Protein–RNA interactions for Protein: Q04121

NHX1, Endosomal/prevacuolar sodium/hydrogen exchanger, yeastyeast

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHX1Q04121 YJL052C-AYJL052C-A 120 nt2.19□□□□□ -2.06
NHX1Q04121 YBL012CYBL012C 402 nt2.19□□□□□ -2.06
NHX1Q04121 SAS3YBL052C 2496 nt2.19□□□□□ -2.06
NHX1Q04121 NPR2YEL062W 1848 nt2.19□□□□□ -2.06
NHX1Q04121 SEC16YPL085W 6588 nt2.19□□□□□ -2.06
NHX1Q04121 ENV11YGR071C 2583 nt2.18□□□□□ -2.06
NHX1Q04121 tF(GAA)QtF(GAA)Q 75 nt2.18□□□□□ -2.06
NHX1Q04121 RGA1YOR127W 3024 nt2.18□□□□□ -2.06
NHX1Q04121 VPS54YDR027C 2670 nt2.18□□□□□ -2.06
NHX1Q04121 YCK3YER123W 1575 nt2.18□□□□□ -2.06
NHX1Q04121 SIR4YDR227W 4077 nt2.17□□□□□ -2.06
NHX1Q04121 CTR9YOL145C 3234 nt2.17□□□□□ -2.06
NHX1Q04121 IRC8YJL051W 2469 nt2.17□□□□□ -2.06
NHX1Q04121 YMR242W-AYMR242W-A 90 nt2.17□□□□□ -2.06
NHX1Q04121 IES4YOR189W 351 nt2.17□□□□□ -2.06
NHX1Q04121 YOR225WYOR225W 330 nt2.17□□□□□ -2.06
NHX1Q04121 ZIP2YGL249W 2115 nt2.17□□□□□ -2.06
NHX1Q04121 INO80YGL150C 4470 nt2.17□□□□□ -2.06
NHX1Q04121 UFD4YKL010C 4452 nt2.16□□□□□ -2.06
NHX1Q04121 YOR108C-AYOR108C-A 210 nt2.16□□□□□ -2.06
NHX1Q04121 MLH3YPL164C 2148 nt2.16□□□□□ -2.06
NHX1Q04121 YOR343W-BYOR343W-B 5313 nt2.16□□□□□ -2.06
NHX1Q04121 APL2YKL135C 2181 nt2.15□□□□□ -2.07
NHX1Q04121 CAT2YML042W 2013 nt2.15□□□□□ -2.07
NHX1Q04121 RLM1YPL089C 2031 nt2.14□□□□□ -2.07
NHX1Q04121 PUT3YKL015W 2940 nt2.14□□□□□ -2.07
NHX1Q04121 PFD1YJL179W 330 nt2.14□□□□□ -2.07
NHX1Q04121 YFR016CYFR016C 3702 nt2.14□□□□□ -2.07
NHX1Q04121 AGC1YPR021C 2709 nt2.14□□□□□ -2.07
NHX1Q04121 HMI1YOL095C 2121 nt2.14□□□□□ -2.07
NHX1Q04121 STH1YIL126W 4080 nt2.13□□□□□ -2.07
NHX1Q04121 RAD34YDR314C 2079 nt2.13□□□□□ -2.07
NHX1Q04121 BRE1YDL074C 2103 nt2.13□□□□□ -2.07
NHX1Q04121 IRE1YHR079C 3348 nt2.13□□□□□ -2.07
NHX1Q04121 TDA9YML081W 3756 nt2.13□□□□□ -2.07
NHX1Q04121 SPO75YLL005C 2607 nt2.12□□□□□ -2.07
NHX1Q04121 YDR182W-AYDR182W-A 204 nt2.12□□□□□ -2.07
NHX1Q04121 RPS27BYHR021C 249 nt2.12□□□□□ -2.07
NHX1Q04121 RPL34BYIL052C 366 nt2.12□□□□□ -2.07
NHX1Q04121 PAM16YJL104W 450 nt2.12□□□□□ -2.07
NHX1Q04121 ATP7YKL016C 525 nt2.12□□□□□ -2.07
NHX1Q04121 DGR1YNL130C-A 147 nt2.12□□□□□ -2.07
NHX1Q04121 YOR302WYOR302W 78 nt2.12□□□□□ -2.07
NHX1Q04121 YCL023CYCL023C 348 nt2.12□□□□□ -2.07
NHX1Q04121 MAD1YGL086W 2250 nt2.12□□□□□ -2.07
NHX1Q04121 TOR1YJR066W 7413 nt2.12□□□□□ -2.07
NHX1Q04121 BUD2YKL092C 3315 nt2.12□□□□□ -2.07
NHX1Q04121 HER1YOR227W 3741 nt2.11□□□□□ -2.07
NHX1Q04121 YDL118WYDL118W 381 nt2.11□□□□□ -2.07
NHX1Q04121 YOR218CYOR218C 420 nt2.11□□□□□ -2.07
NHX1Q04121 YPR092WYPR092W 306 nt2.11□□□□□ -2.07
NHX1Q04121 DGR2YKL121W 2559 nt2.11□□□□□ -2.07
NHX1Q04121 PIG1YLR273C 1947 nt2.11□□□□□ -2.07
NHX1Q04121 RRT15YLR162W-A 189 nt2.1□□□□□ -2.07
NHX1Q04121 YOR011W-AYOR011W-A 207 nt2.1□□□□□ -2.07
NHX1Q04121 HIR3YJR140C 4947 nt2.1□□□□□ -2.07
NHX1Q04121 SEY1YOR165W 2331 nt2.09□□□□□ -2.07
NHX1Q04121 AI5_ALPHAQ0070 1893 nt2.09□□□□□ -2.07
NHX1Q04121 KOG1YHR186C 4674 nt2.09□□□□□ -2.07
NHX1Q04121 YGL007C-AYGL007C-A 87 nt2.08□□□□□ -2.08
NHX1Q04121 NOC3YLR002C 1992 nt2.08□□□□□ -2.08
NHX1Q04121 SPP41YDR464W 4308 nt2.08□□□□□ -2.08
NHX1Q04121 SEC63YOR254C 1992 nt2.07□□□□□ -2.08
NHX1Q04121 Q0032Q0032 291 nt2.07□□□□□ -2.08
NHX1Q04121 YIR044CYIR044C 186 nt2.07□□□□□ -2.08
NHX1Q04121 YJL120WYJL120W 324 nt2.07□□□□□ -2.08
NHX1Q04121 FRK1YPL141C 2598 nt2.07□□□□□ -2.08
NHX1Q04121 SPO21YOL091W 1830 nt2.06□□□□□ -2.08
NHX1Q04121 RPS25BYLR333C 327 nt2.06□□□□□ -2.08
NHX1Q04121 USO1YDL058W 5373 nt2.06□□□□□ -2.08
NHX1Q04121 SEC5YDR166C 2916 nt2.05□□□□□ -2.08
NHX1Q04121 VPS55YJR044C 423 nt2.05□□□□□ -2.08
NHX1Q04121 ATG9YDL149W 2994 nt2.05□□□□□ -2.08
NHX1Q04121 snR74snR74 88 nt2.04□□□□□ -2.08
NHX1Q04121 SGF11YPL047W 300 nt2.04□□□□□ -2.08
NHX1Q04121 YNL144CYNL144C 2223 nt2.03□□□□□ -2.08
NHX1Q04121 YNL198CYNL198C 303 nt2.03□□□□□ -2.08
NHX1Q04121 YBR174CYBR174C 315 nt2.03□□□□□ -2.08
NHX1Q04121 YBR182C-AYBR182C-A 195 nt2.03□□□□□ -2.08
NHX1Q04121 MCM10YIL150C 1716 nt2.03□□□□□ -2.09
NHX1Q04121 MSH6YDR097C 3729 nt2.02□□□□□ -2.09
NHX1Q04121 PDR8YLR266C 2106 nt2.02□□□□□ -2.09
NHX1Q04121 RPL31AYDL075W 342 nt2.02□□□□□ -2.09
NHX1Q04121 YDL185C-AYDL185C-A 228 nt2.02□□□□□ -2.09
NHX1Q04121 ISD11YER048W-A 285 nt2.02□□□□□ -2.09
NHX1Q04121 YIR030W-AYIR030W-A 384 nt2.02□□□□□ -2.09
NHX1Q04121 TOR2YKL203C 7425 nt2.01□□□□□ -2.09
NHX1Q04121 YKU70YMR284W 1809 nt2.01□□□□□ -2.09
NHX1Q04121 PTP2YOR208W 2253 nt2.01□□□□□ -2.09
NHX1Q04121 GYP5YPL249C 2685 nt2.01□□□□□ -2.09
NHX1Q04121 CUL3YGR003W 2235 nt2.01□□□□□ -2.09
NHX1Q04121 YER172C-AYER172C-A 381 nt2.01□□□□□ -2.09
NHX1Q04121 YMR175W-AYMR175W-A 195 nt2.01□□□□□ -2.09
NHX1Q04121 ELG1YOR144C 2376 nt2□□□□□ -2.09
NHX1Q04121 SFB2YNL049C 2631 nt2□□□□□ -2.09
NHX1Q04121 YOR376WYOR376W 369 nt2□□□□□ -2.09
NHX1Q04121 MYO4YAL029C 4416 nt2□□□□□ -2.09
NHX1Q04121 FKS1YLR342W 5631 nt1.99□□□□□ -2.09
NHX1Q04121 OLI1Q0130 231 nt1.99□□□□□ -2.09
NHX1Q04121 YBL008W-AYBL008W-A 240 nt1.99□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 25.3 ms