Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 CDC60YPL160W 3273 nt2.01□□□□□ -2.09
HRD3Q05787 PDE2YOR360C 1581 nt2.01□□□□□ -2.09
HRD3Q05787 YHR071C-AYHR071C-A 321 nt2□□□□□ -2.09
HRD3Q05787 YOR302WYOR302W 78 nt2□□□□□ -2.09
HRD3Q05787 CHC1YGL206C 4962 nt2□□□□□ -2.09
HRD3Q05787 DCP2YNL118C 2913 nt2□□□□□ -2.09
HRD3Q05787 SPP41YDR464W 4308 nt2□□□□□ -2.09
HRD3Q05787 YDR341CYDR341C 1824 nt1.99□□□□□ -2.09
HRD3Q05787 PET309YLR067C 2898 nt1.98□□□□□ -2.09
HRD3Q05787 YOR343W-BYOR343W-B 5313 nt1.98□□□□□ -2.09
HRD3Q05787 YJL182CYJL182C 318 nt1.98□□□□□ -2.09
HRD3Q05787 YOR011W-AYOR011W-A 207 nt1.98□□□□□ -2.09
HRD3Q05787 SEC31YDL195W 3822 nt1.98□□□□□ -2.09
HRD3Q05787 NOP14YDL148C 2433 nt1.97□□□□□ -2.09
HRD3Q05787 YOR093CYOR093C 4947 nt1.97□□□□□ -2.09
HRD3Q05787 tF(GAA)QtF(GAA)Q 75 nt1.97□□□□□ -2.09
HRD3Q05787 YBL012CYBL012C 402 nt1.97□□□□□ -2.09
HRD3Q05787 YPR097WYPR097W 3222 nt1.97□□□□□ -2.09
HRD3Q05787 ZRG17YNR039C 1818 nt1.96□□□□□ -2.1
HRD3Q05787 ZIP1YDR285W 2628 nt1.96□□□□□ -2.1
HRD3Q05787 NAM7YMR080C 2916 nt1.96□□□□□ -2.1
HRD3Q05787 YDL185C-AYDL185C-A 228 nt1.96□□□□□ -2.1
HRD3Q05787 YGR151CYGR151C 336 nt1.96□□□□□ -2.1
HRD3Q05787 YKR075W-AYKR075W-A 270 nt1.96□□□□□ -2.1
HRD3Q05787 VPS54YDR027C 2670 nt1.95□□□□□ -2.1
HRD3Q05787 MPT5YGL178W 2580 nt1.95□□□□□ -2.1
HRD3Q05787 YDR003W-AYDR003W-A 123 nt1.95□□□□□ -2.1
HRD3Q05787 YLR466C-BYLR466C-B 117 nt1.95□□□□□ -2.1
HRD3Q05787 UBP2YOR124C 3819 nt1.95□□□□□ -2.1
HRD3Q05787 ELG1YOR144C 2376 nt1.95□□□□□ -2.1
HRD3Q05787 VPS8YAL002W 3825 nt1.94□□□□□ -2.1
HRD3Q05787 TUS1YLR425W 3924 nt1.94□□□□□ -2.1
HRD3Q05787 SYH1YPL105C 2550 nt1.94□□□□□ -2.1
HRD3Q05787 UBR2YLR024C 5619 nt1.94□□□□□ -2.1
HRD3Q05787 PEP1YBL017C 4740 nt1.94□□□□□ -2.1
HRD3Q05787 SRP14YDL092W 441 nt1.94□□□□□ -2.1
HRD3Q05787 YPR092WYPR092W 306 nt1.94□□□□□ -2.1
HRD3Q05787 FAB1YFR019W 6837 nt1.94□□□□□ -2.1
HRD3Q05787 MAK10YEL053C 2202 nt1.94□□□□□ -2.1
HRD3Q05787 YMR272W-BYMR272W-B 108 nt1.93□□□□□ -2.1
HRD3Q05787 NEO1YIL048W 3456 nt1.93□□□□□ -2.1
HRD3Q05787 FKS1YLR342W 5631 nt1.93□□□□□ -2.1
HRD3Q05787 RTT101YJL047C 2529 nt1.93□□□□□ -2.1
HRD3Q05787 AI5_ALPHAQ0070 1893 nt1.92□□□□□ -2.1
HRD3Q05787 SAS3YBL052C 2496 nt1.92□□□□□ -2.1
HRD3Q05787 RPL37BYDR500C 267 nt1.92□□□□□ -2.1
HRD3Q05787 YEL014CYEL014C 306 nt1.92□□□□□ -2.1
HRD3Q05787 RRT15YLR162W-A 189 nt1.92□□□□□ -2.1
HRD3Q05787 YOR218CYOR218C 420 nt1.92□□□□□ -2.1
HRD3Q05787 SPC98YNL126W 2541 nt1.92□□□□□ -2.1
HRD3Q05787 FIG2YCR089W 4830 nt1.91□□□□□ -2.1
HRD3Q05787 SEC5YDR166C 2916 nt1.91□□□□□ -2.1
HRD3Q05787 BPH1YCR032W 6504 nt1.91□□□□□ -2.1
HRD3Q05787 MSC6YOR354C 2079 nt1.9□□□□□ -2.1
HRD3Q05787 OLI1Q0130 231 nt1.9□□□□□ -2.11
HRD3Q05787 RPS27BYHR021C 249 nt1.9□□□□□ -2.11
HRD3Q05787 VPS55YJR044C 423 nt1.9□□□□□ -2.11
HRD3Q05787 YOL160WYOL160W 342 nt1.9□□□□□ -2.11
HRD3Q05787 RTT107YHR154W 3213 nt1.9□□□□□ -2.11
HRD3Q05787 USO1YDL058W 5373 nt1.9□□□□□ -2.11
HRD3Q05787 IRE1YHR079C 3348 nt1.89□□□□□ -2.11
HRD3Q05787 NIP100YPL174C 2607 nt1.89□□□□□ -2.11
HRD3Q05787 YBR182C-AYBR182C-A 195 nt1.89□□□□□ -2.11
HRD3Q05787 RLM1YPL089C 2031 nt1.89□□□□□ -2.11
HRD3Q05787 DNF3YMR162C 4971 nt1.89□□□□□ -2.11
HRD3Q05787 RGA1YOR127W 3024 nt1.89□□□□□ -2.11
HRD3Q05787 KIP1YBL063W 3336 nt1.88□□□□□ -2.11
HRD3Q05787 snR74snR74 88 nt1.88□□□□□ -2.11
HRD3Q05787 YER088C-AYER088C-A 324 nt1.88□□□□□ -2.11
HRD3Q05787 YMR242W-AYMR242W-A 90 nt1.88□□□□□ -2.11
HRD3Q05787 YLR422WYLR422W 5799 nt1.88□□□□□ -2.11
HRD3Q05787 ZIP2YGL249W 2115 nt1.88□□□□□ -2.11
HRD3Q05787 HMI1YOL095C 2121 nt1.88□□□□□ -2.11
HRD3Q05787 YCR087C-AYCR087C-A 462 nt1.87□□□□□ -2.11
HRD3Q05787 CTR9YOL145C 3234 nt1.87□□□□□ -2.11
HRD3Q05787 IST2YBR086C 2841 nt1.86□□□□□ -2.11
HRD3Q05787 YDL118WYDL118W 381 nt1.86□□□□□ -2.11
HRD3Q05787 RPL34BYIL052C 366 nt1.86□□□□□ -2.11
HRD3Q05787 YNL338WYNL338W 159 nt1.86□□□□□ -2.11
HRD3Q05787 YOR108C-AYOR108C-A 210 nt1.86□□□□□ -2.11
HRD3Q05787 MLH3YPL164C 2148 nt1.86□□□□□ -2.11
HRD3Q05787 YKU70YMR284W 1809 nt1.86□□□□□ -2.11
HRD3Q05787 HSH155YMR288W 2916 nt1.86□□□□□ -2.11
HRD3Q05787 HER1YOR227W 3741 nt1.86□□□□□ -2.11
HRD3Q05787 CAT2YML042W 2013 nt1.85□□□□□ -2.11
HRD3Q05787 MYO2YOR326W 4725 nt1.85□□□□□ -2.11
HRD3Q05787 FRK1YPL141C 2598 nt1.85□□□□□ -2.11
HRD3Q05787 YJL150WYJL150W 303 nt1.84□□□□□ -2.11
HRD3Q05787 SGF11YPL047W 300 nt1.84□□□□□ -2.11
HRD3Q05787 MSH5YDL154W 2706 nt1.84□□□□□ -2.12
HRD3Q05787 AGC1YPR021C 2709 nt1.83□□□□□ -2.12
HRD3Q05787 MCM10YIL150C 1716 nt1.83□□□□□ -2.12
HRD3Q05787 RAD34YDR314C 2079 nt1.83□□□□□ -2.12
HRD3Q05787 IRC20YLR247C 4671 nt1.83□□□□□ -2.12
HRD3Q05787 YOR376WYOR376W 369 nt1.83□□□□□ -2.12
HRD3Q05787 BUD2YKL092C 3315 nt1.83□□□□□ -2.12
HRD3Q05787 SPO21YOL091W 1830 nt1.82□□□□□ -2.12
HRD3Q05787 MAD1YGL086W 2250 nt1.82□□□□□ -2.12
HRD3Q05787 SPO75YLL005C 2607 nt1.82□□□□□ -2.12
HRD3Q05787 YIR030W-AYIR030W-A 384 nt1.82□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 41.9 ms