Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 LAA1YJL207C 6045 nt1.12□□□□□ -2.23
RPB9P27999 FYV8YGR196C 2454 nt1.12□□□□□ -2.23
RPB9P27999 YJR003CYJR003C 1560 nt1.12□□□□□ -2.23
RPB9P27999 SLX4YLR135W 2247 nt1.11□□□□□ -2.23
RPB9P27999 PIK1YNL267W 3201 nt1.11□□□□□ -2.23
RPB9P27999 YGL217CYGL217C 342 nt1.11□□□□□ -2.23
RPB9P27999 YJL015CYJL015C 285 nt1.11□□□□□ -2.23
RPB9P27999 YAL063C-AYAL063C-A 291 nt1.11□□□□□ -2.23
RPB9P27999 RPL40BYKR094C 387 nt1.11□□□□□ -2.23
RPB9P27999 YLR334CYLR334C 381 nt1.11□□□□□ -2.23
RPB9P27999 YPR012WYPR012W 255 nt1.11□□□□□ -2.23
RPB9P27999 TBS1YBR150C 3285 nt1.11□□□□□ -2.23
RPB9P27999 ZIP2YGL249W 2115 nt1.1□□□□□ -2.23
RPB9P27999 APL2YKL135C 2181 nt1.1□□□□□ -2.23
RPB9P27999 YBP1YBR216C 2025 nt1.1□□□□□ -2.23
RPB9P27999 CCH1YGR217W 6120 nt1.1□□□□□ -2.23
RPB9P27999 YAR053WYAR053W 297 nt1.1□□□□□ -2.23
RPB9P27999 YOR029WYOR029W 336 nt1.1□□□□□ -2.23
RPB9P27999 YOR072W-AYOR072W-A 249 nt1.1□□□□□ -2.23
RPB9P27999 VPS54YDR027C 2670 nt1.1□□□□□ -2.23
RPB9P27999 SPC98YNL126W 2541 nt1.1□□□□□ -2.23
RPB9P27999 COG4YPR105C 2586 nt1.09□□□□□ -2.23
RPB9P27999 YDR169C-AYDR169C-A 150 nt1.09□□□□□ -2.23
RPB9P27999 tV(UAC)BtV(UAC)B 74 nt1.09□□□□□ -2.23
RPB9P27999 tV(UAC)DtV(UAC)D 74 nt1.09□□□□□ -2.23
RPB9P27999 YMR175W-AYMR175W-A 195 nt1.09□□□□□ -2.23
RPB9P27999 AIM44YPL158C 2277 nt1.09□□□□□ -2.24
RPB9P27999 HKR1YDR420W 5409 nt1.09□□□□□ -2.24
RPB9P27999 AZF1YOR113W 2745 nt1.09□□□□□ -2.24
RPB9P27999 SCW11YGL028C 1629 nt1.08□□□□□ -2.24
RPB9P27999 NUP145YGL092W 3954 nt1.08□□□□□ -2.24
RPB9P27999 ATG31YDR022C 591 nt1.08□□□□□ -2.24
RPB9P27999 YDR182W-AYDR182W-A 204 nt1.08□□□□□ -2.24
RPB9P27999 YGR035CYGR035C 351 nt1.08□□□□□ -2.24
RPB9P27999 VPS55YJR044C 423 nt1.08□□□□□ -2.24
RPB9P27999 YMR242W-AYMR242W-A 90 nt1.08□□□□□ -2.24
RPB9P27999 YOR108C-AYOR108C-A 210 nt1.08□□□□□ -2.24
RPB9P27999 KCS1YDR017C 3153 nt1.08□□□□□ -2.24
RPB9P27999 INP2YMR163C 2118 nt1.07□□□□□ -2.24
RPB9P27999 CDC25YLR310C 4770 nt1.07□□□□□ -2.24
RPB9P27999 snR72snR72 98 nt1.07□□□□□ -2.24
RPB9P27999 NPC2YDL046W 522 nt1.07□□□□□ -2.24
RPB9P27999 YJL135WYJL135W 318 nt1.07□□□□□ -2.24
RPB9P27999 YML007C-AYML007C-A 111 nt1.07□□□□□ -2.24
RPB9P27999 BIL1YOR304C-A 231 nt1.07□□□□□ -2.24
RPB9P27999 YDR426CYDR426C 378 nt1.06□□□□□ -2.24
RPB9P27999 YHL046W-AYHL046W-A 327 nt1.06□□□□□ -2.24
RPB9P27999 YOR199WYOR199W 330 nt1.06□□□□□ -2.24
RPB9P27999 YPL261CYPL261C 309 nt1.06□□□□□ -2.24
RPB9P27999 RIM20YOR275C 1986 nt1.06□□□□□ -2.24
RPB9P27999 CLU1YMR012W 3834 nt1.06□□□□□ -2.24
RPB9P27999 SEC21YNL287W 2808 nt1.06□□□□□ -2.24
RPB9P27999 EST2YLR318W 2655 nt1.05□□□□□ -2.24
RPB9P27999 HMRA1YCR097W 381 nt1.05□□□□□ -2.24
RPB9P27999 YDL211CYDL211C 1119 nt1.05□□□□□ -2.24
RPB9P27999 PCC1YKR095W-A 267 nt1.05□□□□□ -2.24
RPB9P27999 RPL38YLR325C 237 nt1.05□□□□□ -2.24
RPB9P27999 YGR109W-BYGR109W-B 4644 nt1.05□□□□□ -2.24
RPB9P27999 MPT5YGL178W 2580 nt1.04□□□□□ -2.24
RPB9P27999 MAD1YGL086W 2250 nt1.04□□□□□ -2.24
RPB9P27999 YMR290W-AYMR290W-A 348 nt1.04□□□□□ -2.24
RPB9P27999 YBR012CYBR012C 420 nt1.04□□□□□ -2.24
RPB9P27999 YPR002C-AYPR002C-A 198 nt1.04□□□□□ -2.24
RPB9P27999 SPO75YLL005C 2607 nt1.04□□□□□ -2.24
RPB9P27999 ENV11YGR071C 2583 nt1.03□□□□□ -2.24
RPB9P27999 SLI15YBR156C 2097 nt1.03□□□□□ -2.24
RPB9P27999 TTI1YKL033W 3117 nt1.03□□□□□ -2.24
RPB9P27999 YLR419WYLR419W 4308 nt1.03□□□□□ -2.24
RPB9P27999 snR56snR56 88 nt1.03□□□□□ -2.24
RPB9P27999 RPS20YHL015W 366 nt1.03□□□□□ -2.24
RPB9P27999 YOL160WYOL160W 342 nt1.03□□□□□ -2.24
RPB9P27999 KAP122YGL016W 3246 nt1.03□□□□□ -2.24
RPB9P27999 tQ(UUG)E2tQ(UUG)E2 72 nt1.02□□□□□ -2.25
RPB9P27999 tW(UCA)QtW(UCA)Q 74 nt1.02□□□□□ -2.25
RPB9P27999 YOR161W-BYOR161W-B 261 nt1.02□□□□□ -2.25
RPB9P27999 snR14snR14 160 nt1.02□□□□□ -2.25
RPB9P27999 PBY1YBR094W 2262 nt1.02□□□□□ -2.25
RPB9P27999 SPT21YMR179W 2277 nt1.01□□□□□ -2.25
RPB9P27999 LCD1YDR499W 2244 nt1.01□□□□□ -2.25
RPB9P27999 CDC36YDL165W 576 nt1.01□□□□□ -2.25
RPB9P27999 YHR175W-AYHR175W-A 150 nt1.01□□□□□ -2.25
RPB9P27999 YPR197CYPR197C 564 nt1.01□□□□□ -2.25
RPB9P27999 YSY6YBR162W-A 198 nt1.01□□□□□ -2.25
RPB9P27999 FIG4YNL325C 2640 nt1.01□□□□□ -2.25
RPB9P27999 CSN9YDR179C 489 nt1□□□□□ -2.25
RPB9P27999 YPR016W-AYPR016W-A 261 nt1□□□□□ -2.25
RPB9P27999 SIP4YJL089W 2490 nt1□□□□□ -2.25
RPB9P27999 NUT1YGL151W 3399 nt1□□□□□ -2.25
RPB9P27999 MMS4YBR098W 2076 nt1□□□□□ -2.25
RPB9P27999 RSM22YKL155C 1887 nt0.99□□□□□ -2.25
RPB9P27999 PKH2YOL100W 3246 nt0.99□□□□□ -2.25
RPB9P27999 GIM4YEL003W 336 nt0.99□□□□□ -2.25
RPB9P27999 NUP188YML103C 4968 nt0.99□□□□□ -2.25
RPB9P27999 CUL3YGR003W 2235 nt0.99□□□□□ -2.25
RPB9P27999 RAD34YDR314C 2079 nt0.98□□□□□ -2.25
RPB9P27999 YLL020CYLL020C 306 nt0.98□□□□□ -2.25
RPB9P27999 YPL038W-AYPL038W-A 192 nt0.98□□□□□ -2.25
RPB9P27999 GPG1YGL121C 381 nt0.97□□□□□ -2.25
RPB9P27999 MAM33YIL070C 801 nt0.97□□□□□ -2.25
RPB9P27999 YIR044CYIR044C 186 nt0.97□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 62.2 ms