Protein–RNA interactions for Protein: P21771

MRPS28, 37S ribosomal protein S28, mitochondrial, yeast

Predictions only

Length 286 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	P21771	PAU24	YBR301W	363 nt		0.86	□□□□□ -2.27
MRPS28	P21771	APL3	YBL037W	3078 nt		0.86	□□□□□ -2.27
MRPS28	P21771	SNU56	YDR240C	1479 nt		0.86	□□□□□ -2.27
MRPS28	P21771	HUR1	YGL168W	333 nt		0.85	□□□□□ -2.27
MRPS28	P21771	YOR161W-B	YOR161W-B	261 nt		0.85	□□□□□ -2.27
MRPS28	P21771	GDS1	YOR355W	1569 nt		0.85	□□□□□ -2.27
MRPS28	P21771	SVS1	YPL163C	783 nt		0.85	□□□□□ -2.27
MRPS28	P21771	YLL054C	YLL054C	2532 nt		0.84	□□□□□ -2.27
MRPS28	P21771	SPO23	YBR250W	1572 nt		0.84	□□□□□ -2.27
MRPS28	P21771	ENV11	YGR071C	2583 nt		0.84	□□□□□ -2.27
MRPS28	P21771	NUP145	YGL092W	3954 nt		0.84	□□□□□ -2.27
MRPS28	P21771	YPR117W	YPR117W	7470 nt		0.84	□□□□□ -2.28
MRPS28	P21771	PIG1	YLR273C	1947 nt		0.83	□□□□□ -2.28
MRPS28	P21771	YDR029W	YDR029W	315 nt		0.83	□□□□□ -2.28
MRPS28	P21771	YKL123W	YKL123W	381 nt		0.83	□□□□□ -2.28
MRPS28	P21771	YMR242W-A	YMR242W-A	90 nt		0.83	□□□□□ -2.28
MRPS28	P21771	RPL9B	YNL067W	576 nt		0.83	□□□□□ -2.28
MRPS28	P21771	YBR071W	YBR071W	636 nt		0.83	□□□□□ -2.28
MRPS28	P21771	MKT1	YNL085W	2493 nt		0.83	□□□□□ -2.28
MRPS28	P21771	TOF2	YKR010C	2316 nt		0.83	□□□□□ -2.28
MRPS28	P21771	CLU1	YMR012W	3834 nt		0.83	□□□□□ -2.28
MRPS28	P21771	APL2	YKL135C	2181 nt		0.83	□□□□□ -2.28
MRPS28	P21771	YER023C-A	YER023C-A	213 nt		0.82	□□□□□ -2.28
MRPS28	P21771	ILM1	YJR118C	612 nt		0.82	□□□□□ -2.28
MRPS28	P21771	RCN2	YOR220W	798 nt		0.82	□□□□□ -2.28
MRPS28	P21771	SPT21	YMR179W	2277 nt		0.82	□□□□□ -2.28
MRPS28	P21771	LYS14	YDR034C	2373 nt		0.82	□□□□□ -2.28
MRPS28	P21771	KAP120	YPL125W	3099 nt		0.81	□□□□□ -2.28
MRPS28	P21771	PXA2	YKL188C	2562 nt		0.81	□□□□□ -2.28
MRPS28	P21771	PAM16	YJL104W	450 nt		0.81	□□□□□ -2.28
MRPS28	P21771	NUT2	YPR168W	474 nt		0.81	□□□□□ -2.28
MRPS28	P21771	ZIP1	YDR285W	2628 nt		0.81	□□□□□ -2.28
MRPS28	P21771	YGR025W	YGR025W	303 nt		0.8	□□□□□ -2.28
MRPS28	P21771	YHR139C-A	YHR139C-A	312 nt		0.8	□□□□□ -2.28
MRPS28	P21771	APQ13	YJL075C	417 nt		0.8	□□□□□ -2.28
MRPS28	P21771	RPL32	YBL092W	393 nt		0.8	□□□□□ -2.28
MRPS28	P21771	YDR182W-A	YDR182W-A	204 nt		0.79	□□□□□ -2.28
MRPS28	P21771	STF2	YGR008C	255 nt		0.79	□□□□□ -2.28
MRPS28	P21771	YMR153C-A	YMR153C-A	336 nt		0.79	□□□□□ -2.28
MRPS28	P21771	YMR175W-A	YMR175W-A	195 nt		0.79	□□□□□ -2.28
MRPS28	P21771	RUF22	RUF22	515 nt		0.79	□□□□□ -2.28
MRPS28	P21771	YOR029W	YOR029W	336 nt		0.79	□□□□□ -2.28
MRPS28	P21771	snR13	snR13	124 nt		0.79	□□□□□ -2.28
MRPS28	P21771	YDR114C	YDR114C	303 nt		0.78	□□□□□ -2.28
MRPS28	P21771	MET32	YDR253C	576 nt		0.78	□□□□□ -2.28
MRPS28	P21771	YAP3	YHL009C	993 nt		0.78	□□□□□ -2.28
MRPS28	P21771	NOC3	YLR002C	1992 nt		0.77	□□□□□ -2.29
MRPS28	P21771	YGR045C	YGR045C	363 nt		0.77	□□□□□ -2.29
MRPS28	P21771	NBL1	YHR199C-A	222 nt		0.77	□□□□□ -2.29
MRPS28	P21771	YML009C-A	YML009C-A	327 nt		0.77	□□□□□ -2.29
MRPS28	P21771	IRC23	YOR044W	474 nt		0.77	□□□□□ -2.29
MRPS28	P21771	YDL073W	YDL073W	2955 nt		0.77	□□□□□ -2.29
MRPS28	P21771	SET3	YKR029C	2256 nt		0.76	□□□□□ -2.29
MRPS28	P21771	YBR221W-A	YBR221W-A	105 nt		0.76	□□□□□ -2.29
MRPS28	P21771	SAS3	YBL052C	2496 nt		0.76	□□□□□ -2.29
MRPS28	P21771	AI5_ALPHA	Q0070	1893 nt		0.75	□□□□□ -2.29
MRPS28	P21771	HMLALPHA2	YCL067C	633 nt		0.75	□□□□□ -2.29
MRPS28	P21771	MATALPHA2	YCR039C	633 nt		0.75	□□□□□ -2.29
MRPS28	P21771	RPL9A	YGL147C	576 nt		0.75	□□□□□ -2.29
MRPS28	P21771	SDH2	YLL041C	801 nt		0.75	□□□□□ -2.29
MRPS28	P21771	YLR146W-A	YLR146W-A	189 nt		0.75	□□□□□ -2.29
MRPS28	P21771	HUG1	YML058W-A	207 nt		0.75	□□□□□ -2.29
MRPS28	P21771	YBR012C	YBR012C	420 nt		0.75	□□□□□ -2.29
MRPS28	P21771	AIM9	YER080W	1884 nt		0.75	□□□□□ -2.29
MRPS28	P21771	MPT5	YGL178W	2580 nt		0.75	□□□□□ -2.29
MRPS28	P21771	YLL032C	YLL032C	2478 nt		0.75	□□□□□ -2.29
MRPS28	P21771	ALY2	YJL084C	3141 nt		0.75	□□□□□ -2.29
MRPS28	P21771	PRP16	YKR086W	3216 nt		0.74	□□□□□ -2.29
MRPS28	P21771	SLD3	YGL113W	2007 nt		0.74	□□□□□ -2.29
MRPS28	P21771	YGL239C	YGL239C	315 nt		0.74	□□□□□ -2.29
MRPS28	P21771	SEC1	YDR164C	2175 nt		0.74	□□□□□ -2.29
MRPS28	P21771	COG4	YPR105C	2586 nt		0.74	□□□□□ -2.29
MRPS28	P21771	NUP157	YER105C	4176 nt		0.74	□□□□□ -2.29
MRPS28	P21771	YMR272W-A	YMR272W-A	114 nt		0.73	□□□□□ -2.29
MRPS28	P21771	RFX1	YLR176C	2436 nt		0.73	□□□□□ -2.29
MRPS28	P21771	SCW11	YGL028C	1629 nt		0.72	□□□□□ -2.29
MRPS28	P21771	URM1	YIL008W	300 nt		0.72	□□□□□ -2.29
MRPS28	P21771	UPS1	YLR193C	528 nt		0.72	□□□□□ -2.29
MRPS28	P21771	GPI15	YNL038W	690 nt		0.72	□□□□□ -2.29
MRPS28	P21771	TSC3	YBR058C-A	243 nt		0.72	□□□□□ -2.29
MRPS28	P21771	UBP3	YER151C	2739 nt		0.72	□□□□□ -2.29
MRPS28	P21771	NHP2	YDL208W	471 nt		0.71	□□□□□ -2.3
MRPS28	P21771	CYC7	YEL039C	342 nt		0.71	□□□□□ -2.3
MRPS28	P21771	MXR1	YER042W	555 nt		0.71	□□□□□ -2.3
MRPS28	P21771	YER076W-A	YER076W-A	348 nt		0.71	□□□□□ -2.3
MRPS28	P21771	PHS1	YJL097W	654 nt		0.71	□□□□□ -2.3
MRPS28	P21771	STE18	YJR086W	333 nt		0.71	□□□□□ -2.3
MRPS28	P21771	NFU1	YKL040C	771 nt		0.71	□□□□□ -2.3
MRPS28	P21771	MRPL31	YKL138C	396 nt		0.71	□□□□□ -2.3
MRPS28	P21771	PAC1	YOR269W	1485 nt		0.71	□□□□□ -2.3
MRPS28	P21771	YCR001W	YCR001W	315 nt		0.7	□□□□□ -2.3
MRPS28	P21771	BIG1	YHR101C	1008 nt		0.7	□□□□□ -2.3
MRPS28	P21771	YLR269C	YLR269C	351 nt		0.7	□□□□□ -2.3
MRPS28	P21771	STO1	YMR125W	2586 nt		0.7	□□□□□ -2.3
MRPS28	P21771	SLY1	YDR189W	2001 nt		0.69	□□□□□ -2.3
MRPS28	P21771	YER084W-A	YER084W-A	513 nt		0.69	□□□□□ -2.3
MRPS28	P21771	YIL066W-A	YIL066W-A	444 nt		0.69	□□□□□ -2.3
MRPS28	P21771	RPL16A	YIL133C	600 nt		0.69	□□□□□ -2.3
MRPS28	P21771	YNR025C	YNR025C	360 nt		0.69	□□□□□ -2.3
MRPS28	P21771	YDR269C	YDR269C	324 nt		0.68	□□□□□ -2.3

Retrieved 100 of 7,029 protein–RNA pairs in 47.9 ms