Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 YOP1YPR028W 543 nt1.2□□□□□ -2.22
UFD1P53044 SEC5YDR166C 2916 nt1.2□□□□□ -2.22
UFD1P53044 SMC4YLR086W 4257 nt1.2□□□□□ -2.22
UFD1P53044 MAD1YGL086W 2250 nt1.19□□□□□ -2.22
UFD1P53044 SWI6YLR182W 2412 nt1.19□□□□□ -2.22
UFD1P53044 WIP1YDR374W-A 270 nt1.19□□□□□ -2.22
UFD1P53044 SDH7YDR511W 402 nt1.19□□□□□ -2.22
UFD1P53044 RTT102YGR275W 474 nt1.19□□□□□ -2.22
UFD1P53044 YHL009W-AYHL009W-A 1242 nt1.19□□□□□ -2.22
UFD1P53044 YKL063CYKL063C 504 nt1.19□□□□□ -2.22
UFD1P53044 YLR146W-AYLR146W-A 189 nt1.19□□□□□ -2.22
UFD1P53044 HHT1YBR010W 411 nt1.19□□□□□ -2.22
UFD1P53044 PXA2YKL188C 2562 nt1.18□□□□□ -2.22
UFD1P53044 RSM22YKL155C 1887 nt1.18□□□□□ -2.22
UFD1P53044 IRR1YIL026C 3453 nt1.18□□□□□ -2.22
UFD1P53044 TIM13YGR181W 318 nt1.18□□□□□ -2.22
UFD1P53044 YJL022WYJL022W 309 nt1.18□□□□□ -2.22
UFD1P53044 UBC7YMR022W 498 nt1.18□□□□□ -2.22
UFD1P53044 CDC25YLR310C 4770 nt1.18□□□□□ -2.22
UFD1P53044 MLH3YPL164C 2148 nt1.18□□□□□ -2.22
UFD1P53044 RAD9YDR217C 3930 nt1.18□□□□□ -2.22
UFD1P53044 YDR114CYDR114C 303 nt1.17□□□□□ -2.22
UFD1P53044 YIL020C-AYIL020C-A 339 nt1.17□□□□□ -2.22
UFD1P53044 YLR264C-AYLR264C-A 117 nt1.17□□□□□ -2.22
UFD1P53044 YNL324WYNL324W 396 nt1.17□□□□□ -2.22
UFD1P53044 BST1YFL025C 3090 nt1.17□□□□□ -2.22
UFD1P53044 RAD50YNL250W 3939 nt1.16□□□□□ -2.22
UFD1P53044 YDL011CYDL011C 324 nt1.16□□□□□ -2.22
UFD1P53044 PAU2YEL049W 363 nt1.16□□□□□ -2.22
UFD1P53044 YGR042WYGR042W 816 nt1.16□□□□□ -2.22
UFD1P53044 COF1YLL050C 432 nt1.16□□□□□ -2.22
UFD1P53044 YAR047CYAR047C 321 nt1.16□□□□□ -2.22
UFD1P53044 PRM3YPL192C 402 nt1.16□□□□□ -2.22
UFD1P53044 LYS14YDR034C 2373 nt1.16□□□□□ -2.22
UFD1P53044 YJL020W-AYJL020W-A 258 nt1.15□□□□□ -2.23
UFD1P53044 YLR222C-AYLR222C-A 231 nt1.15□□□□□ -2.23
UFD1P53044 MRPL50YNR022C 420 nt1.15□□□□□ -2.23
UFD1P53044 SPO23YBR250W 1572 nt1.15□□□□□ -2.23
UFD1P53044 EFR3YMR212C 2349 nt1.15□□□□□ -2.23
UFD1P53044 MVP1YMR004W 1536 nt1.15□□□□□ -2.23
UFD1P53044 ALK1YGL021W 2283 nt1.14□□□□□ -2.23
UFD1P53044 KAP122YGL016W 3246 nt1.14□□□□□ -2.23
UFD1P53044 PCF11YDR228C 1881 nt1.14□□□□□ -2.23
UFD1P53044 CYC7YEL039C 342 nt1.14□□□□□ -2.23
UFD1P53044 RPS24BYIL069C 408 nt1.14□□□□□ -2.23
UFD1P53044 YSY6YBR162W-A 198 nt1.14□□□□□ -2.23
UFD1P53044 NCA2YPR155C 1851 nt1.14□□□□□ -2.23
UFD1P53044 DGR2YKL121W 2559 nt1.13□□□□□ -2.23
UFD1P53044 YDR269CYDR269C 324 nt1.13□□□□□ -2.23
UFD1P53044 tH(GUG)E1tH(GUG)E1 72 nt1.13□□□□□ -2.23
UFD1P53044 tH(GUG)E2tH(GUG)E2 72 nt1.13□□□□□ -2.23
UFD1P53044 tH(GUG)G1tH(GUG)G1 72 nt1.13□□□□□ -2.23
UFD1P53044 tH(GUG)G2tH(GUG)G2 72 nt1.13□□□□□ -2.23
UFD1P53044 tH(GUG)HtH(GUG)H 72 nt1.13□□□□□ -2.23
UFD1P53044 tH(GUG)KtH(GUG)K 72 nt1.13□□□□□ -2.23
UFD1P53044 tH(GUG)MtH(GUG)M 72 nt1.13□□□□□ -2.23
UFD1P53044 RTR1YER139C 681 nt1.13□□□□□ -2.23
UFD1P53044 VAR1Q0140 1197 nt1.13□□□□□ -2.23
UFD1P53044 YIL059CYIL059C 366 nt1.13□□□□□ -2.23
UFD1P53044 YKL083WYKL083W 615 nt1.13□□□□□ -2.23
UFD1P53044 RPL9BYNL067W 576 nt1.13□□□□□ -2.23
UFD1P53044 YOR376WYOR376W 369 nt1.13□□□□□ -2.23
UFD1P53044 AI5_ALPHAQ0070 1893 nt1.13□□□□□ -2.23
UFD1P53044 SWF1YDR126W 1011 nt1.12□□□□□ -2.23
UFD1P53044 AGA2YGL032C 264 nt1.12□□□□□ -2.23
UFD1P53044 RPL26AYLR344W 384 nt1.12□□□□□ -2.23
UFD1P53044 RFX1YLR176C 2436 nt1.12□□□□□ -2.23
UFD1P53044 UFD2YDL190C 2886 nt1.12□□□□□ -2.23
UFD1P53044 LAA1YJL207C 6045 nt1.12□□□□□ -2.23
UFD1P53044 YAP6YDR259C 1152 nt1.11□□□□□ -2.23
UFD1P53044 YGL217CYGL217C 342 nt1.11□□□□□ -2.23
UFD1P53044 EMC5YIL027C 426 nt1.11□□□□□ -2.23
UFD1P53044 MRPL31YKL138C 396 nt1.11□□□□□ -2.23
UFD1P53044 YLR434CYLR434C 384 nt1.11□□□□□ -2.23
UFD1P53044 YMR141W-AYMR141W-A 225 nt1.11□□□□□ -2.23
UFD1P53044 TIM18YOR297C 579 nt1.11□□□□□ -2.23
UFD1P53044 AIM9YER080W 1884 nt1.11□□□□□ -2.23
UFD1P53044 YGR130CYGR130C 2451 nt1.11□□□□□ -2.23
UFD1P53044 SLX4YLR135W 2247 nt1.11□□□□□ -2.23
UFD1P53044 YNL284C-BYNL284C-B 5268 nt1.1□□□□□ -2.23
UFD1P53044 TRM732YMR259C 4263 nt1.1□□□□□ -2.23
UFD1P53044 YLL032CYLL032C 2478 nt1.1□□□□□ -2.23
UFD1P53044 YHL041WYHL041W 450 nt1.1□□□□□ -2.23
UFD1P53044 RPL40BYKR094C 387 nt1.1□□□□□ -2.23
UFD1P53044 YPL185WYPL185W 396 nt1.1□□□□□ -2.23
UFD1P53044 YPL229WYPL229W 621 nt1.1□□□□□ -2.23
UFD1P53044 YBR285WYBR285W 435 nt1.1□□□□□ -2.23
UFD1P53044 SGO1YOR073W 1773 nt1.1□□□□□ -2.23
UFD1P53044 SLY1YDR189W 2001 nt1.1□□□□□ -2.23
UFD1P53044 SAS3YBL052C 2496 nt1.09□□□□□ -2.23
UFD1P53044 EST2YLR318W 2655 nt1.09□□□□□ -2.23
UFD1P53044 YER079WYER079W 633 nt1.09□□□□□ -2.23
UFD1P53044 YJL015CYJL015C 285 nt1.09□□□□□ -2.23
UFD1P53044 HIT1YJR055W 495 nt1.09□□□□□ -2.23
UFD1P53044 RPL33BYOR234C 324 nt1.09□□□□□ -2.23
UFD1P53044 PIG1YLR273C 1947 nt1.09□□□□□ -2.24
UFD1P53044 YGR174W-AYGR174W-A 87 nt1.08□□□□□ -2.24
UFD1P53044 VPS55YJR044C 423 nt1.08□□□□□ -2.24
UFD1P53044 SDH2YLL041C 801 nt1.08□□□□□ -2.24
UFD1P53044 YML003WYML003W 873 nt1.08□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 40.8 ms