Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 YNL058CYNL058C 951 nt1.46□□□□□ -2.18
VTA1Q06263 SPC110YDR356W 2835 nt1.46□□□□□ -2.18
VTA1Q06263 NUT1YGL151W 3399 nt1.45□□□□□ -2.18
VTA1Q06263 SGO1YOR073W 1773 nt1.45□□□□□ -2.18
VTA1Q06263 YAR053WYAR053W 297 nt1.45□□□□□ -2.18
VTA1Q06263 SLX4YLR135W 2247 nt1.45□□□□□ -2.18
VTA1Q06263 NOC3YLR002C 1992 nt1.45□□□□□ -2.18
VTA1Q06263 ADR1YDR216W 3972 nt1.44□□□□□ -2.18
VTA1Q06263 RPL38YLR325C 237 nt1.44□□□□□ -2.18
VTA1Q06263 YOR199WYOR199W 330 nt1.44□□□□□ -2.18
VTA1Q06263 FYV8YGR196C 2454 nt1.44□□□□□ -2.18
VTA1Q06263 POL5YEL055C 3069 nt1.43□□□□□ -2.18
VTA1Q06263 RPS20YHL015W 366 nt1.43□□□□□ -2.18
VTA1Q06263 YJL135WYJL135W 318 nt1.43□□□□□ -2.18
VTA1Q06263 SDH2YLL041C 801 nt1.43□□□□□ -2.18
VTA1Q06263 YMR242W-AYMR242W-A 90 nt1.43□□□□□ -2.18
VTA1Q06263 YOR029WYOR029W 336 nt1.43□□□□□ -2.18
VTA1Q06263 YBR012CYBR012C 420 nt1.43□□□□□ -2.18
VTA1Q06263 YPL261CYPL261C 309 nt1.43□□□□□ -2.18
VTA1Q06263 ZIP2YGL249W 2115 nt1.43□□□□□ -2.18
VTA1Q06263 INP2YMR163C 2118 nt1.42□□□□□ -2.18
VTA1Q06263 MDS3YGL197W 4464 nt1.42□□□□□ -2.18
VTA1Q06263 VPS54YDR027C 2670 nt1.42□□□□□ -2.18
VTA1Q06263 EST2YLR318W 2655 nt1.42□□□□□ -2.18
VTA1Q06263 CSN9YDR179C 489 nt1.42□□□□□ -2.18
VTA1Q06263 tW(UCA)QtW(UCA)Q 74 nt1.42□□□□□ -2.18
VTA1Q06263 YAL063C-AYAL063C-A 291 nt1.42□□□□□ -2.18
VTA1Q06263 snR14snR14 160 nt1.42□□□□□ -2.18
VTA1Q06263 PIK1YNL267W 3201 nt1.42□□□□□ -2.18
VTA1Q06263 tQ(UUG)E2tQ(UUG)E2 72 nt1.41□□□□□ -2.18
VTA1Q06263 YML007C-AYML007C-A 111 nt1.41□□□□□ -2.18
VTA1Q06263 YOL160WYOL160W 342 nt1.41□□□□□ -2.18
VTA1Q06263 SCW11YGL028C 1629 nt1.4□□□□□ -2.19
VTA1Q06263 HKR1YDR420W 5409 nt1.39□□□□□ -2.19
VTA1Q06263 snR56snR56 88 nt1.39□□□□□ -2.19
VTA1Q06263 NPC2YDL046W 522 nt1.39□□□□□ -2.19
VTA1Q06263 YJL015CYJL015C 285 nt1.39□□□□□ -2.19
VTA1Q06263 YPR002C-AYPR002C-A 198 nt1.39□□□□□ -2.19
VTA1Q06263 YSY6YBR162W-A 198 nt1.39□□□□□ -2.19
VTA1Q06263 RIM20YOR275C 1986 nt1.38□□□□□ -2.19
VTA1Q06263 YOR108C-AYOR108C-A 210 nt1.38□□□□□ -2.19
VTA1Q06263 BIL1YOR304C-A 231 nt1.38□□□□□ -2.19
VTA1Q06263 MAD1YGL086W 2250 nt1.38□□□□□ -2.19
VTA1Q06263 YLL054CYLL054C 2532 nt1.38□□□□□ -2.19
VTA1Q06263 MSH3YCR092C 3057 nt1.38□□□□□ -2.19
VTA1Q06263 NUP188YML103C 4968 nt1.37□□□□□ -2.19
VTA1Q06263 AZF1YOR113W 2745 nt1.37□□□□□ -2.19
VTA1Q06263 YDL211CYDL211C 1119 nt1.37□□□□□ -2.19
VTA1Q06263 YHL046W-AYHL046W-A 327 nt1.37□□□□□ -2.19
VTA1Q06263 YPR016W-AYPR016W-A 261 nt1.37□□□□□ -2.19
VTA1Q06263 YCS4YLR272C 3531 nt1.37□□□□□ -2.19
VTA1Q06263 YDR426CYDR426C 378 nt1.36□□□□□ -2.19
VTA1Q06263 GIM4YEL003W 336 nt1.36□□□□□ -2.19
VTA1Q06263 tH(GUG)E1tH(GUG)E1 72 nt1.35□□□□□ -2.19
VTA1Q06263 tH(GUG)E2tH(GUG)E2 72 nt1.35□□□□□ -2.19
VTA1Q06263 tH(GUG)G1tH(GUG)G1 72 nt1.35□□□□□ -2.19
VTA1Q06263 tH(GUG)G2tH(GUG)G2 72 nt1.35□□□□□ -2.19
VTA1Q06263 tH(GUG)HtH(GUG)H 72 nt1.35□□□□□ -2.19
VTA1Q06263 tH(GUG)KtH(GUG)K 72 nt1.35□□□□□ -2.19
VTA1Q06263 tH(GUG)MtH(GUG)M 72 nt1.35□□□□□ -2.19
VTA1Q06263 YHR175W-AYHR175W-A 150 nt1.35□□□□□ -2.19
VTA1Q06263 YOR161W-BYOR161W-B 261 nt1.35□□□□□ -2.19
VTA1Q06263 RAD34YDR314C 2079 nt1.35□□□□□ -2.19
VTA1Q06263 SLI15YBR156C 2097 nt1.35□□□□□ -2.19
VTA1Q06263 SPC98YNL126W 2541 nt1.34□□□□□ -2.19
VTA1Q06263 NIP100YPL174C 2607 nt1.34□□□□□ -2.19
VTA1Q06263 CDC25YLR310C 4770 nt1.34□□□□□ -2.19
VTA1Q06263 RPL35AYDL191W 363 nt1.34□□□□□ -2.19
VTA1Q06263 PCC1YKR095W-A 267 nt1.34□□□□□ -2.19
VTA1Q06263 SPT21YMR179W 2277 nt1.34□□□□□ -2.2
VTA1Q06263 MSN5YDR335W 3675 nt1.33□□□□□ -2.2
VTA1Q06263 MPT5YGL178W 2580 nt1.33□□□□□ -2.2
VTA1Q06263 SWI4YER111C 3282 nt1.33□□□□□ -2.2
VTA1Q06263 YMR290W-AYMR290W-A 348 nt1.33□□□□□ -2.2
VTA1Q06263 YPR197CYPR197C 564 nt1.33□□□□□ -2.2
VTA1Q06263 LCD1YDR499W 2244 nt1.33□□□□□ -2.2
VTA1Q06263 PIP2YOR363C 2991 nt1.32□□□□□ -2.2
VTA1Q06263 PBY1YBR094W 2262 nt1.32□□□□□ -2.2
VTA1Q06263 COG4YPR105C 2586 nt1.32□□□□□ -2.2
VTA1Q06263 ALY2YJL084C 3141 nt1.31□□□□□ -2.2
VTA1Q06263 tR(ACG)Q2tR(ACG)Q2 74 nt1.31□□□□□ -2.2
VTA1Q06263 YLL020CYLL020C 306 nt1.31□□□□□ -2.2
VTA1Q06263 APL3YBL037W 3078 nt1.31□□□□□ -2.2
VTA1Q06263 YHR007C-AYHR007C-A 216 nt1.3□□□□□ -2.2
VTA1Q06263 MAM33YIL070C 801 nt1.3□□□□□ -2.2
VTA1Q06263 AHC1YOR023C 1701 nt1.29□□□□□ -2.2
VTA1Q06263 SEC21YNL287W 2808 nt1.29□□□□□ -2.2
VTA1Q06263 SLD3YGL113W 2007 nt1.29□□□□□ -2.2
VTA1Q06263 CDC39YCR093W 6327 nt1.29□□□□□ -2.2
VTA1Q06263 CDC36YDL165W 576 nt1.29□□□□□ -2.2
VTA1Q06263 RRT15YLR162W-A 189 nt1.29□□□□□ -2.2
VTA1Q06263 HTB2YBL002W 396 nt1.29□□□□□ -2.2
VTA1Q06263 YBL008W-AYBL008W-A 240 nt1.28□□□□□ -2.2
VTA1Q06263 YAF9YNL107W 681 nt1.28□□□□□ -2.2
VTA1Q06263 YPR063CYPR063C 423 nt1.28□□□□□ -2.2
VTA1Q06263 SET3YKR029C 2256 nt1.27□□□□□ -2.21
VTA1Q06263 AIM44YPL158C 2277 nt1.27□□□□□ -2.21
VTA1Q06263 YJR011CYJR011C 786 nt1.27□□□□□ -2.21
VTA1Q06263 YAR029WYAR029W 225 nt1.27□□□□□ -2.21
VTA1Q06263 YBR221W-AYBR221W-A 105 nt1.27□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 30.5 ms