Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 YLL054CYLL054C 2532 nt1.09□□□□□ -2.23
SHE3P38272 YDR102CYDR102C 333 nt1.09□□□□□ -2.23
SHE3P38272 YDR524W-CYDR524W-C 90 nt1.09□□□□□ -2.23
SHE3P38272 MAM33YIL070C 801 nt1.09□□□□□ -2.23
SHE3P38272 YSY6YBR162W-A 198 nt1.09□□□□□ -2.23
SHE3P38272 MSN5YDR335W 3675 nt1.09□□□□□ -2.24
SHE3P38272 RAD34YDR314C 2079 nt1.09□□□□□ -2.24
SHE3P38272 LCD1YDR499W 2244 nt1.08□□□□□ -2.24
SHE3P38272 YDL240C-AYDL240C-A 138 nt1.08□□□□□ -2.24
SHE3P38272 UBP3YER151C 2739 nt1.08□□□□□ -2.24
SHE3P38272 SLI15YBR156C 2097 nt1.08□□□□□ -2.24
SHE3P38272 MPT5YGL178W 2580 nt1.07□□□□□ -2.24
SHE3P38272 FIG4YNL325C 2640 nt1.07□□□□□ -2.24
SHE3P38272 YJR011CYJR011C 786 nt1.07□□□□□ -2.24
SHE3P38272 YOR108C-AYOR108C-A 210 nt1.07□□□□□ -2.24
SHE3P38272 YPL038W-AYPL038W-A 192 nt1.07□□□□□ -2.24
SHE3P38272 APL1YJR005W 2103 nt1.07□□□□□ -2.24
SHE3P38272 NUT1YGL151W 3399 nt1.07□□□□□ -2.24
SHE3P38272 SPT21YMR179W 2277 nt1.06□□□□□ -2.24
SHE3P38272 NUP145YGL092W 3954 nt1.06□□□□□ -2.24
SHE3P38272 NST1YNL091W 3723 nt1.06□□□□□ -2.24
SHE3P38272 NHP2YDL208W 471 nt1.06□□□□□ -2.24
SHE3P38272 CDC39YCR093W 6327 nt1.06□□□□□ -2.24
SHE3P38272 PAM16YJL104W 450 nt1.05□□□□□ -2.24
SHE3P38272 YLL020CYLL020C 306 nt1.05□□□□□ -2.24
SHE3P38272 YBR221W-AYBR221W-A 105 nt1.05□□□□□ -2.24
SHE3P38272 PKH2YOL100W 3246 nt1.05□□□□□ -2.24
SHE3P38272 snR36snR36 182 nt1.04□□□□□ -2.24
SHE3P38272 NIP100YPL174C 2607 nt1.04□□□□□ -2.24
SHE3P38272 BEM2YER155C 6504 nt1.04□□□□□ -2.24
SHE3P38272 ROM2YLR371W 4071 nt1.03□□□□□ -2.24
SHE3P38272 SSS1YDR086C 243 nt1.03□□□□□ -2.24
SHE3P38272 YFL032WYFL032W 321 nt1.03□□□□□ -2.24
SHE3P38272 TAR1YLR154W-C 375 nt1.03□□□□□ -2.24
SHE3P38272 YMR290W-AYMR290W-A 348 nt1.03□□□□□ -2.24
SHE3P38272 STO1YMR125W 2586 nt1.03□□□□□ -2.24
SHE3P38272 GEA2YEL022W 4380 nt1.03□□□□□ -2.24
SHE3P38272 BUD3YCL014W 4911 nt1.03□□□□□ -2.24
SHE3P38272 YDL206WYDL206W 2289 nt1.03□□□□□ -2.25
SHE3P38272 SET3YKR029C 2256 nt1.03□□□□□ -2.25
SHE3P38272 Q0142Q0142 177 nt1.02□□□□□ -2.25
SHE3P38272 RPL34BYIL052C 366 nt1.02□□□□□ -2.25
SHE3P38272 APL3YBL037W 3078 nt1.02□□□□□ -2.25
SHE3P38272 YPR063CYPR063C 423 nt1.02□□□□□ -2.25
SHE3P38272 DBP6YNR038W 1890 nt1.01□□□□□ -2.25
SHE3P38272 YCK3YER123W 1575 nt1.01□□□□□ -2.25
SHE3P38272 YDR413CYDR413C 576 nt1.01□□□□□ -2.25
SHE3P38272 RPS30BYOR182C 192 nt1.01□□□□□ -2.25
SHE3P38272 AIM44YPL158C 2277 nt1.01□□□□□ -2.25
SHE3P38272 VAM6YDL077C 3150 nt1.01□□□□□ -2.25
SHE3P38272 SWI4YER111C 3282 nt1□□□□□ -2.25
