Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM56-RWDD3S4R434 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 RASA4CP-201ENST00000424092 1398 ntBASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 AC010141.2-201ENST00000452426 721 ntBASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 AL354811.1-201ENST00000610286 706 ntBASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 AL358852.1-201ENST00000623174 1268 ntBASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM56-RWDD3S4R434 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 AL355001.2-201ENST00000620617 1191 ntBASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM56-RWDD3S4R434 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 AP001330.3-201ENST00000520123 633 ntBASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 FAM21FP-204ENST00000608637 956 ntBASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM56-RWDD3S4R434 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TMEM56-RWDD3S4R434 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.39■□□□□ 0.22
TMEM56-RWDD3S4R434 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.39■□□□□ 0.22
TMEM56-RWDD3S4R434 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms