Protein–RNA interactions for Protein: P39538

UBP12, Ubiquitin carboxyl-terminal hydrolase 12, yeastyeast

Predictions only

Length 1,254 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP12P39538 MVP1YMR004W 1536 nt2.04□□□□□ -2.08
UBP12P39538 COA6YMR244C-A 315 nt2.04□□□□□ -2.08
UBP12P39538 SKI3YPR189W 4299 nt2.03□□□□□ -2.08
UBP12P39538 CTF4YPR135W 2784 nt2.03□□□□□ -2.08
UBP12P39538 YOL160WYOL160W 342 nt2.03□□□□□ -2.08
UBP12P39538 YMR045CYMR045C 5268 nt2.03□□□□□ -2.08
UBP12P39538 PKH3YDR466W 2697 nt2.03□□□□□ -2.09
UBP12P39538 YGL149WYGL149W 306 nt2.02□□□□□ -2.09
UBP12P39538 EMC5YIL027C 426 nt2.02□□□□□ -2.09
UBP12P39538 YJL135WYJL135W 318 nt2.02□□□□□ -2.09
UBP12P39538 YMR290W-AYMR290W-A 348 nt2.02□□□□□ -2.09
UBP12P39538 STE5YDR103W 2754 nt2.02□□□□□ -2.09
UBP12P39538 TBS1YBR150C 3285 nt2.02□□□□□ -2.09
UBP12P39538 GCN2YDR283C 4980 nt2.01□□□□□ -2.09
UBP12P39538 AI5_ALPHAQ0070 1893 nt2.01□□□□□ -2.09
UBP12P39538 LRE1YCL051W 1752 nt2□□□□□ -2.09
UBP12P39538 NOC3YLR002C 1992 nt2□□□□□ -2.09
UBP12P39538 SEC5YDR166C 2916 nt2□□□□□ -2.09
UBP12P39538 HTL1YCR020W-B 237 nt2□□□□□ -2.09
UBP12P39538 YFL063WYFL063W 456 nt2□□□□□ -2.09
UBP12P39538 YOR093CYOR093C 4947 nt1.99□□□□□ -2.09
UBP12P39538 ADR1YDR216W 3972 nt1.98□□□□□ -2.09
UBP12P39538 MAD1YGL086W 2250 nt1.98□□□□□ -2.09
UBP12P39538 YDR182W-AYDR182W-A 204 nt1.97□□□□□ -2.09
UBP12P39538 tT(UGU)HtT(UGU)H 72 nt1.97□□□□□ -2.09
UBP12P39538 YIL102CYIL102C 306 nt1.97□□□□□ -2.09
UBP12P39538 YMR175W-AYMR175W-A 195 nt1.97□□□□□ -2.09
UBP12P39538 YMR247W-AYMR247W-A 144 nt1.97□□□□□ -2.09
UBP12P39538 RPL31AYDL075W 342 nt1.96□□□□□ -2.1
UBP12P39538 YDL211CYDL211C 1119 nt1.96□□□□□ -2.1
UBP12P39538 YHR210CYHR210C 1026 nt1.96□□□□□ -2.1
UBP12P39538 YIR044CYIR044C 186 nt1.96□□□□□ -2.1
UBP12P39538 SPO24YPR036W-A 204 nt1.96□□□□□ -2.1
UBP12P39538 OST1YJL002C 1431 nt1.96□□□□□ -2.1
UBP12P39538 MYO2YOR326W 4725 nt1.96□□□□□ -2.1
UBP12P39538 YMR193C-AYMR193C-A 387 nt1.95□□□□□ -2.1
UBP12P39538 UFD2YDL190C 2886 nt1.95□□□□□ -2.1
UBP12P39538 RAD50YNL250W 3939 nt1.95□□□□□ -2.1
UBP12P39538 DNF3YMR162C 4971 nt1.95□□□□□ -2.1
UBP12P39538 DBP6YNR038W 1890 nt1.94□□□□□ -2.1
UBP12P39538 NIP100YPL174C 2607 nt1.94□□□□□ -2.1
UBP12P39538 YOR019WYOR019W 2193 nt1.94□□□□□ -2.1
UBP12P39538 SBE22YHR103W 2559 nt1.94□□□□□ -2.1
UBP12P39538 RAD34YDR314C 2079 nt1.94□□□□□ -2.1
UBP12P39538 YOR376WYOR376W 369 nt1.93□□□□□ -2.1
UBP12P39538 YPR063CYPR063C 423 nt1.93□□□□□ -2.1
UBP12P39538 NCA2YPR155C 1851 nt1.92□□□□□ -2.1
UBP12P39538 CAT8YMR280C 4302 nt1.92□□□□□ -2.1
UBP12P39538 snR65snR65 100 nt1.92□□□□□ -2.1
UBP12P39538 YNL277W-AYNL277W-A 189 nt1.92□□□□□ -2.1
UBP12P39538 YLL054CYLL054C 2532 nt1.92□□□□□ -2.1
UBP12P39538 SLI15YBR156C 2097 nt1.92□□□□□ -2.1
UBP12P39538 KCS1YDR017C 3153 nt1.92□□□□□ -2.1
UBP12P39538 VPS54YDR027C 2670 nt1.91□□□□□ -2.1
UBP12P39538 COF1YLL050C 432 nt1.91□□□□□ -2.1
UBP12P39538 CUL3YGR003W 2235 nt1.91□□□□□ -2.1
UBP12P39538 SCW11YGL028C 1629 nt1.91□□□□□ -2.1
UBP12P39538 NUT1YGL151W 3399 nt1.9□□□□□ -2.1
UBP12P39538 YHL042WYHL042W 453 nt1.9□□□□□ -2.11
UBP12P39538 YIL032CYIL032C 357 nt1.9□□□□□ -2.11
UBP12P39538 SPC98YNL126W 2541 nt1.9□□□□□ -2.11
UBP12P39538 BST1YFL025C 3090 nt1.89□□□□□ -2.11
UBP12P39538 YMR230W-AYMR230W-A 189 nt1.89□□□□□ -2.11
UBP12P39538 YLR035C-AYLR035C-A 3468 nt1.89□□□□□ -2.11
UBP12P39538 YGL217CYGL217C 342 nt1.88□□□□□ -2.11
UBP12P39538 YJL022WYJL022W 309 nt1.88□□□□□ -2.11
UBP12P39538 YLR140WYLR140W 327 nt1.88□□□□□ -2.11
UBP12P39538 CDC31YOR257W 486 nt1.88□□□□□ -2.11
UBP12P39538 AIM44YPL158C 2277 nt1.88□□□□□ -2.11
UBP12P39538 SMC4YLR086W 4257 nt1.88□□□□□ -2.11
UBP12P39538 SPT21YMR179W 2277 nt1.87□□□□□ -2.11
UBP12P39538 ALG13YGL047W 609 nt1.87□□□□□ -2.11
UBP12P39538 CHS1YNL192W 3396 nt1.87□□□□□ -2.11
UBP12P39538 MEC1YBR136W 7107 nt1.86□□□□□ -2.11
UBP12P39538 ALK1YGL021W 2283 nt1.86□□□□□ -2.11
UBP12P39538 PTP2YOR208W 2253 nt1.86□□□□□ -2.11
UBP12P39538 RPL34BYIL052C 366 nt1.86□□□□□ -2.11
UBP12P39538 PFD1YJL179W 330 nt1.86□□□□□ -2.11
UBP12P39538 LCD1YDR499W 2244 nt1.86□□□□□ -2.11
UBP12P39538 SLX4YLR135W 2247 nt1.86□□□□□ -2.11
UBP12P39538 MON2YNL297C 4911 nt1.86□□□□□ -2.11
UBP12P39538 YCS4YLR272C 3531 nt1.86□□□□□ -2.11
UBP12P39538 COG4YPR105C 2586 nt1.85□□□□□ -2.11
UBP12P39538 IRA1YBR140C 9279 nt1.85□□□□□ -2.11
UBP12P39538 YIL115W-AYIL115W-A 372 nt1.85□□□□□ -2.11
UBP12P39538 HMRA2YCR096C 360 nt1.84□□□□□ -2.11
UBP12P39538 YER181CYER181C 324 nt1.84□□□□□ -2.11
UBP12P39538 VPS55YJR044C 423 nt1.84□□□□□ -2.11
UBP12P39538 YML099W-AYML099W-A 330 nt1.84□□□□□ -2.11
UBP12P39538 YCK3YER123W 1575 nt1.84□□□□□ -2.12
UBP12P39538 snR60snR60 104 nt1.83□□□□□ -2.12
UBP12P39538 MSH3YCR092C 3057 nt1.83□□□□□ -2.12
UBP12P39538 PKH2YOL100W 3246 nt1.83□□□□□ -2.12
UBP12P39538 YOR161W-BYOR161W-B 261 nt1.82□□□□□ -2.12
UBP12P39538 KAP122YGL016W 3246 nt1.82□□□□□ -2.12
UBP12P39538 SXM1YDR395W 2835 nt1.81□□□□□ -2.12
UBP12P39538 YLL007CYLL007C 1998 nt1.81□□□□□ -2.12
UBP12P39538 YDR344CYDR344C 444 nt1.81□□□□□ -2.12
UBP12P39538 YOR231C-AYOR231C-A 201 nt1.81□□□□□ -2.12
UBP12P39538 BPH1YCR032W 6504 nt1.81□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms