Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 AP003071.4-201ENST00000562276 1284 ntBASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 AF186192.3-201ENST00000583427 947 ntBASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 MIR2861-201ENST00000636310 90 ntBASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 AL024507.2-201ENST00000606070 2574 ntBASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHAC2Q9Y5I4 FBXW4P1-201ENST00000426721 2239 ntBASIC24.2■■□□□ 1.47
PCDHAC2Q9Y5I4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHAC2Q9Y5I4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHAC2Q9Y5I4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHAC2Q9Y5I4 AC244015.2-201ENST00000616358 1861 ntBASIC24.2■■□□□ 1.46
PCDHAC2Q9Y5I4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHAC2Q9Y5I4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHAC2Q9Y5I4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.2■■□□□ 1.46
PCDHAC2Q9Y5I4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHAC2Q9Y5I4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.2■■□□□ 1.46
PCDHAC2Q9Y5I4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHAC2Q9Y5I4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHAC2Q9Y5I4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHAC2Q9Y5I4 EP400NL-214ENST00000641289 2402 ntBASIC24.2■■□□□ 1.46
PCDHAC2Q9Y5I4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 AL121829.2-201ENST00000620908 328 ntBASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHAC2Q9Y5I4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHAC2Q9Y5I4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
PCDHAC2Q9Y5I4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHAC2Q9Y5I4 FAM197Y1-201ENST00000421178 764 ntBASIC24.18■■□□□ 1.46
PCDHAC2Q9Y5I4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHAC2Q9Y5I4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHAC2Q9Y5I4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
PCDHAC2Q9Y5I4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHAC2Q9Y5I4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHAC2Q9Y5I4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHAC2Q9Y5I4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHAC2Q9Y5I4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHAC2Q9Y5I4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 CD177P1-201ENST00000606252 935 ntBASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 NBPF21P-201ENST00000425093 1451 ntBASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
PCDHAC2Q9Y5I4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 AC023632.3-201ENST00000521633 145 ntBASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 PNN-205ENST00000556530 601 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 KRT8P9-201ENST00000558927 1449 ntBASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms