Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 YDR034C-AYDR034C-A 177 nt2.91□□□□□ -1.94
TY1A-MR1Q04215 YDR354C-AYDR354C-A 144 nt2.91□□□□□ -1.94
TY1A-MR1Q04215 YGL182CYGL182C 324 nt2.91□□□□□ -1.94
TY1A-MR1Q04215 YIL002W-AYIL002W-A 210 nt2.91□□□□□ -1.94
TY1A-MR1Q04215 YLR154C-HYLR154C-H 132 nt2.91□□□□□ -1.94
TY1A-MR1Q04215 YLR156C-AYLR156C-A 132 nt2.91□□□□□ -1.94
TY1A-MR1Q04215 YLR157C-CYLR157C-C 132 nt2.91□□□□□ -1.94
TY1A-MR1Q04215 YLR159C-AYLR159C-A 132 nt2.91□□□□□ -1.94
TY1A-MR1Q04215 RRP6YOR001W 2202 nt2.91□□□□□ -1.94
TY1A-MR1Q04215 PDR8YLR266C 2106 nt2.9□□□□□ -1.94
TY1A-MR1Q04215 SET1YHR119W 3243 nt2.9□□□□□ -1.94
TY1A-MR1Q04215 YMR242W-AYMR242W-A 90 nt2.9□□□□□ -1.95
TY1A-MR1Q04215 CIN8YEL061C 3003 nt2.9□□□□□ -1.95
TY1A-MR1Q04215 TAE2YPL009C 3117 nt2.89□□□□□ -1.95
TY1A-MR1Q04215 ENA2YDR039C 3276 nt2.89□□□□□ -1.95
TY1A-MR1Q04215 ENA1YDR040C 3276 nt2.89□□□□□ -1.95
TY1A-MR1Q04215 STB4YMR019W 2850 nt2.89□□□□□ -1.95
TY1A-MR1Q04215 KAP123YER110C 3342 nt2.89□□□□□ -1.95
TY1A-MR1Q04215 IES6YEL044W 501 nt2.89□□□□□ -1.95
TY1A-MR1Q04215 REC8YPR007C 2043 nt2.89□□□□□ -1.95
TY1A-MR1Q04215 YBT1YLL048C 4986 nt2.89□□□□□ -1.95
TY1A-MR1Q04215 IRR1YIL026C 3453 nt2.88□□□□□ -1.95
TY1A-MR1Q04215 NAM7YMR080C 2916 nt2.88□□□□□ -1.95
TY1A-MR1Q04215 YKR075W-AYKR075W-A 270 nt2.88□□□□□ -1.95
TY1A-MR1Q04215 PAU8YAL068C 363 nt2.88□□□□□ -1.95
TY1A-MR1Q04215 PAU18YLL064C 363 nt2.88□□□□□ -1.95
TY1A-MR1Q04215 PAU6YNR076W 363 nt2.88□□□□□ -1.95
TY1A-MR1Q04215 PAU20YOL161C 363 nt2.88□□□□□ -1.95
TY1A-MR1Q04215 snR39BsnR39B 96 nt2.88□□□□□ -1.95
TY1A-MR1Q04215 DNL4YOR005C 2835 nt2.88□□□□□ -1.95
TY1A-MR1Q04215 PRP6YBR055C 2700 nt2.88□□□□□ -1.95
TY1A-MR1Q04215 INP53YOR109W 3324 nt2.87□□□□□ -1.95
TY1A-MR1Q04215 RAD5YLR032W 3510 nt2.87□□□□□ -1.95
TY1A-MR1Q04215 YTA7YGR270W 4140 nt2.87□□□□□ -1.95
TY1A-MR1Q04215 CAT2YML042W 2013 nt2.87□□□□□ -1.95
TY1A-MR1Q04215 SKP2YNL311C 2292 nt2.87□□□□□ -1.95
TY1A-MR1Q04215 STB6YKL072W 2301 nt2.86□□□□□ -1.95
TY1A-MR1Q04215 YME2YMR302C 2553 nt2.86□□□□□ -1.95
TY1A-MR1Q04215 TFC1YBR123C 1950 nt2.85□□□□□ -1.95
TY1A-MR1Q04215 YOR108C-AYOR108C-A 210 nt2.85□□□□□ -1.95
TY1A-MR1Q04215 YMR317WYMR317W 3423 nt2.85□□□□□ -1.95
TY1A-MR1Q04215 CHS2YBR038W 2892 nt2.85□□□□□ -1.95
TY1A-MR1Q04215 CRM1YGR218W 3255 nt2.85□□□□□ -1.95
TY1A-MR1Q04215 SPO71YDR104C 3738 nt2.84□□□□□ -1.95
TY1A-MR1Q04215 TTI1YKL033W 3117 nt2.84□□□□□ -1.95
TY1A-MR1Q04215 MAD1YGL086W 2250 nt2.84□□□□□ -1.95
TY1A-MR1Q04215 VMR1YHL035C 4779 nt2.84□□□□□ -1.96
TY1A-MR1Q04215 SPO22YIL073C 2928 nt2.84□□□□□ -1.96
TY1A-MR1Q04215 RPN1YHR027C 2982 nt2.84□□□□□ -1.96
TY1A-MR1Q04215 DUG2YBR281C 2637 nt2.84□□□□□ -1.96
TY1A-MR1Q04215 HMI1YOL095C 2121 nt2.83□□□□□ -1.96
TY1A-MR1Q04215 PTP2YOR208W 2253 nt2.83□□□□□ -1.96
TY1A-MR1Q04215 YJL026C-AYJL026C-A 222 nt2.83□□□□□ -1.96
TY1A-MR1Q04215 YOL083C-AYOL083C-A 141 nt2.83□□□□□ -1.96
TY1A-MR1Q04215 CRS5YOR031W 210 nt2.83□□□□□ -1.96
TY1A-MR1Q04215 snR53snR53 91 nt2.83□□□□□ -1.96
TY1A-MR1Q04215 YHR080CYHR080C 4038 nt2.83□□□□□ -1.96
TY1A-MR1Q04215 SRO77YBL106C 3033 nt2.83□□□□□ -1.96
TY1A-MR1Q04215 AFI1YOR129C 2682 nt2.83□□□□□ -1.96
TY1A-MR1Q04215 IFH1YLR223C 3258 nt2.82□□□□□ -1.96
TY1A-MR1Q04215 DRS2YAL026C 4068 nt2.82□□□□□ -1.96
TY1A-MR1Q04215 STT4YLR305C 5703 nt2.81□□□□□ -1.96
TY1A-MR1Q04215 SAS3YBL052C 2496 nt2.81□□□□□ -1.96
TY1A-MR1Q04215 DGR2YKL121W 2559 nt2.81□□□□□ -1.96
TY1A-MR1Q04215 LHS1YKL073W 2646 nt2.81□□□□□ -1.96
TY1A-MR1Q04215 SWR1YDR334W 4545 nt2.81□□□□□ -1.96
TY1A-MR1Q04215 TSC11YER093C 4293 nt2.8□□□□□ -1.96
TY1A-MR1Q04215 ZRG8YER033C 3231 nt2.8□□□□□ -1.96
TY1A-MR1Q04215 COP1YDL145C 3606 nt2.8□□□□□ -1.96
TY1A-MR1Q04215 YDR186CYDR186C 2634 nt2.79□□□□□ -1.96
TY1A-MR1Q04215 SNC1YAL030W 354 nt2.79□□□□□ -1.96
TY1A-MR1Q04215 ROM1YGR070W 3468 nt2.78□□□□□ -1.96
TY1A-MR1Q04215 KTI11YBL071W-A 249 nt2.78□□□□□ -1.96
TY1A-MR1Q04215 YBR072C-AYBR072C-A 162 nt2.78□□□□□ -1.96
TY1A-MR1Q04215 YIL156W-BYIL156W-B 222 nt2.77□□□□□ -1.97
TY1A-MR1Q04215 TAO3YIL129C 7131 nt2.76□□□□□ -1.97
TY1A-MR1Q04215 COX5BYIL111W 456 nt2.76□□□□□ -1.97
TY1A-MR1Q04215 YLL020CYLL020C 306 nt2.76□□□□□ -1.97
TY1A-MR1Q04215 YBL039C-AYBL039C-A 84 nt2.76□□□□□ -1.97
TY1A-MR1Q04215 YBL071C-BYBL071C-B 99 nt2.76□□□□□ -1.97
TY1A-MR1Q04215 YOR394C-AYOR394C-A 168 nt2.76□□□□□ -1.97
TY1A-MR1Q04215 MLH1YMR167W 2310 nt2.76□□□□□ -1.97
TY1A-MR1Q04215 GCV2YMR189W 3105 nt2.75□□□□□ -1.97
TY1A-MR1Q04215 SPO14YKR031C 5052 nt2.75□□□□□ -1.97
TY1A-MR1Q04215 ARO1YDR127W 4767 nt2.75□□□□□ -1.97
TY1A-MR1Q04215 FYV10YIL097W 1551 nt2.75□□□□□ -1.97
TY1A-MR1Q04215 SAP190YKR028W 3102 nt2.75□□□□□ -1.97
TY1A-MR1Q04215 ATG11YPR049C 3537 nt2.75□□□□□ -1.97
TY1A-MR1Q04215 ENA5YDR038C 3276 nt2.75□□□□□ -1.97
TY1A-MR1Q04215 NEW1YPL226W 3591 nt2.74□□□□□ -1.97
TY1A-MR1Q04215 PHO91YNR013C 2685 nt2.74□□□□□ -1.97
TY1A-MR1Q04215 VPS16YPL045W 2397 nt2.74□□□□□ -1.97
TY1A-MR1Q04215 BUD4YJR092W 4344 nt2.74□□□□□ -1.97
TY1A-MR1Q04215 ENV11YGR071C 2583 nt2.73□□□□□ -1.97
TY1A-MR1Q04215 YCR102W-AYCR102W-A 198 nt2.73□□□□□ -1.97
TY1A-MR1Q04215 YDR521WYDR521W 336 nt2.73□□□□□ -1.97
TY1A-MR1Q04215 RPS22AYJL190C 393 nt2.73□□□□□ -1.97
TY1A-MR1Q04215 APL1YJR005W 2103 nt2.73□□□□□ -1.97
TY1A-MR1Q04215 MGM1YOR211C 2646 nt2.73□□□□□ -1.97
TY1A-MR1Q04215 NOP14YDL148C 2433 nt2.73□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms