Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 AP004607.7-201ENST00000527152 1677 ntBASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 AC020916.1-201ENST00000587762 1774 ntBASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 NOC2LP1-202ENST00000452600 2235 ntBASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV8-6A0A0B4J262 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 IRS3P-201ENST00000223076 1006 ntBASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 AC105265.2-201ENST00000467189 838 ntBASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 AL354811.1-201ENST00000610286 706 ntBASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV8-6A0A0B4J262 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 AP005212.1-201ENST00000581547 1997 ntBASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 AL358852.1-201ENST00000623174 1268 ntBASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-6A0A0B4J262 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms