Protein–RNA interactions for Protein: Q9Y2Q0

ATP8A1, Phospholipid-transporting ATPase IA, humanhuman

Predictions only

Length 1,164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP8A1Q9Y2Q0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 AC090192.1-201ENST00000517740 490 ntBASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP8A1Q9Y2Q0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
ATP8A1Q9Y2Q0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
ATP8A1Q9Y2Q0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATP8A1Q9Y2Q0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP8A1Q9Y2Q0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP8A1Q9Y2Q0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.14■□□□□ 0.98
ATP8A1Q9Y2Q0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATP8A1Q9Y2Q0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 AC073111.5-205ENST00000641717 521 ntBASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP8A1Q9Y2Q0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP8A1Q9Y2Q0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP8A1Q9Y2Q0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP8A1Q9Y2Q0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP8A1Q9Y2Q0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATP8A1Q9Y2Q0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ATP8A1Q9Y2Q0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP8A1Q9Y2Q0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP8A1Q9Y2Q0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP8A1Q9Y2Q0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.13■□□□□ 0.97
ATP8A1Q9Y2Q0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP8A1Q9Y2Q0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 CDCA4P2-201ENST00000441182 718 ntBASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 AC245052.3-201ENST00000450182 901 ntBASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 AC243732.1-201ENST00000612648 864 ntBASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 RBM17P2-201ENST00000616397 1405 ntBASIC21.12■□□□□ 0.97
ATP8A1Q9Y2Q0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.11■□□□□ 0.97
ATP8A1Q9Y2Q0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ATP8A1Q9Y2Q0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP8A1Q9Y2Q0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.1■□□□□ 0.97
ATP8A1Q9Y2Q0 AC011484.1-201ENST00000377652 1995 ntBASIC21.1■□□□□ 0.97
ATP8A1Q9Y2Q0 SMG8-203ENST00000578922 2178 ntBASIC21.1■□□□□ 0.97
ATP8A1Q9Y2Q0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP8A1Q9Y2Q0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP8A1Q9Y2Q0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP8A1Q9Y2Q0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms