Protein–RNA interactions for Protein: P53081

NIF3, NGG1-interacting factor 3, yeastyeast

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIF3P53081 LYS14YDR034C 2373 nt1.06□□□□□ -2.24
NIF3P53081 YGL217CYGL217C 342 nt1.06□□□□□ -2.24
NIF3P53081 CDC33YOL139C 642 nt1.06□□□□□ -2.24
NIF3P53081 TIM18YOR297C 579 nt1.06□□□□□ -2.24
NIF3P53081 MKT1YNL085W 2493 nt1.06□□□□□ -2.24
NIF3P53081 PXA2YKL188C 2562 nt1.05□□□□□ -2.24
NIF3P53081 NUT1YGL151W 3399 nt1.05□□□□□ -2.24
NIF3P53081 YLR146W-AYLR146W-A 189 nt1.05□□□□□ -2.24
NIF3P53081 YMR153C-AYMR153C-A 336 nt1.05□□□□□ -2.24
NIF3P53081 RUF22RUF22 515 nt1.05□□□□□ -2.24
NIF3P53081 YOR161W-BYOR161W-B 261 nt1.05□□□□□ -2.24
NIF3P53081 YLL054CYLL054C 2532 nt1.05□□□□□ -2.24
NIF3P53081 GUP1YGL084C 1683 nt1.04□□□□□ -2.24
NIF3P53081 YDL211CYDL211C 1119 nt1.04□□□□□ -2.24
NIF3P53081 YER087C-AYER087C-A 552 nt1.04□□□□□ -2.24
NIF3P53081 YHL009W-AYHL009W-A 1242 nt1.04□□□□□ -2.24
NIF3P53081 YLR171WYLR171W 390 nt1.04□□□□□ -2.24
NIF3P53081 YSY6YBR162W-A 198 nt1.04□□□□□ -2.24
NIF3P53081 snR54snR54 86 nt1.04□□□□□ -2.24
NIF3P53081 MDS3YGL197W 4464 nt1.03□□□□□ -2.24
NIF3P53081 PIG1YLR273C 1947 nt1.03□□□□□ -2.24
NIF3P53081 SLX4YLR135W 2247 nt1.03□□□□□ -2.24
NIF3P53081 YDR114CYDR114C 303 nt1.03□□□□□ -2.24
NIF3P53081 YPL182CYPL182C 384 nt1.03□□□□□ -2.24
NIF3P53081 SGO1YOR073W 1773 nt1.03□□□□□ -2.24
NIF3P53081 tH(GUG)E1tH(GUG)E1 72 nt1.02□□□□□ -2.25
NIF3P53081 tH(GUG)E2tH(GUG)E2 72 nt1.02□□□□□ -2.25
NIF3P53081 tH(GUG)G1tH(GUG)G1 72 nt1.02□□□□□ -2.25
NIF3P53081 tH(GUG)G2tH(GUG)G2 72 nt1.02□□□□□ -2.25
NIF3P53081 tH(GUG)HtH(GUG)H 72 nt1.02□□□□□ -2.25
NIF3P53081 tH(GUG)KtH(GUG)K 72 nt1.02□□□□□ -2.25
NIF3P53081 tH(GUG)MtH(GUG)M 72 nt1.02□□□□□ -2.25
NIF3P53081 RTR1YER139C 681 nt1.02□□□□□ -2.25
NIF3P53081 YIL066W-AYIL066W-A 444 nt1.02□□□□□ -2.25
NIF3P53081 PHS1YJL097W 654 nt1.02□□□□□ -2.25
NIF3P53081 NUP188YML103C 4968 nt1.02□□□□□ -2.25
NIF3P53081 GAL7YBR018C 1101 nt1.02□□□□□ -2.25
NIF3P53081 GDS1YOR355W 1569 nt1.02□□□□□ -2.25
NIF3P53081 ENV11YGR071C 2583 nt1.02□□□□□ -2.25
NIF3P53081 APL1YJR005W 2103 nt1.01□□□□□ -2.25
NIF3P53081 VPS54YDR027C 2670 nt1.01□□□□□ -2.25
NIF3P53081 YER076W-AYER076W-A 348 nt1.01□□□□□ -2.25
NIF3P53081 ATP19YOL077W-A 207 nt1.01□□□□□ -2.25
NIF3P53081 ZEO1YOL109W 342 nt1.01□□□□□ -2.25
NIF3P53081 NST1YNL091W 3723 nt1.01□□□□□ -2.25
NIF3P53081 SWI6YLR182W 2412 nt1□□□□□ -2.25
NIF3P53081 SPT7YBR081C 3999 nt1□□□□□ -2.25
NIF3P53081 PRE4YFR050C 801 nt1□□□□□ -2.25
NIF3P53081 ECL1YGR146C 636 nt1□□□□□ -2.25
NIF3P53081 YLL020CYLL020C 306 nt1□□□□□ -2.25
NIF3P53081 RPL9BYNL067W 576 nt1□□□□□ -2.25
NIF3P53081 YOR192C-CYOR192C-C 237 nt1□□□□□ -2.25
NIF3P53081 snR14snR14 160 nt1□□□□□ -2.25
NIF3P53081 VAM6YDL077C 3150 nt1□□□□□ -2.25
NIF3P53081 SWI4YER111C 3282 nt1□□□□□ -2.25
NIF3P53081 SPO75YLL005C 2607 nt1□□□□□ -2.25
NIF3P53081 RPL34BYIL052C 366 nt0.99□□□□□ -2.25
NIF3P53081 TOM22YNL131W 459 nt0.99□□□□□ -2.25
NIF3P53081 ERP4YOR016C 624 nt0.99□□□□□ -2.25
NIF3P53081 KIP1YBL063W 3336 nt0.99□□□□□ -2.25
NIF3P53081 RFX1YLR176C 2436 nt0.99□□□□□ -2.25
NIF3P53081 AI5_ALPHAQ0070 1893 nt0.99□□□□□ -2.25
NIF3P53081 NOC3YLR002C 1992 nt0.98□□□□□ -2.25
NIF3P53081 YDR182W-AYDR182W-A 204 nt0.98□□□□□ -2.25
NIF3P53081 NUT2YPR168W 474 nt0.98□□□□□ -2.25
NIF3P53081 YLL032CYLL032C 2478 nt0.98□□□□□ -2.25
NIF3P53081 WIP1YDR374W-A 270 nt0.97□□□□□ -2.25
NIF3P53081 YHL037CYHL037C 402 nt0.97□□□□□ -2.25
NIF3P53081 YIL059CYIL059C 366 nt0.97□□□□□ -2.25
NIF3P53081 YLR101CYLR101C 396 nt0.97□□□□□ -2.25
NIF3P53081 YMR175W-AYMR175W-A 195 nt0.97□□□□□ -2.25
NIF3P53081 YBL071CYBL071C 309 nt0.97□□□□□ -2.25
NIF3P53081 snR41snR41 95 nt0.97□□□□□ -2.25
NIF3P53081 APL2YKL135C 2181 nt0.97□□□□□ -2.25
NIF3P53081 YDR269CYDR269C 324 nt0.96□□□□□ -2.26
NIF3P53081 SPT21YMR179W 2277 nt0.96□□□□□ -2.26
NIF3P53081 CDC39YCR093W 6327 nt0.96□□□□□ -2.26
NIF3P53081 DIE2YGR227W 1578 nt0.96□□□□□ -2.26
NIF3P53081 APL3YBL037W 3078 nt0.95□□□□□ -2.26
NIF3P53081 YDL011CYDL011C 324 nt0.95□□□□□ -2.26
NIF3P53081 TIM13YGR181W 318 nt0.95□□□□□ -2.26
NIF3P53081 RTT102YGR275W 474 nt0.95□□□□□ -2.26
NIF3P53081 MRPL31YKL138C 396 nt0.95□□□□□ -2.26
NIF3P53081 YLR287CYLR287C 1068 nt0.95□□□□□ -2.26
NIF3P53081 UBC7YMR022W 498 nt0.95□□□□□ -2.26
NIF3P53081 PIP2YOR363C 2991 nt0.95□□□□□ -2.26
NIF3P53081 EAF1YDR359C 2949 nt0.94□□□□□ -2.26
NIF3P53081 CYC7YEL039C 342 nt0.94□□□□□ -2.26
NIF3P53081 YER006C-AYER006C-A 318 nt0.94□□□□□ -2.26
NIF3P53081 RPS27AYKL156W 249 nt0.94□□□□□ -2.26
NIF3P53081 SAS3YBL052C 2496 nt0.93□□□□□ -2.26
NIF3P53081 STB6YKL072W 2301 nt0.93□□□□□ -2.26
NIF3P53081 SDH2YLL041C 801 nt0.93□□□□□ -2.26
NIF3P53081 YMR141W-AYMR141W-A 225 nt0.93□□□□□ -2.26
NIF3P53081 EFR3YMR212C 2349 nt0.93□□□□□ -2.26
NIF3P53081 SLY1YDR189W 2001 nt0.93□□□□□ -2.26
NIF3P53081 ALY2YJL084C 3141 nt0.92□□□□□ -2.26
NIF3P53081 MPT5YGL178W 2580 nt0.92□□□□□ -2.26
NIF3P53081 NUP145YGL092W 3954 nt0.92□□□□□ -2.26
NIF3P53081 CBS1YDL069C 690 nt0.92□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 28 ms