Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 AC012414.1-201ENST00000556676 535 ntBASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 AC027682.1-201ENST00000562846 899 ntBASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 TPRG1LP1-201ENST00000598702 760 ntBASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 AC120498.10-201ENST00000621827 505 ntBASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TMEM56-RWDD3S4R434 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 AC138907.5-202ENST00000569484 235 ntBASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM56-RWDD3S4R434 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 KRT87P-202ENST00000534226 1464 ntBASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM56-RWDD3S4R434 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TMEM56-RWDD3S4R434 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM56-RWDD3S4R434 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TMEM56-RWDD3S4R434 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM56-RWDD3S4R434 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM56-RWDD3S4R434 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM56-RWDD3S4R434 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.47■□□□□ 0.23
TMEM56-RWDD3S4R434 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
TMEM56-RWDD3S4R434 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.47■□□□□ 0.23
TMEM56-RWDD3S4R434 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.47■□□□□ 0.23
TMEM56-RWDD3S4R434 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms