Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 tF(GAA)P1tF(GAA)P1 73 nt0.88□□□□□ -2.27
VPS3P23643 tF(GAA)P2tF(GAA)P2 73 nt0.88□□□□□ -2.27
VPS3P23643 RPF1YHR088W 888 nt0.88□□□□□ -2.27
VPS3P23643 NFU1YKL040C 771 nt0.88□□□□□ -2.27
VPS3P23643 MRPL31YKL138C 396 nt0.88□□□□□ -2.27
VPS3P23643 YBR076C-AYBR076C-A 267 nt0.88□□□□□ -2.27
VPS3P23643 YDL158CYDL158C 309 nt0.87□□□□□ -2.27
VPS3P23643 YIL059CYIL059C 366 nt0.87□□□□□ -2.27
VPS3P23643 YIL066W-AYIL066W-A 444 nt0.87□□□□□ -2.27
VPS3P23643 YOR072W-AYOR072W-A 249 nt0.87□□□□□ -2.27
VPS3P23643 ALY2YJL084C 3141 nt0.87□□□□□ -2.27
VPS3P23643 YDR269CYDR269C 324 nt0.86□□□□□ -2.27
VPS3P23643 YOR032W-AYOR032W-A 201 nt0.86□□□□□ -2.27
VPS3P23643 NUP157YER105C 4176 nt0.86□□□□□ -2.27
VPS3P23643 SLY1YDR189W 2001 nt0.86□□□□□ -2.27
VPS3P23643 SLD3YGL113W 2007 nt0.86□□□□□ -2.27
VPS3P23643 YPR117WYPR117W 7470 nt0.86□□□□□ -2.27
VPS3P23643 AIM44YPL158C 2277 nt0.85□□□□□ -2.27
VPS3P23643 CYC7YEL039C 342 nt0.85□□□□□ -2.27
VPS3P23643 RPL16AYIL133C 600 nt0.85□□□□□ -2.27
VPS3P23643 FIG4YNL325C 2640 nt0.85□□□□□ -2.27
VPS3P23643 YPR153WYPR153W 423 nt0.85□□□□□ -2.27
VPS3P23643 STO1YMR125W 2586 nt0.84□□□□□ -2.27
VPS3P23643 YER087C-AYER087C-A 552 nt0.84□□□□□ -2.27
VPS3P23643 YHR125WYHR125W 306 nt0.84□□□□□ -2.27
VPS3P23643 YML108WYML108W 318 nt0.84□□□□□ -2.27
VPS3P23643 YPL182CYPL182C 384 nt0.84□□□□□ -2.27
VPS3P23643 YBR200W-AYBR200W-A 165 nt0.84□□□□□ -2.27
VPS3P23643 AIM9YER080W 1884 nt0.84□□□□□ -2.28
VPS3P23643 YDL073WYDL073W 2955 nt0.84□□□□□ -2.28
VPS3P23643 LCD1YDR499W 2244 nt0.83□□□□□ -2.28
VPS3P23643 RRT1YBL048W 312 nt0.83□□□□□ -2.28
VPS3P23643 QCR9YGR183C 201 nt0.82□□□□□ -2.28
VPS3P23643 AIM29YKR074W 468 nt0.82□□□□□ -2.28
VPS3P23643 ISF1YMR081C 1017 nt0.82□□□□□ -2.28
VPS3P23643 YMR141W-AYMR141W-A 225 nt0.82□□□□□ -2.28
VPS3P23643 YOR199WYOR199W 330 nt0.82□□□□□ -2.28
VPS3P23643 NPC2YDL046W 522 nt0.81□□□□□ -2.28
VPS3P23643 WIP1YDR374W-A 270 nt0.81□□□□□ -2.28
VPS3P23643 YEL050W-AYEL050W-A 192 nt0.81□□□□□ -2.28
VPS3P23643 CDC33YOL139C 642 nt0.81□□□□□ -2.28
VPS3P23643 PDE2YOR360C 1581 nt0.81□□□□□ -2.28
VPS3P23643 YMR160WYMR160W 2451 nt0.81□□□□□ -2.28
VPS3P23643 EFR3YMR212C 2349 nt0.81□□□□□ -2.28
VPS3P23643 MMS4YBR098W 2076 nt0.8□□□□□ -2.28
VPS3P23643 SLI15YBR156C 2097 nt0.8□□□□□ -2.28
VPS3P23643 YDL206WYDL206W 2289 nt0.8□□□□□ -2.28
VPS3P23643 RPS27AYKL156W 249 nt0.8□□□□□ -2.28
VPS3P23643 TIM13YGR181W 318 nt0.79□□□□□ -2.28
VPS3P23643 PRP16YKR086W 3216 nt0.79□□□□□ -2.28
VPS3P23643 CMC4YMR194C-B 222 nt0.78□□□□□ -2.28
VPS3P23643 YNL122CYNL122C 348 nt0.78□□□□□ -2.28
VPS3P23643 YCK3YER123W 1575 nt0.78□□□□□ -2.29
VPS3P23643 ZIP2YGL249W 2115 nt0.77□□□□□ -2.29
VPS3P23643 YDL196WYDL196W 330 nt0.77□□□□□ -2.29
VPS3P23643 YHR130CYHR130C 336 nt0.77□□□□□ -2.29
VPS3P23643 YOR192C-CYOR192C-C 237 nt0.77□□□□□ -2.29
VPS3P23643 NHP2YDL208W 471 nt0.76□□□□□ -2.29
VPS3P23643 YDR521WYDR521W 336 nt0.76□□□□□ -2.29
VPS3P23643 BI2Q0110 1272 nt0.76□□□□□ -2.29
VPS3P23643 YKL202WYKL202W 582 nt0.76□□□□□ -2.29
VPS3P23643 YBL071CYBL071C 309 nt0.76□□□□□ -2.29
VPS3P23643 ZEO1YOL109W 342 nt0.76□□□□□ -2.29
VPS3P23643 SEC1YDR164C 2175 nt0.76□□□□□ -2.29
VPS3P23643 YGR290WYGR290W 444 nt0.75□□□□□ -2.29
VPS3P23643 tT(AGU)BtT(AGU)B 73 nt0.75□□□□□ -2.29
VPS3P23643 tT(AGU)CtT(AGU)C 73 nt0.75□□□□□ -2.29
VPS3P23643 tT(AGU)DtT(AGU)D 73 nt0.75□□□□□ -2.29
VPS3P23643 tT(AGU)HtT(AGU)H 73 nt0.75□□□□□ -2.29
VPS3P23643 tT(AGU)I1tT(AGU)I1 73 nt0.75□□□□□ -2.29
VPS3P23643 tT(AGU)I2tT(AGU)I2 73 nt0.75□□□□□ -2.29
VPS3P23643 tT(AGU)JtT(AGU)J 73 nt0.75□□□□□ -2.29
VPS3P23643 tT(AGU)N1tT(AGU)N1 73 nt0.75□□□□□ -2.29
VPS3P23643 tT(AGU)N2tT(AGU)N2 73 nt0.75□□□□□ -2.29
VPS3P23643 tT(AGU)O1tT(AGU)O1 73 nt0.75□□□□□ -2.29
VPS3P23643 tT(AGU)O2tT(AGU)O2 73 nt0.75□□□□□ -2.29
VPS3P23643 RKR1YMR247C 4689 nt0.75□□□□□ -2.29
VPS3P23643 RIM20YOR275C 1986 nt0.74□□□□□ -2.29
VPS3P23643 YDL011CYDL011C 324 nt0.74□□□□□ -2.29
VPS3P23643 YGR042WYGR042W 816 nt0.74□□□□□ -2.29
VPS3P23643 YJL135WYJL135W 318 nt0.74□□□□□ -2.29
VPS3P23643 WAR1YML076C 2835 nt0.73□□□□□ -2.29
VPS3P23643 SWF1YDR126W 1011 nt0.73□□□□□ -2.29
VPS3P23643 YEL030C-AYEL030C-A 315 nt0.73□□□□□ -2.29
VPS3P23643 YJL020W-AYJL020W-A 258 nt0.73□□□□□ -2.29
VPS3P23643 FYV7YLR068W 456 nt0.73□□□□□ -2.29
VPS3P23643 YOR108C-AYOR108C-A 210 nt0.73□□□□□ -2.29
VPS3P23643 YAL016C-BYAL016C-B 186 nt0.72□□□□□ -2.29
VPS3P23643 YLR171WYLR171W 390 nt0.72□□□□□ -2.29
VPS3P23643 YLR287CYLR287C 1068 nt0.72□□□□□ -2.29
VPS3P23643 RPB10YOR210W 213 nt0.72□□□□□ -2.29
VPS3P23643 snR54snR54 86 nt0.72□□□□□ -2.29
VPS3P23643 MYO1YHR023W 5787 nt0.72□□□□□ -2.29
VPS3P23643 PAN2YGL094C 3348 nt0.72□□□□□ -2.29
VPS3P23643 snR72snR72 98 nt0.71□□□□□ -2.3
VPS3P23643 YMR290W-AYMR290W-A 348 nt0.71□□□□□ -2.3
VPS3P23643 YOL014WYOL014W 375 nt0.71□□□□□ -2.3
VPS3P23643 LOA1YPR139C 903 nt0.71□□□□□ -2.3
VPS3P23643 YPR159C-AYPR159C-A 102 nt0.71□□□□□ -2.3
VPS3P23643 DIE2YGR227W 1578 nt0.7□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 57.8 ms