Protein–RNA interactions for Protein: P0CX27

RPL42A, 60S ribosomal protein L42-A, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL42AP0CX27 UTP22YGR090W 3714 nt1.61□□□□□ -2.15
RPL42AP0CX27 GCN2YDR283C 4980 nt1.6□□□□□ -2.15
RPL42AP0CX27 COF1YLL050C 432 nt1.6□□□□□ -2.15
RPL42AP0CX27 INO80YGL150C 4470 nt1.6□□□□□ -2.15
RPL42AP0CX27 UBP2YOR124C 3819 nt1.59□□□□□ -2.15
RPL42AP0CX27 MYO2YOR326W 4725 nt1.59□□□□□ -2.15
RPL42AP0CX27 YNL144CYNL144C 2223 nt1.59□□□□□ -2.16
RPL42AP0CX27 HIR3YJR140C 4947 nt1.58□□□□□ -2.16
RPL42AP0CX27 YMR175W-AYMR175W-A 195 nt1.58□□□□□ -2.16
RPL42AP0CX27 MSH6YDR097C 3729 nt1.58□□□□□ -2.16
RPL42AP0CX27 PIP2YOR363C 2991 nt1.58□□□□□ -2.16
RPL42AP0CX27 APL5YPL195W 2799 nt1.58□□□□□ -2.16
RPL42AP0CX27 NCA2YPR155C 1851 nt1.57□□□□□ -2.16
RPL42AP0CX27 PAU3YCR104W 375 nt1.57□□□□□ -2.16
RPL42AP0CX27 snR52snR52 92 nt1.57□□□□□ -2.16
RPL42AP0CX27 SFB2YNL049C 2631 nt1.57□□□□□ -2.16
RPL42AP0CX27 PBY1YBR094W 2262 nt1.56□□□□□ -2.16
RPL42AP0CX27 SLI15YBR156C 2097 nt1.56□□□□□ -2.16
RPL42AP0CX27 YLL019W-AYLL019W-A 93 nt1.56□□□□□ -2.16
RPL42AP0CX27 YMR045CYMR045C 5268 nt1.56□□□□□ -2.16
RPL42AP0CX27 ALK1YGL021W 2283 nt1.56□□□□□ -2.16
RPL42AP0CX27 AIM44YPL158C 2277 nt1.56□□□□□ -2.16
RPL42AP0CX27 RGA1YOR127W 3024 nt1.56□□□□□ -2.16
RPL42AP0CX27 SLN1YIL147C 3663 nt1.55□□□□□ -2.16
RPL42AP0CX27 UTP21YLR409C 2820 nt1.55□□□□□ -2.16
RPL42AP0CX27 YDL007C-AYDL007C-A 258 nt1.55□□□□□ -2.16
RPL42AP0CX27 YDR521WYDR521W 336 nt1.55□□□□□ -2.16
RPL42AP0CX27 PKH2YOL100W 3246 nt1.55□□□□□ -2.16
RPL42AP0CX27 USO1YDL058W 5373 nt1.55□□□□□ -2.16
RPL42AP0CX27 COG4YPR105C 2586 nt1.54□□□□□ -2.16
RPL42AP0CX27 HSL1YKL101W 4557 nt1.54□□□□□ -2.16
RPL42AP0CX27 ATG9YDL149W 2994 nt1.54□□□□□ -2.16
RPL42AP0CX27 SLD3YGL113W 2007 nt1.54□□□□□ -2.16
RPL42AP0CX27 MYO4YAL029C 4416 nt1.54□□□□□ -2.16
RPL42AP0CX27 YDL196WYDL196W 330 nt1.54□□□□□ -2.16
RPL42AP0CX27 ATP8Q0080 147 nt1.54□□□□□ -2.16
RPL42AP0CX27 YHR210CYHR210C 1026 nt1.54□□□□□ -2.16
RPL42AP0CX27 UBR2YLR024C 5619 nt1.54□□□□□ -2.16
RPL42AP0CX27 LRE1YCL051W 1752 nt1.54□□□□□ -2.16
RPL42AP0CX27 PDR8YLR266C 2106 nt1.53□□□□□ -2.16
RPL42AP0CX27 FIG4YNL325C 2640 nt1.53□□□□□ -2.16
RPL42AP0CX27 AHC1YOR023C 1701 nt1.53□□□□□ -2.16
RPL42AP0CX27 YOR345CYOR345C 351 nt1.53□□□□□ -2.16
RPL42AP0CX27 FAB1YFR019W 6837 nt1.52□□□□□ -2.17
RPL42AP0CX27 IFH1YLR223C 3258 nt1.52□□□□□ -2.17
RPL42AP0CX27 SBE22YHR103W 2559 nt1.52□□□□□ -2.17
RPL42AP0CX27 tC(GCA)BtC(GCA)B 72 nt1.52□□□□□ -2.17
RPL42AP0CX27 tC(GCA)GtC(GCA)G 72 nt1.52□□□□□ -2.17
RPL42AP0CX27 tC(GCA)P1tC(GCA)P1 72 nt1.52□□□□□ -2.17
RPL42AP0CX27 tC(GCA)P2tC(GCA)P2 72 nt1.52□□□□□ -2.17
RPL42AP0CX27 YOR170WYOR170W 306 nt1.52□□□□□ -2.17
RPL42AP0CX27 RPL33BYOR234C 324 nt1.52□□□□□ -2.17
RPL42AP0CX27 YEL073CYEL073C 324 nt1.51□□□□□ -2.17
RPL42AP0CX27 YER172C-AYER172C-A 381 nt1.51□□□□□ -2.17
RPL42AP0CX27 YOR381W-AYOR381W-A 168 nt1.51□□□□□ -2.17
RPL42AP0CX27 MGA2YIR033W 3342 nt1.51□□□□□ -2.17
RPL42AP0CX27 TRM3YDL112W 4311 nt1.5□□□□□ -2.17
RPL42AP0CX27 ADR1YDR216W 3972 nt1.5□□□□□ -2.17
RPL42AP0CX27 SPO24YPR036W-A 204 nt1.5□□□□□ -2.17
RPL42AP0CX27 YBR206WYBR206W 324 nt1.5□□□□□ -2.17
RPL42AP0CX27 YJR039WYJR039W 3366 nt1.5□□□□□ -2.17
RPL42AP0CX27 IRC20YLR247C 4671 nt1.49□□□□□ -2.17
RPL42AP0CX27 NEO1YIL048W 3456 nt1.49□□□□□ -2.17
RPL42AP0CX27 BPH1YCR032W 6504 nt1.49□□□□□ -2.17
RPL42AP0CX27 EMC5YIL027C 426 nt1.49□□□□□ -2.17
RPL42AP0CX27 YOR161W-BYOR161W-B 261 nt1.49□□□□□ -2.17
RPL42AP0CX27 NUT1YGL151W 3399 nt1.49□□□□□ -2.17
RPL42AP0CX27 SEC31YDL195W 3822 nt1.49□□□□□ -2.17
RPL42AP0CX27 HAL9YOL089C 3093 nt1.48□□□□□ -2.17
RPL42AP0CX27 LHS1YKL073W 2646 nt1.47□□□□□ -2.17
RPL42AP0CX27 COY1YKL179C 2040 nt1.46□□□□□ -2.18
RPL42AP0CX27 PMP1YCR024C-A 123 nt1.46□□□□□ -2.18
RPL42AP0CX27 RAD50YNL250W 3939 nt1.45□□□□□ -2.18
RPL42AP0CX27 YDR354C-AYDR354C-A 144 nt1.45□□□□□ -2.18
RPL42AP0CX27 YNL170WYNL170W 396 nt1.45□□□□□ -2.18
RPL42AP0CX27 ALY2YJL084C 3141 nt1.44□□□□□ -2.18
RPL42AP0CX27 YGR109W-BYGR109W-B 4644 nt1.44□□□□□ -2.18
RPL42AP0CX27 KIP1YBL063W 3336 nt1.44□□□□□ -2.18
RPL42AP0CX27 SKI3YPR189W 4299 nt1.44□□□□□ -2.18
RPL42AP0CX27 GYP5YPL249C 2685 nt1.43□□□□□ -2.18
RPL42AP0CX27 TMA7YLR262C-A 195 nt1.43□□□□□ -2.18
RPL42AP0CX27 YDL206WYDL206W 2289 nt1.43□□□□□ -2.18
RPL42AP0CX27 YOR093CYOR093C 4947 nt1.43□□□□□ -2.18
RPL42AP0CX27 UFD2YDL190C 2886 nt1.43□□□□□ -2.18
RPL42AP0CX27 APL1YJR005W 2103 nt1.42□□□□□ -2.18
RPL42AP0CX27 YJL026C-AYJL026C-A 222 nt1.42□□□□□ -2.18
RPL42AP0CX27 YOL019W-AYOL019W-A 153 nt1.42□□□□□ -2.18
RPL42AP0CX27 DNF3YMR162C 4971 nt1.42□□□□□ -2.18
RPL42AP0CX27 MMS4YBR098W 2076 nt1.42□□□□□ -2.18
RPL42AP0CX27 PAN2YGL094C 3348 nt1.42□□□□□ -2.18
RPL42AP0CX27 TBS1YBR150C 3285 nt1.42□□□□□ -2.18
RPL42AP0CX27 RTP1YMR185W 2946 nt1.41□□□□□ -2.18
RPL42AP0CX27 YCS4YLR272C 3531 nt1.41□□□□□ -2.18
RPL42AP0CX27 YLL054CYLL054C 2532 nt1.4□□□□□ -2.18
RPL42AP0CX27 KCS1YDR017C 3153 nt1.4□□□□□ -2.19
RPL42AP0CX27 PAA1YDR071C 576 nt1.4□□□□□ -2.19
RPL42AP0CX27 SDH6YDR379C-A 240 nt1.4□□□□□ -2.19
RPL42AP0CX27 YGR164WYGR164W 336 nt1.4□□□□□ -2.19
RPL42AP0CX27 YBR221W-AYBR221W-A 105 nt1.4□□□□□ -2.19
RPL42AP0CX27 SLX4YLR135W 2247 nt1.4□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 171.2 ms