SHE3P38272 YBR206WYBR206W 324 nt1□□□□□ -2.25
SHE3P38272 YER097WYER097W 330 nt0.99□□□□□ -2.25
SHE3P38272 YIL115W-AYIL115W-A 372 nt0.99□□□□□ -2.25
SHE3P38272 CUL3YGR003W 2235 nt0.99□□□□□ -2.25
SHE3P38272 MMS4YBR098W 2076 nt0.98□□□□□ -2.25
SHE3P38272 YLL007CYLL007C 1998 nt0.98□□□□□ -2.25
SHE3P38272 GPG1YGL121C 381 nt0.98□□□□□ -2.25
SHE3P38272 YKL118WYKL118W 312 nt0.98□□□□□ -2.25
SHE3P38272 EAF1YDR359C 2949 nt0.98□□□□□ -2.25
SHE3P38272 STB6YKL072W 2301 nt0.98□□□□□ -2.25
SHE3P38272 OST1YJL002C 1431 nt0.98□□□□□ -2.25
SHE3P38272 YDR521WYDR521W 336 nt0.97□□□□□ -2.25
SHE3P38272 INA22YIR024C 651 nt0.97□□□□□ -2.25
SHE3P38272 YKL136WYKL136W 399 nt0.97□□□□□ -2.25
SHE3P38272 snR60snR60 104 nt0.96□□□□□ -2.26
SHE3P38272 ECM12YHR021W-A 456 nt0.96□□□□□ -2.26
SHE3P38272 YOR161W-BYOR161W-B 261 nt0.96□□□□□ -2.26
SHE3P38272 YBR064WYBR064W 429 nt0.96□□□□□ -2.26
SHE3P38272 PDE2YOR360C 1581 nt0.96□□□□□ -2.26
SHE3P38272 IFH1YLR223C 3258 nt0.95□□□□□ -2.26
SHE3P38272 YDR344CYDR344C 444 nt0.95□□□□□ -2.26
SHE3P38272 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
SHE3P38272 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
SHE3P38272 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
SHE3P38272 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
SHE3P38272 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
SHE3P38272 WAR1YML076C 2835 nt0.94□□□□□ -2.26
SHE3P38272 YDR183C-AYDR183C-A 258 nt0.94□□□□□ -2.26
SHE3P38272 YFL063WYFL063W 456 nt0.94□□□□□ -2.26
SHE3P38272 YIL032CYIL032C 357 nt0.94□□□□□ -2.26
SHE3P38272 YIR044CYIR044C 186 nt0.94□□□□□ -2.26
SHE3P38272 ALY2YJL084C 3141 nt0.94□□□□□ -2.26
SHE3P38272 SPO21YOL091W 1830 nt0.94□□□□□ -2.26
SHE3P38272 YMR193C-AYMR193C-A 387 nt0.93□□□□□ -2.26
SHE3P38272 YBR200W-AYBR200W-A 165 nt0.93□□□□□ -2.26
SHE3P38272 PTP2YOR208W 2253 nt0.92□□□□□ -2.26
SHE3P38272 HTL1YCR020W-B 237 nt0.92□□□□□ -2.26
SHE3P38272 YGL149WYGL149W 306 nt0.92□□□□□ -2.26
SHE3P38272 YJL120WYJL120W 324 nt0.92□□□□□ -2.26
SHE3P38272 RPS25BYLR333C 327 nt0.92□□□□□ -2.26
SHE3P38272 YOR011W-AYOR011W-A 207 nt0.92□□□□□ -2.26
SHE3P38272 PAU24YBR301W 363 nt0.91□□□□□ -2.26
SHE3P38272 SMC1YFL008W 3678 nt0.91□□□□□ -2.26
SHE3P38272 COG8YML071C 1824 nt0.9□□□□□ -2.27
SHE3P38272 YIL142C-AYIL142C-A 333 nt0.9□□□□□ -2.27
SHE3P38272 STE5YDR103W 2754 nt0.9□□□□□ -2.27
SHE3P38272 MCM10YIL150C 1716 nt0.89□□□□□ -2.27
SHE3P38272 VIK1YPL253C 1944 nt0.89□□□□□ -2.27
SHE3P38272 HMRA2YCR096C 360 nt0.89□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms