RNA–Protein interactions for RNA: ENST00000302909.3

KCNK3-201, Transcript of potassium two pore domain channel subfamily K member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNK3, Length 6,162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNK3-201ENST00000302909 DCAF8L2P0C7V8 631 aa28.03■■■□□ 2.08
KCNK3-201ENST00000302909 SUPT5HO00267 1087 aaKnown RBP27.93■■■□□ 2.06
KCNK3-201ENST00000302909 PELP1Q8IZL8 1130 aaKnown RBP27.58■■■□□ 2.01
KCNK3-201ENST00000302909 EHMT2Q96KQ7 1210 aa27.58■■■□□ 2.01
KCNK3-201ENST00000302909 PCGF6Q9BYE7 350 aa27.47■■□□□ 1.99
KCNK3-201ENST00000302909 SHROOM4Q9ULL8 1493 aa27.29■■□□□ 1.96
KCNK3-201ENST00000302909 MYT1Q01538 1121 aa27.19■■□□□ 1.94
KCNK3-201ENST00000302909 ERICH6Q7L0X2 663 aa26.92■■□□□ 1.9
KCNK3-201ENST00000302909 CENPBP07199 599 aaPredicted RBP26.92■■□□□ 1.9
KCNK3-201ENST00000302909 TTBK1Q5TCY1 1321 aaPredicted RBP26.81■■□□□ 1.88
KCNK3-201ENST00000302909 YTHDC1Q96MU7 727 aaKnown RBP26.78■■□□□ 1.88
KCNK3-201ENST00000302909 FAM9AQ8IZU1 332 aaPredicted RBP26.46■■□□□ 1.83
KCNK3-201ENST00000302909 HRCP23327 699 aa26.44■■□□□ 1.82
KCNK3-201ENST00000302909 PPARGC1BQ86YN6 1023 aaKnown RBP26.44■■□□□ 1.82
KCNK3-201ENST00000302909 ZEB1P37275 1124 aaPredicted RBP26.42■■□□□ 1.82
KCNK3-201ENST00000302909 CCER1Q8TC90 406 aaPredicted RBP26.38■■□□□ 1.81
KCNK3-201ENST00000302909 NISCHQ9Y2I1 1504 aa26.22■■□□□ 1.79
KCNK3-201ENST00000302909 APLP2Q06481 763 aa25.97■■□□□ 1.75
KCNK3-201ENST00000302909 NEFLP07196 543 aa25.93■■□□□ 1.74
KCNK3-201ENST00000302909 RANGAP1P46060 587 aaPredicted RBP25.74■■□□□ 1.71
KCNK3-201ENST00000302909 TRIM26Q12899 539 aaPredicted RBP25.73■■□□□ 1.71
KCNK3-201ENST00000302909 GTF3C3Q9Y5Q9 886 aa25.64■■□□□ 1.69
KCNK3-201ENST00000302909 TRIM41Q8WV44 630 aa25.47■■□□□ 1.67
KCNK3-201ENST00000302909 LOC105371045A0A1W2PR82 267 aa25.41■■□□□ 1.66
KCNK3-201ENST00000302909 DIEXFQ68CQ4 756 aaKnown RBP25.37■■□□□ 1.65
KCNK3-201ENST00000302909 BCANQ96GW7 911 aa25.31■■□□□ 1.64
KCNK3-201ENST00000302909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.24■■□□□ 1.63
KCNK3-201ENST00000302909 DAXXQ9UER7 740 aaPredicted RBP25.14■■□□□ 1.62
KCNK3-201ENST00000302909 RTL5Q5HYW3 569 aaPredicted RBP25.14■■□□□ 1.62
KCNK3-201ENST00000302909 UBTFP17480 764 aaKnown RBP25.1■■□□□ 1.61
KCNK3-201ENST00000302909 ACIN1Q9UKV3 1341 aaKnown RBP25.09■■□□□ 1.61
KCNK3-201ENST00000302909 ATP1B4Q9UN42 357 aaPredicted RBP25.07■■□□□ 1.6
KCNK3-201ENST00000302909 CNGB1Q14028 1251 aaPredicted RBP24.97■■□□□ 1.59
KCNK3-201ENST00000302909 SCAF1Q9H7N4 1312 aaKnown RBP24.96■■□□□ 1.59
KCNK3-201ENST00000302909 HNRNPUL2Q1KMD3 747 aaKnown RBP24.93■■□□□ 1.58
KCNK3-201ENST00000302909 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
KCNK3-201ENST00000302909 ITGAEP38570 1179 aa24.84■■□□□ 1.57
KCNK3-201ENST00000302909 POLR3GLQ9BT43 218 aa24.79■■□□□ 1.56
KCNK3-201ENST00000302909 ZNF316A6NFI3 1004 aaPredicted RBP24.75■■□□□ 1.55
KCNK3-201ENST00000302909 EIF5BO60841 1220 aaKnown RBP24.72■■□□□ 1.55
KCNK3-201ENST00000302909 NEUROD1Q13562 356 aa24.66■■□□□ 1.54
KCNK3-201ENST00000302909 CDK11AQ9UQ88 783 aaPredicted RBP24.59■■□□□ 1.53
KCNK3-201ENST00000302909 CLSPNQ9HAW4 1339 aa24.4■■□□□ 1.5
KCNK3-201ENST00000302909 NBR1Q14596 966 aa24.37■■□□□ 1.49
KCNK3-201ENST00000302909 FKBP8Q14318 412 aa24.31■■□□□ 1.48
KCNK3-201ENST00000302909 NPM2Q86SE8 214 aaKnown RBP24.31■■□□□ 1.48
KCNK3-201ENST00000302909 BCL11AQ9H165 835 aa24.19■■□□□ 1.46
KCNK3-201ENST00000302909 ANP32AP39687 249 aaKnown RBP24.16■■□□□ 1.46
KCNK3-201ENST00000302909 ANP32EQ9BTT0 268 aa24.12■■□□□ 1.45
KCNK3-201ENST00000302909 ANP32CO43423 234 aa24.11■■□□□ 1.45
KCNK3-201ENST00000302909 GLIPR1L2Q4G1C9 344 aa24■■□□□ 1.43
KCNK3-201ENST00000302909 RTN4Q9NQC3 1192 aaKnown RBP23.96■■□□□ 1.43
KCNK3-201ENST00000302909 ARXQ96QS3 562 aa23.94■■□□□ 1.42
KCNK3-201ENST00000302909 MIER1Q8N108 512 aa23.88■■□□□ 1.41
KCNK3-201ENST00000302909 FAM50AQ14320 339 aaKnown RBP23.87■■□□□ 1.41
KCNK3-201ENST00000302909 IRX6P78412 446 aaPredicted RBP23.87■■□□□ 1.41
KCNK3-201ENST00000302909 SLC4A1APQ9BWU0 796 aaKnown RBP23.79■■□□□ 1.4
KCNK3-201ENST00000302909 MYT1LQ9UL68 1186 aa23.79■■□□□ 1.4
KCNK3-201ENST00000302909 TRIM52Q96A61 297 aa23.76■■□□□ 1.39
KCNK3-201ENST00000302909 ZBTB47Q9UFB7 747 aaPredicted RBP23.74■■□□□ 1.39
KCNK3-201ENST00000302909 DCAF1Q9Y4B6 1507 aa23.66■■□□□ 1.38
KCNK3-201ENST00000302909 HNRNPUQ00839 825 aaKnown RBP eCLIP23.66■■□□□ 1.382e-6■■■□□ 15
KCNK3-201ENST00000302909 ZNF326Q5BKZ1 582 aaKnown RBP23.64■■□□□ 1.38
KCNK3-201ENST00000302909 DDX10Q13206 875 aaKnown RBP23.6■■□□□ 1.37
KCNK3-201ENST00000302909 CANXP27824 592 aaKnown RBP23.54■■□□□ 1.36
KCNK3-201ENST00000302909 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
KCNK3-201ENST00000302909 FAM9BQ8IZU0 186 aa23.53■■□□□ 1.36
KCNK3-201ENST00000302909 CSRNP3Q8WYN3 585 aa23.51■■□□□ 1.35
KCNK3-201ENST00000302909 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.5■■□□□ 1.35
KCNK3-201ENST00000302909 SUPT16HQ9Y5B9 1047 aaKnown RBP23.47■■□□□ 1.35
KCNK3-201ENST00000302909 CCDC136Q96JN2 1154 aa23.46■■□□□ 1.35
KCNK3-201ENST00000302909 ANP32BQ92688 251 aaKnown RBP23.44■■□□□ 1.34
KCNK3-201ENST00000302909 SALL2Q9Y467 1007 aaPredicted RBP23.44■■□□□ 1.34
KCNK3-201ENST00000302909 DEKP35659 375 aaKnown RBP23.43■■□□□ 1.34
KCNK3-201ENST00000302909 LAS1LQ9Y4W2 734 aaKnown RBP23.37■■□□□ 1.33
KCNK3-201ENST00000302909 HIRIP3Q9BW71 556 aaPredicted RBP23.37■■□□□ 1.33
KCNK3-201ENST00000302909 NAP1L5Q96NT1 182 aaPredicted RBP23.3■■□□□ 1.32
KCNK3-201ENST00000302909 NEFMP07197 916 aa23.29■■□□□ 1.32
KCNK3-201ENST00000302909 HSP90AA1P07900 732 aaKnown RBP23.29■■□□□ 1.32
KCNK3-201ENST00000302909 SENP3-EIF4A1A0A087X0R7 540 aa23.27■■□□□ 1.32
KCNK3-201ENST00000302909 CCDC180Q9P1Z9 1646 aa23.23■■□□□ 1.31
KCNK3-201ENST00000302909 NOP58Q9Y2X3 529 aaKnown RBP23.22■■□□□ 1.31
KCNK3-201ENST00000302909 RBM19Q9Y4C8 960 aaKnown RBP23.18■■□□□ 1.3
KCNK3-201ENST00000302909 AMER1Q5JTC6 1135 aaPredicted RBP23.17■■□□□ 1.3
KCNK3-201ENST00000302909 ARID4BQ4LE39 1312 aaPredicted RBP23.14■■□□□ 1.29
KCNK3-201ENST00000302909 UPF2Q9HAU5 1272 aaKnown RBP23.13■■□□□ 1.29
KCNK3-201ENST00000302909 TSHZ2Q9NRE2 1034 aa23.09■■□□□ 1.29
KCNK3-201ENST00000302909 TRIM44Q96DX7 344 aaPredicted RBP23.08■■□□□ 1.28
KCNK3-201ENST00000302909 MRS2Q9HD23 443 aa23.05■■□□□ 1.28
KCNK3-201ENST00000302909 TONSLQ96HA7 1378 aa23.02■■□□□ 1.28
KCNK3-201ENST00000302909 DDRGK1Q96HY6 314 aa23.01■■□□□ 1.27
KCNK3-201ENST00000302909 P3H3Q8IVL6 736 aa22.99■■□□□ 1.27
KCNK3-201ENST00000302909 ERICH6BQ5W0A0 696 aa22.98■■□□□ 1.27
KCNK3-201ENST00000302909 B4GALNT3Q6L9W6 998 aa22.97■■□□□ 1.27
KCNK3-201ENST00000302909 SLC24A1O60721 1099 aa22.96■■□□□ 1.27
KCNK3-201ENST00000302909 TNNT2P45379 298 aaPredicted RBP22.92■■□□□ 1.26
KCNK3-201ENST00000302909 ARID3CA6NKF2 412 aa22.9■■□□□ 1.26
KCNK3-201ENST00000302909 TMC1Q8TDI8 760 aa22.9■■□□□ 1.26
KCNK3-201ENST00000302909 PPM1GO15355 546 aaPredicted RBP22.9■■□□□ 1.26
KCNK3-201ENST00000302909 ARID3AQ99856 593 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms