Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 FRE2YKL220C 2136 nt2.66□□□□□ -1.98
PUB1P32588 RCO1YMR075W 2055 nt2.66□□□□□ -1.98
PUB1P32588 NOP10YHR072W-A 177 nt2.66□□□□□ -1.98
PUB1P32588 RGM1YMR182C 636 nt2.66□□□□□ -1.98
PUB1P32588 SLY1YDR189W 2001 nt2.66□□□□□ -1.98
PUB1P32588 YLR278CYLR278C 4026 nt2.65□□□□□ -1.98 RIP-Chip
PUB1P32588 MDV1YJL112W 2145 nt2.65□□□□□ -1.98
PUB1P32588 FMP16YDR070C 282 nt2.65□□□□□ -1.99 RIP-Chip
PUB1P32588 RPL20AYMR242C 519 nt2.65□□□□□ -1.99
PUB1P32588 ENA2YDR039C 3276 nt2.65□□□□□ -1.99 RIP-Chip
PUB1P32588 ENA1YDR040C 3276 nt2.65□□□□□ -1.99 RIP-Chip
PUB1P32588 YIL169CYIL169C 2988 nt2.64□□□□□ -1.99
PUB1P32588 RGC1YPR115W 3252 nt2.64□□□□□ -1.99
PUB1P32588 MOT1YPL082C 5604 nt2.64□□□□□ -1.99
PUB1P32588 YCR038W-AYCR038W-A 126 nt2.64□□□□□ -1.99
PUB1P32588 RPS30BYOR182C 192 nt2.64□□□□□ -1.99
PUB1P32588 YKU80YMR106C 1890 nt2.64□□□□□ -1.99
PUB1P32588 ZIP1YDR285W 2628 nt2.64□□□□□ -1.99
PUB1P32588 YIL082W-AYIL082W-A 4497 nt2.64□□□□□ -1.99
PUB1P32588 UTP14YML093W 2700 nt2.63□□□□□ -1.99
PUB1P32588 YAT2YER024W 2772 nt2.63□□□□□ -1.99
PUB1P32588 PIP2YOR363C 2991 nt2.63□□□□□ -1.99
PUB1P32588 MBB1YJL199C 327 nt2.63□□□□□ -1.99
PUB1P32588 SWI5YDR146C 2130 nt2.63□□□□□ -1.99
PUB1P32588 POM152YMR129W 4014 nt2.63□□□□□ -1.99
PUB1P32588 YPR089WYPR089W 2667 nt2.62□□□□□ -1.99
PUB1P32588 SET1YHR119W 3243 nt2.62□□□□□ -1.99
PUB1P32588 snR81snR81 201 nt2.62□□□□□ -1.99
PUB1P32588 INP52YNL106C 3552 nt2.62□□□□□ -1.99
PUB1P32588 EDS1YBR033W 2760 nt2.61□□□□□ -1.99
PUB1P32588 SKP2YNL311C 2292 nt2.61□□□□□ -1.99
PUB1P32588 PUT3YKL015W 2940 nt2.61□□□□□ -1.99 RIP-Chip
PUB1P32588 snR76snR76 109 nt2.61□□□□□ -1.99
PUB1P32588 YPR203WYPR203W 309 nt2.61□□□□□ -1.99 RIP-Chip
PUB1P32588 PTP3YER075C 2787 nt2.61□□□□□ -1.99
PUB1P32588 KAP104YBR017C 2757 nt2.61□□□□□ -1.99
PUB1P32588 YOR296WYOR296W 3870 nt2.61□□□□□ -1.99
PUB1P32588 MAK21YDR060W 3078 nt2.61□□□□□ -1.99
PUB1P32588 CHS6YJL099W 2241 nt2.61□□□□□ -1.99 RIP-Chip
PUB1P32588 ECM29YHL030W 5607 nt2.6□□□□□ -1.99
PUB1P32588 LYS14YDR034C 2373 nt2.6□□□□□ -1.99
PUB1P32588 SPO71YDR104C 3738 nt2.6□□□□□ -1.99
PUB1P32588 DYN2YDR424C 279 nt2.6□□□□□ -1.99 RIP-Chip
PUB1P32588 YAL067W-AYAL067W-A 228 nt2.6□□□□□ -1.99
PUB1P32588 KSP1YHR082C 3090 nt2.6□□□□□ -1.99
PUB1P32588 ESL1YIL151C 3357 nt2.6□□□□□ -1.99
PUB1P32588 ILS1YBL076C 3219 nt2.6□□□□□ -1.99
PUB1P32588 YGR067CYGR067C 2415 nt2.6□□□□□ -1.99
PUB1P32588 HRD3YLR207W 2502 nt2.6□□□□□ -1.99
PUB1P32588 MMS1YPR164W 4224 nt2.6□□□□□ -1.99 RIP-Chip
PUB1P32588 POL3YDL102W 3294 nt2.59□□□□□ -1.99
PUB1P32588 SEC7YDR170C 6030 nt2.59□□□□□ -2
PUB1P32588 SEC63YOR254C 1992 nt2.58□□□□□ -2
PUB1P32588 STB4YMR019W 2850 nt2.58□□□□□ -2
PUB1P32588 ROG1YGL144C 2058 nt2.57□□□□□ -2
PUB1P32588 SLX4YLR135W 2247 nt2.57□□□□□ -2
PUB1P32588 PSY2YNL201C 2577 nt2.57□□□□□ -2
PUB1P32588 PRP5YBR237W 2550 nt2.57□□□□□ -2
PUB1P32588 RTT10YPL183C 3042 nt2.57□□□□□ -2
PUB1P32588 CYR1YJL005W 6081 nt2.57□□□□□ -2 RIP-Chip
PUB1P32588 MSB2YGR014W 3921 nt2.57□□□□□ -2 RIP-Chip
PUB1P32588 RIC1YLR039C 3171 nt2.57□□□□□ -2
PUB1P32588 VMR1YHL035C 4779 nt2.56□□□□□ -2
PUB1P32588 SLD3YGL113W 2007 nt2.56□□□□□ -2 RIP-Chip
PUB1P32588 ZIP2YGL249W 2115 nt2.56□□□□□ -2
PUB1P32588 SCH9YHR205W 2475 nt2.56□□□□□ -2 RIP-Chip
PUB1P32588 COX12YLR038C 252 nt2.56□□□□□ -2 RIP-Chip
PUB1P32588 SBE22YHR103W 2559 nt2.56□□□□□ -2
PUB1P32588 DNL4YOR005C 2835 nt2.56□□□□□ -2
PUB1P32588 SLH1YGR271W 5904 nt2.56□□□□□ -2
PUB1P32588 SUL1YBR294W 2580 nt2.55□□□□□ -2
PUB1P32588 RAX2YLR084C 3663 nt2.55□□□□□ -2 RIP-Chip
PUB1P32588 SWR1YDR334W 4545 nt2.55□□□□□ -2
PUB1P32588 RPS22AYJL190C 393 nt2.55□□□□□ -2 RIP-Chip
PUB1P32588 TAE2YPL009C 3117 nt2.55□□□□□ -2
PUB1P32588 ROM1YGR070W 3468 nt2.55□□□□□ -2
PUB1P32588 RGA2YDR379W 3030 nt2.55□□□□□ -2
PUB1P32588 RAD5YLR032W 3510 nt2.54□□□□□ -2
PUB1P32588 TAO3YIL129C 7131 nt2.54□□□□□ -2
PUB1P32588 PNC1YGL037C 651 nt2.54□□□□□ -2
PUB1P32588 PAU8YAL068C 363 nt2.54□□□□□ -2
PUB1P32588 PAU18YLL064C 363 nt2.54□□□□□ -2
PUB1P32588 PAU6YNR076W 363 nt2.54□□□□□ -2
PUB1P32588 PAU20YOL161C 363 nt2.54□□□□□ -2
PUB1P32588 YLL054CYLL054C 2532 nt2.54□□□□□ -2
PUB1P32588 SET2YJL168C 2202 nt2.54□□□□□ -2
PUB1P32588 CAT2YML042W 2013 nt2.54□□□□□ -2
PUB1P32588 TSC11YER093C 4293 nt2.53□□□□□ -2
PUB1P32588 RAD34YDR314C 2079 nt2.53□□□□□ -2
PUB1P32588 TFC1YBR123C 1950 nt2.53□□□□□ -2
PUB1P32588 MNL2YLR057W 2550 nt2.53□□□□□ -2
PUB1P32588 YHR131W-AYHR131W-A 246 nt2.53□□□□□ -2
PUB1P32588 SPO22YIL073C 2928 nt2.53□□□□□ -2
PUB1P32588 TOR1YJR066W 7413 nt2.53□□□□□ -2 RIP-Chip
PUB1P32588 PRP6YBR055C 2700 nt2.53□□□□□ -2
PUB1P32588 VAS1YGR094W 3315 nt2.52□□□□□ -2.01
PUB1P32588 YDR354C-AYDR354C-A 144 nt2.52□□□□□ -2.01
PUB1P32588 YDR371C-AYDR371C-A 105 nt2.52□□□□□ -2.01
PUB1P32588 ECM21YBL101C 3354 nt2.52□□□□□ -2.01
PUB1P32588 YPL216WYPL216W 3309 nt2.52□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 51.3 ms