nt2.46□□□□□ -2.02
SSF1P38789 PAU3YCR104W 375 nt2.45□□□□□ -2.02
SSF1P38789 YDR521WYDR521W 336 nt2.45□□□□□ -2.02
SSF1P38789 TMA7YLR262C-A 195 nt2.45□□□□□ -2.02
SSF1P38789 DGR1YNL130C-A 147 nt2.45□□□□□ -2.02
SSF1P38789 snR46snR46 197 nt2.45□□□□□ -2.02
SSF1P38789 SLD3YGL113W 2007 nt2.44□□□□□ -2.02
SSF1P38789 YHR210CYHR210C 1026 nt2.43□□□□□ -2.02
SSF1P38789 YLL019W-AYLL019W-A 93 nt2.43□□□□□ -2.02
SSF1P38789 snR52snR52 92 nt2.43□□□□□ -2.02
SSF1P38789 GCN2YDR283C 4980 nt2.43□□□□□ -2.02
SSF1P38789 STH1YIL126W 4080 nt2.42□□□□□ -2.02
SSF1P38789 FAB1YFR019W 6837 nt2.42□□□□□ -2.02
SSF1P38789 TRM3YDL112W 4311 nt2.42□□□□□ -2.02
SSF1P38789 IFH1YLR223C 3258 nt2.42□□□□□ -2.02
SSF1P38789 Q0092Q0092 141 nt2.42□□□□□ -2.02
SSF1P38789 SBE22YHR103W 2559 nt2.42□□□□□ -2.02
SSF1P38789 REV3YPL167C 4515 nt2.41□□□□□ -2.02
SSF1P38789 YJR039WYJR039W 3366 nt2.41□□□□□ -2.02
SSF1P38789 FKS1YLR342W 5631 nt2.41□□□□□ -2.02
SSF1P38789 YDL196WYDL196W 330 nt2.41□□□□□ -2.02
SSF1P38789 AHC1YOR023C 1701 nt2.41□□□□□ -2.02
SSF1P38789 LRE1YCL051W 1752 nt2.41□□□□□ -2.02
SSF1P38789 EMC5YIL027C 426 nt2.4□□□□□ -2.03
SSF1P38789 SPO24YPR036W-A 204 nt2.4□□□□□ -2.03
SSF1P38789 ADR1YDR216W 3972 nt2.4□□□□□ -2.03
SSF1P38789 FIG4YNL325C 2640 nt2.39□□□□□ -2.03
SSF1P38789 NUT1YGL151W 3399 nt2.39□□□□□ -2.03
SSF1P38789 LHS1YKL073W 2646 nt2.38□□□□□ -2.03
SSF1P38789 PEP1YBL017C 4740 nt2.37□□□□□ -2.03
SSF1P38789 YOR345CYOR345C 351 nt2.37□□□□□ -2.03
SSF1P38789 YBR206WYBR206W 324 nt2.37□□□□□ -2.03
SSF1P38789 TOR2YKL203C 7425 nt2.37□□□□□ -2.03
SSF1P38789 RPL33BYOR234C 324 nt2.36□□□□□ -2.03
SSF1P38789 NEO1YIL048W 3456 nt2.36□□□□□ -2.03
SSF1P38789 USO1YDL058W 5373 nt2.35□□□□□ -2.03
SSF1P38789 YEL073CYEL073C 324 nt2.34□□□□□ -2.03
SSF1P38789 SKI3YPR189W 4299 nt2.33□□□□□ -2.04
SSF1P38789 RAD50YNL250W 3939 nt2.33□□□□□ -2.04
SSF1P38789 KIP1YBL063W 3336 nt2.32□□□□□ -2.04
SSF1P38789 ALY2YJL084C 3141 nt2.31□□□□□ -2.04
SSF1P38789 UBR2YLR024C 5619 nt2.31□□□□□ -2.04
SSF1P38789 SPP41YDR464W 4308 nt2.31□□□□□ -2.04
SSF1P38789 YOR381W-AYOR381W-A 168 nt2.31□□□□□ -2.04
SSF1P38789 UBP2YOR124C 3819 nt2.31□□□□□ -2.04
SSF1P38789 HAL9YOL089C 3093 nt2.31□□□□□ -2.04
SSF1P38789 UFD2YDL190C 2886 nt2.3□□□□□ -2.04
SSF1P38789 CSF1YLR087C 8877 nt2.3□□□□□ -2.04
SSF1P38789 YOR161W-BYOR161W-B 261 nt2.29□□□□□ -2.04
SSF1P38789 YCS4YLR272C 3531 nt2.29□□□□□ -2.04
SSF1P38789 TBS1YBR150C 3285 nt2.29□□□□□ -2.04
SSF1P38789 ATP8Q0080 147 nt2.28□□□□□ -2.04
SSF1P38789 PAN2YGL094C 3348 nt2.28□□□□□ -2.04
SSF1P38789 MMS4YBR098W 2076 nt2.27□□□□□ -2.05
SSF1P38789 YDL007C-AYDL007C-A 258 nt2.27□□□□□ -2.05
SSF1P38789 YDR354C-AYDR354C-A 144 nt2.27□□□□□ -2.05
SSF1P38789 YDL206WYDL206W 2289 nt2.27□□□□□ -2.05
SSF1P38789 YGR109W-BYGR109W-B 4644 nt2.26□□□□□ -2.05
SSF1P38789 YLL054CYLL054C 2532 nt2.26□□□□□ -2.05
SSF1P38789 KCS1YDR017C 3153 nt2.26□□□□□ -2.05
SSF1P38789 YOR170WYOR170W 306 nt2.26□□□□□ -2.05
SSF1P38789 APL1YJR005W 2103 nt2.26□□□□□ -2.05
SSF1P38789 COY1YKL179C 2040 nt2.25□□□□□ -2.05
SSF1P38789 SLX4YLR135W 2247 nt2.25□□□□□ -2.05
SSF1P38789 CTF4YPR135W 2784 nt2.24□□□□□ -2.05
SSF1P38789 PKH3YDR466W 2697 nt2.22□□□□□ -2.05
SSF1P38789 PMP1YCR024C-A 123 nt2.22□□□□□ -2.05
SSF1P38789 YJL026C-AYJL026C-A 222 nt2.22□□□□□ -2.05
SSF1P38789 YMR272W-BYMR272W-B 108 nt2.21□□□□□ -2.06
SSF1P38789 PAA1YDR071C 576 nt2.2□□□□□ -2.06
SSF1P38789 YJL022WYJL022W 309 nt2.2□□□□□ -2.06
SSF1P38789 TTI1YKL033W 3117 nt2.19□□□□□ -2.06
SSF1P38789 SMC4YLR086W 4257 nt2.19□□□□□ -2.06
SSF1P38789 YLR422WYLR422W 5799 nt2.19□□□□□ -2.06
SSF1P38789 YNL211CYNL211C 261 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms