Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
AFAP1Q8N556 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
AFAP1Q8N556 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
AFAP1Q8N556 GUK1-204ENST00000366721 689 ntTSL 3 BASIC30.36■■■□□ 2.45
AFAP1Q8N556 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC30.36■■■□□ 2.45
AFAP1Q8N556 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
AFAP1Q8N556 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
AFAP1Q8N556 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC30.36■■■□□ 2.45
AFAP1Q8N556 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC30.36■■■□□ 2.45
AFAP1Q8N556 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
AFAP1Q8N556 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC30.36■■■□□ 2.45
AFAP1Q8N556 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC30.36■■■□□ 2.45
AFAP1Q8N556 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
AFAP1Q8N556 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC30.36■■■□□ 2.45
AFAP1Q8N556 MIR2861-201ENST00000636310 90 ntBASIC30.36■■■□□ 2.45
AFAP1Q8N556 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
AFAP1Q8N556 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC30.36■■■□□ 2.45
AFAP1Q8N556 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC30.35■■■□□ 2.45
AFAP1Q8N556 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
AFAP1Q8N556 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
AFAP1Q8N556 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC30.35■■■□□ 2.45
AFAP1Q8N556 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC30.35■■■□□ 2.45
AFAP1Q8N556 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC30.35■■■□□ 2.45
AFAP1Q8N556 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC30.35■■■□□ 2.45
AFAP1Q8N556 LTBR-211ENST00000543190 785 ntTSL 3 BASIC30.35■■■□□ 2.45
AFAP1Q8N556 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
AFAP1Q8N556 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
AFAP1Q8N556 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
AFAP1Q8N556 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
AFAP1Q8N556 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
AFAP1Q8N556 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
AFAP1Q8N556 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
AFAP1Q8N556 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
AFAP1Q8N556 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC30.34■■■□□ 2.45
AFAP1Q8N556 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
AFAP1Q8N556 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
AFAP1Q8N556 PTBP1P-201ENST00000554374 1601 ntBASIC30.33■■■□□ 2.45
AFAP1Q8N556 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC30.33■■■□□ 2.45
AFAP1Q8N556 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC30.33■■■□□ 2.45
AFAP1Q8N556 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC30.33■■■□□ 2.45
AFAP1Q8N556 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
AFAP1Q8N556 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC30.33■■■□□ 2.45
AFAP1Q8N556 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC30.33■■■□□ 2.45
AFAP1Q8N556 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC30.33■■■□□ 2.45
AFAP1Q8N556 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC30.33■■■□□ 2.45
AFAP1Q8N556 AC242852.2-201ENST00000615738 1807 ntBASIC30.33■■■□□ 2.45
AFAP1Q8N556 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
AFAP1Q8N556 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
AFAP1Q8N556 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC30.32■■■□□ 2.44
AFAP1Q8N556 STAC-204ENST00000457375 1366 ntTSL 2 BASIC30.32■■■□□ 2.44
AFAP1Q8N556 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
AFAP1Q8N556 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
AFAP1Q8N556 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC30.32■■■□□ 2.44
AFAP1Q8N556 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC30.32■■■□□ 2.44
AFAP1Q8N556 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
AFAP1Q8N556 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
AFAP1Q8N556 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
AFAP1Q8N556 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
AFAP1Q8N556 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC30.31■■■□□ 2.44
AFAP1Q8N556 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
AFAP1Q8N556 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
AFAP1Q8N556 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
AFAP1Q8N556 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
AFAP1Q8N556 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC30.31■■■□□ 2.44
AFAP1Q8N556 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
AFAP1Q8N556 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
AFAP1Q8N556 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC30.3■■■□□ 2.44
AFAP1Q8N556 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
AFAP1Q8N556 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
AFAP1Q8N556 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC30.3■■■□□ 2.44
AFAP1Q8N556 ECEL1P2-202ENST00000465689 757 ntBASIC30.3■■■□□ 2.44
AFAP1Q8N556 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC30.3■■■□□ 2.44
AFAP1Q8N556 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC30.3■■■□□ 2.44
AFAP1Q8N556 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
AFAP1Q8N556 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC30.3■■■□□ 2.44
AFAP1Q8N556 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
AFAP1Q8N556 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
AFAP1Q8N556 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC30.3■■■□□ 2.44
AFAP1Q8N556 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
AFAP1Q8N556 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
AFAP1Q8N556 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
AFAP1Q8N556 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
AFAP1Q8N556 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
AFAP1Q8N556 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC30.29■■■□□ 2.44
AFAP1Q8N556 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC30.29■■■□□ 2.44
AFAP1Q8N556 ABBA01031674.1-201ENST00000635145 728 ntBASIC30.29■■■□□ 2.44
AFAP1Q8N556 CLN6-221ENST00000637494 765 ntTSL 5 BASIC30.29■■■□□ 2.44
AFAP1Q8N556 LGALS8-AS1-201ENST00000487567 1457 ntBASIC30.29■■■□□ 2.44
AFAP1Q8N556 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
AFAP1Q8N556 GALC-202ENST00000393568 2054 ntTSL 2 BASIC30.29■■■□□ 2.44
AFAP1Q8N556 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
AFAP1Q8N556 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
AFAP1Q8N556 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
AFAP1Q8N556 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
AFAP1Q8N556 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
AFAP1Q8N556 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
AFAP1Q8N556 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC30.28■■■□□ 2.44
AFAP1Q8N556 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
AFAP1Q8N556 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
AFAP1Q8N556 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms