Protein–RNA interactions for Protein: P43321

SMD3, Small nuclear ribonucleoprotein Sm D3, yeastyeast

Known RBP Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD3P43321 AIM29YKR074W 468 nt0.94□□□□□ -2.26
SMD3P43321 CDC33YOL139C 642 nt0.94□□□□□ -2.26
SMD3P43321 snR54snR54 86 nt0.94□□□□□ -2.26
SMD3P43321 PXA2YKL188C 2562 nt0.94□□□□□ -2.26
SMD3P43321 IRR1YIL026C 3453 nt0.93□□□□□ -2.26
SMD3P43321 SLY1YDR189W 2001 nt0.93□□□□□ -2.26
SMD3P43321 YDR008CYDR008C 351 nt0.93□□□□□ -2.26
SMD3P43321 YER084W-AYER084W-A 513 nt0.93□□□□□ -2.26
SMD3P43321 YER087C-AYER087C-A 552 nt0.93□□□□□ -2.26
SMD3P43321 RPL40BYKR094C 387 nt0.93□□□□□ -2.26
SMD3P43321 YBL108WYBL108W 306 nt0.93□□□□□ -2.26
SMD3P43321 YPL182CYPL182C 384 nt0.93□□□□□ -2.26
SMD3P43321 LYS14YDR034C 2373 nt0.93□□□□□ -2.26
SMD3P43321 TBS1YBR150C 3285 nt0.92□□□□□ -2.26
SMD3P43321 EFR3YMR212C 2349 nt0.92□□□□□ -2.26
SMD3P43321 GUP1YGL084C 1683 nt0.92□□□□□ -2.26
SMD3P43321 BI2Q0110 1272 nt0.92□□□□□ -2.26
SMD3P43321 YER135CYER135C 393 nt0.92□□□□□ -2.26
SMD3P43321 FYV7YLR068W 456 nt0.92□□□□□ -2.26
SMD3P43321 RRT15YLR162W-A 189 nt0.92□□□□□ -2.26
SMD3P43321 MUK1YPL070W 1839 nt0.92□□□□□ -2.26
SMD3P43321 SPO23YBR250W 1572 nt0.91□□□□□ -2.26
SMD3P43321 YHL009W-AYHL009W-A 1242 nt0.91□□□□□ -2.26
SMD3P43321 YIL059CYIL059C 366 nt0.91□□□□□ -2.26
SMD3P43321 PHS1YJL097W 654 nt0.91□□□□□ -2.26
SMD3P43321 YLR255CYLR255C 354 nt0.91□□□□□ -2.26
SMD3P43321 RPL32YBL092W 393 nt0.91□□□□□ -2.26
SMD3P43321 YPR063CYPR063C 423 nt0.91□□□□□ -2.26
SMD3P43321 PIG1YLR273C 1947 nt0.9□□□□□ -2.27
SMD3P43321 YGR045CYGR045C 363 nt0.9□□□□□ -2.27
SMD3P43321 YLR171WYLR171W 390 nt0.9□□□□□ -2.27
SMD3P43321 YLR287CYLR287C 1068 nt0.9□□□□□ -2.27
SMD3P43321 LOA1YPR139C 903 nt0.9□□□□□ -2.27
SMD3P43321 NUP188YML103C 4968 nt0.89□□□□□ -2.27
SMD3P43321 MPT5YGL178W 2580 nt0.89□□□□□ -2.27
SMD3P43321 YDR269CYDR269C 324 nt0.89□□□□□ -2.27
SMD3P43321 YIL066W-AYIL066W-A 444 nt0.89□□□□□ -2.27
SMD3P43321 RUF22RUF22 515 nt0.89□□□□□ -2.27
SMD3P43321 ZEO1YOL109W 342 nt0.89□□□□□ -2.27
SMD3P43321 snR41snR41 95 nt0.89□□□□□ -2.27
SMD3P43321 SCW11YGL028C 1629 nt0.89□□□□□ -2.27
SMD3P43321 KAP122YGL016W 3246 nt0.89□□□□□ -2.27
SMD3P43321 SEC3YER008C 4011 nt0.88□□□□□ -2.27
SMD3P43321 RFX1YLR176C 2436 nt0.88□□□□□ -2.27
SMD3P43321 PIP2YOR363C 2991 nt0.88□□□□□ -2.27
SMD3P43321 YER006C-AYER006C-A 318 nt0.88□□□□□ -2.27
SMD3P43321 TIM13YGR181W 318 nt0.88□□□□□ -2.27
SMD3P43321 MRPL31YKL138C 396 nt0.88□□□□□ -2.27
SMD3P43321 YLL020CYLL020C 306 nt0.88□□□□□ -2.27
SMD3P43321 YBL071CYBL071C 309 nt0.88□□□□□ -2.27
SMD3P43321 YOR161W-BYOR161W-B 261 nt0.88□□□□□ -2.27
SMD3P43321 SPT21YMR179W 2277 nt0.88□□□□□ -2.27
SMD3P43321 TRM732YMR259C 4263 nt0.88□□□□□ -2.27
SMD3P43321 SCC2YDR180W 4482 nt0.88□□□□□ -2.27
SMD3P43321 BEM2YER155C 6504 nt0.88□□□□□ -2.27
SMD3P43321 YLL032CYLL032C 2478 nt0.87□□□□□ -2.27
SMD3P43321 RTR1YER139C 681 nt0.87□□□□□ -2.27
SMD3P43321 YHL037CYHL037C 402 nt0.87□□□□□ -2.27
SMD3P43321 NFU1YKL040C 771 nt0.87□□□□□ -2.27
SMD3P43321 snR14snR14 160 nt0.87□□□□□ -2.27
SMD3P43321 NUT2YPR168W 474 nt0.87□□□□□ -2.27
SMD3P43321 MDS3YGL197W 4464 nt0.87□□□□□ -2.27
SMD3P43321 NST1YNL091W 3723 nt0.87□□□□□ -2.27
SMD3P43321 CYC7YEL039C 342 nt0.86□□□□□ -2.27
SMD3P43321 YMR175W-AYMR175W-A 195 nt0.86□□□□□ -2.27
SMD3P43321 TOM22YNL131W 459 nt0.86□□□□□ -2.27
SMD3P43321 RPB10YOR210W 213 nt0.86□□□□□ -2.27
SMD3P43321 FIG4YNL325C 2640 nt0.85□□□□□ -2.27
SMD3P43321 SIP4YJL089W 2490 nt0.85□□□□□ -2.27
SMD3P43321 DIE2YGR227W 1578 nt0.84□□□□□ -2.27
SMD3P43321 APL3YBL037W 3078 nt0.84□□□□□ -2.27
SMD3P43321 UPS1YLR193C 528 nt0.84□□□□□ -2.27
SMD3P43321 MSN5YDR335W 3675 nt0.84□□□□□ -2.28
SMD3P43321 DOP1YDR141C 5097 nt0.84□□□□□ -2.28
SMD3P43321 NUP120YKL057C 3114 nt0.83□□□□□ -2.28
SMD3P43321 EMT1tM(CAU)D 73 nt0.83□□□□□ -2.28
SMD3P43321 EMT5tM(CAU)J1 73 nt0.83□□□□□ -2.28
SMD3P43321 EMT3tM(CAU)J2 73 nt0.83□□□□□ -2.28
SMD3P43321 EMT4tM(CAU)M 73 nt0.83□□□□□ -2.28
SMD3P43321 EMT2tM(CAU)O2 73 nt0.83□□□□□ -2.28
SMD3P43321 tV(UAC)BtV(UAC)B 74 nt0.83□□□□□ -2.28
SMD3P43321 tV(UAC)DtV(UAC)D 74 nt0.83□□□□□ -2.28
SMD3P43321 ZIP2YGL249W 2115 nt0.82□□□□□ -2.28
SMD3P43321 PRE4YFR050C 801 nt0.82□□□□□ -2.28
SMD3P43321 HIT1YJR055W 495 nt0.82□□□□□ -2.28
SMD3P43321 YLR101CYLR101C 396 nt0.82□□□□□ -2.28
SMD3P43321 SMC1YFL008W 3678 nt0.82□□□□□ -2.28
SMD3P43321 SWI4YER111C 3282 nt0.82□□□□□ -2.28
SMD3P43321 YDL011CYDL011C 324 nt0.81□□□□□ -2.28
SMD3P43321 NPC2YDL046W 522 nt0.81□□□□□ -2.28
SMD3P43321 YEL030C-AYEL030C-A 315 nt0.81□□□□□ -2.28
SMD3P43321 YOL159C-AYOL159C-A 273 nt0.81□□□□□ -2.28
SMD3P43321 YOR192C-CYOR192C-C 237 nt0.81□□□□□ -2.28
SMD3P43321 RIM20YOR275C 1986 nt0.81□□□□□ -2.28
SMD3P43321 NUP145YGL092W 3954 nt0.81□□□□□ -2.28
SMD3P43321 MMS4YBR098W 2076 nt0.8□□□□□ -2.28
SMD3P43321 LCD1YDR499W 2244 nt0.8□□□□□ -2.28
SMD3P43321 YDR182W-AYDR182W-A 204 nt0.8□□□□□ -2.28
SMD3P43321 YKL202WYKL202W 582 nt0.8□□□□□ -2.28
SMD3P43321 YAR047CYAR047C 321 nt0.8□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 55.2 ms