Protein–RNA interactions for Protein: P39111

VMA7, V-type proton ATPase subunit F, yeastyeast

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA7P39111 tF(GAA)H2tF(GAA)H2 73 nt0□□□□□ -2.41
VMA7P39111 tF(GAA)MtF(GAA)M 73 nt0□□□□□ -2.41
VMA7P39111 tF(GAA)P1tF(GAA)P1 73 nt0□□□□□ -2.41
VMA7P39111 tF(GAA)P2tF(GAA)P2 73 nt0□□□□□ -2.41
VMA7P39111 YGR042WYGR042W 816 nt0□□□□□ -2.41
VMA7P39111 PSF2YJL072C 642 nt0□□□□□ -2.41
VMA7P39111 ARV1YLR242C 966 nt0□□□□□ -2.41
VMA7P39111 YOR282WYOR282W 321 nt0□□□□□ -2.41
VMA7P39111 HNT1YDL125C 477 nt-0.01□□□□□ -2.41
VMA7P39111 ATC1YDR184C 885 nt-0.01□□□□□ -2.41
VMA7P39111 MET32YDR253C 576 nt-0.01□□□□□ -2.41
VMA7P39111 YOR108C-AYOR108C-A 210 nt-0.02□□□□□ -2.41
VMA7P39111 LOA1YPR139C 903 nt-0.02□□□□□ -2.41
VMA7P39111 YDL152WYDL152W 366 nt-0.03□□□□□ -2.41
VMA7P39111 YDR114CYDR114C 303 nt-0.03□□□□□ -2.41
VMA7P39111 RSM27YGR215W 333 nt-0.03□□□□□ -2.41
VMA7P39111 COX12YLR038C 252 nt-0.03□□□□□ -2.41
VMA7P39111 NOP9YJL010C 2001 nt-0.04□□□□□ -2.42
VMA7P39111 SPO13YHR014W 876 nt-0.04□□□□□ -2.42
VMA7P39111 UPS1YLR193C 528 nt-0.04□□□□□ -2.42
VMA7P39111 GIM5YML094W 492 nt-0.04□□□□□ -2.42
VMA7P39111 15S_rRNA15S_rRNA 1649 nt-0.05□□□□□ -2.42
VMA7P39111 CMS1YLR003C 876 nt-0.05□□□□□ -2.42
VMA7P39111 ATP20YPR020W 348 nt-0.05□□□□□ -2.42
VMA7P39111 SUS1YBR111W-A 291 nt-0.05□□□□□ -2.42
VMA7P39111 snR44snR44 211 nt-0.05□□□□□ -2.42
VMA7P39111 YDR182W-AYDR182W-A 204 nt-0.06□□□□□ -2.42
VMA7P39111 snR13snR13 124 nt-0.06□□□□□ -2.42
VMA7P39111 MLP2YIL149C 5040 nt-0.06□□□□□ -2.42
VMA7P39111 YER038W-AYER038W-A 381 nt-0.07□□□□□ -2.42
VMA7P39111 HUG1YML058W-A 207 nt-0.07□□□□□ -2.42
VMA7P39111 SPO23YBR250W 1572 nt-0.07□□□□□ -2.42
VMA7P39111 ENV11YGR071C 2583 nt-0.08□□□□□ -2.42
VMA7P39111 RPL26AYLR344W 384 nt-0.08□□□□□ -2.42
VMA7P39111 RRT1YBL048W 312 nt-0.08□□□□□ -2.42
VMA7P39111 BIR1YJR089W 2865 nt-0.08□□□□□ -2.42
VMA7P39111 SEC8YPR055W 3198 nt-0.08□□□□□ -2.42
VMA7P39111 PET111YMR257C 2403 nt-0.09□□□□□ -2.42
VMA7P39111 RMD6YEL072W 696 nt-0.09□□□□□ -2.42
VMA7P39111 RPL9AYGL147C 576 nt-0.09□□□□□ -2.42
VMA7P39111 MLP1YKR095W 5628 nt-0.1□□□□□ -2.43
VMA7P39111 VIK1YPL253C 1944 nt-0.1□□□□□ -2.43
VMA7P39111 YLR252WYLR252W 306 nt-0.1□□□□□ -2.43
VMA7P39111 YOR053WYOR053W 342 nt-0.1□□□□□ -2.43
VMA7P39111 STE5YDR103W 2754 nt-0.11□□□□□ -2.43
VMA7P39111 snR79snR79 84 nt-0.11□□□□□ -2.43
VMA7P39111 RUB1YDR139C 234 nt-0.11□□□□□ -2.43
VMA7P39111 SLX9YGR081C 633 nt-0.11□□□□□ -2.43
VMA7P39111 DFG10YIL049W 762 nt-0.11□□□□□ -2.43
VMA7P39111 GPX1YKL026C 504 nt-0.11□□□□□ -2.43
VMA7P39111 YMR158C-AYMR158C-A 138 nt-0.11□□□□□ -2.43
VMA7P39111 DAD1YDR016C 285 nt-0.12□□□□□ -2.43
VMA7P39111 YJL127W-AYJL127W-A 117 nt-0.12□□□□□ -2.43
VMA7P39111 ATG16YMR159C 453 nt-0.12□□□□□ -2.43
VMA7P39111 YOL014WYOL014W 375 nt-0.12□□□□□ -2.43
VMA7P39111 IRC2YDR112W 309 nt-0.13□□□□□ -2.43
VMA7P39111 RCN2YOR220W 798 nt-0.13□□□□□ -2.43
VMA7P39111 PRP5YBR237W 2550 nt-0.14□□□□□ -2.43
VMA7P39111 YHL042WYHL042W 453 nt-0.14□□□□□ -2.43
VMA7P39111 snR59snR59 78 nt-0.15□□□□□ -2.43
VMA7P39111 YER078W-AYER078W-A 165 nt-0.15□□□□□ -2.43
VMA7P39111 SPO11YHL022C 1197 nt-0.15□□□□□ -2.43
VMA7P39111 BIG1YHR101C 1008 nt-0.15□□□□□ -2.43
VMA7P39111 RPS30AYLR287C-A 192 nt-0.15□□□□□ -2.43
VMA7P39111 COX7YMR256C 183 nt-0.15□□□□□ -2.43
VMA7P39111 PKH2YOL100W 3246 nt-0.15□□□□□ -2.43
VMA7P39111 snR84snR84 550 nt-0.16□□□□□ -2.44
VMA7P39111 YDR008CYDR008C 351 nt-0.16□□□□□ -2.44
VMA7P39111 UBC7YMR022W 498 nt-0.16□□□□□ -2.44
VMA7P39111 MRPL50YNR022C 420 nt-0.16□□□□□ -2.44
VMA7P39111 QCR7YDR529C 384 nt-0.17□□□□□ -2.44
VMA7P39111 VMA21YGR105W 234 nt-0.17□□□□□ -2.44
VMA7P39111 PAN3YKL025C 2040 nt-0.17□□□□□ -2.44
VMA7P39111 RPL32YBL092W 393 nt-0.17□□□□□ -2.44
VMA7P39111 snR190snR190 190 nt-0.17□□□□□ -2.44
VMA7P39111 RPC10YHR143W-A 213 nt-0.18□□□□□ -2.44
VMA7P39111 tT(UGU)Q1tT(UGU)Q1 76 nt-0.18□□□□□ -2.44
VMA7P39111 YLR232WYLR232W 348 nt-0.18□□□□□ -2.44
VMA7P39111 YMR153C-AYMR153C-A 336 nt-0.18□□□□□ -2.44
VMA7P39111 TYE7YOR344C 876 nt-0.18□□□□□ -2.44
VMA7P39111 YPR099CYPR099C 357 nt-0.18□□□□□ -2.44
VMA7P39111 FYV10YIL097W 1551 nt-0.19□□□□□ -2.44
VMA7P39111 COG8YML071C 1824 nt-0.19□□□□□ -2.44
VMA7P39111 YDR344CYDR344C 444 nt-0.19□□□□□ -2.44
VMA7P39111 BSC3YLR465C 309 nt-0.19□□□□□ -2.44
VMA7P39111 YPL119C-AYPL119C-A 264 nt-0.19□□□□□ -2.44
VMA7P39111 snR45snR45 172 nt-0.19□□□□□ -2.44
VMA7P39111 NPC2YDL046W 522 nt-0.2□□□□□ -2.44
VMA7P39111 YOR364WYOR364W 369 nt-0.2□□□□□ -2.44
VMA7P39111 YLL032CYLL032C 2478 nt-0.2□□□□□ -2.44
VMA7P39111 YOR192C-BYOR192C-B 5313 nt-0.21□□□□□ -2.44
VMA7P39111 RPL35AYDL191W 363 nt-0.21□□□□□ -2.44
VMA7P39111 YER158W-AYER158W-A 216 nt-0.21□□□□□ -2.44
VMA7P39111 YFR057WYFR057W 456 nt-0.21□□□□□ -2.44
VMA7P39111 YBR071WYBR071W 636 nt-0.21□□□□□ -2.44
VMA7P39111 snR34snR34 203 nt-0.21□□□□□ -2.44
VMA7P39111 CSM4YPL200W 471 nt-0.22□□□□□ -2.44
VMA7P39111 YEL018C-AYEL018C-A 534 nt-0.23□□□□□ -2.45
VMA7P39111 YHR054CYHR054C 1065 nt-0.23□□□□□ -2.45
VMA7P39111 YJR140W-AYJR140W-A 150 nt-0.23□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 25.7 ms