Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 TRM3YDL112W 4311 nt1.81□□□□□ -2.12
RPA49Q01080 YER088C-AYER088C-A 324 nt1.81□□□□□ -2.12
RPA49Q01080 YBL073WYBL073W 312 nt1.81□□□□□ -2.12
RPA49Q01080 YOR192C-CYOR192C-C 237 nt1.81□□□□□ -2.12
RPA49Q01080 BPH1YCR032W 6504 nt1.81□□□□□ -2.12
RPA49Q01080 YGR250CYGR250C 2346 nt1.8□□□□□ -2.12
RPA49Q01080 SDH7YDR511W 402 nt1.8□□□□□ -2.12
RPA49Q01080 AGA2YGL032C 264 nt1.8□□□□□ -2.12
RPA49Q01080 VPS15YBR097W 4365 nt1.79□□□□□ -2.12
RPA49Q01080 YJR039WYJR039W 3366 nt1.79□□□□□ -2.12
RPA49Q01080 CBS1YDL069C 690 nt1.79□□□□□ -2.12
RPA49Q01080 YKL202WYKL202W 582 nt1.79□□□□□ -2.12
RPA49Q01080 YNL114CYNL114C 372 nt1.79□□□□□ -2.12
RPA49Q01080 DFG16YOR030W 1860 nt1.78□□□□□ -2.12
RPA49Q01080 PRE4YFR050C 801 nt1.78□□□□□ -2.12
RPA49Q01080 RPS27AYKL156W 249 nt1.78□□□□□ -2.12
RPA49Q01080 YPR177CYPR177C 372 nt1.78□□□□□ -2.12
RPA49Q01080 DCP2YNL118C 2913 nt1.78□□□□□ -2.12
RPA49Q01080 MAK10YEL053C 2202 nt1.78□□□□□ -2.13
RPA49Q01080 NOP53YPL146C 1368 nt1.77□□□□□ -2.13
RPA49Q01080 YMR001C-AYMR001C-A 231 nt1.77□□□□□ -2.13
RPA49Q01080 HMI1YOL095C 2121 nt1.77□□□□□ -2.13
RPA49Q01080 HSL1YKL101W 4557 nt1.77□□□□□ -2.13
RPA49Q01080 IRR1YIL026C 3453 nt1.77□□□□□ -2.13
RPA49Q01080 MEC1YBR136W 7107 nt1.77□□□□□ -2.13
RPA49Q01080 YOR093CYOR093C 4947 nt1.77□□□□□ -2.13
RPA49Q01080 SFB2YNL049C 2631 nt1.76□□□□□ -2.13
RPA49Q01080 YIL066W-AYIL066W-A 444 nt1.76□□□□□ -2.13
RPA49Q01080 SWI5YDR146C 2130 nt1.76□□□□□ -2.13
RPA49Q01080 MSC6YOR354C 2079 nt1.76□□□□□ -2.13
RPA49Q01080 RTT102YGR275W 474 nt1.75□□□□□ -2.13
RPA49Q01080 RRT1YBL048W 312 nt1.75□□□□□ -2.13
RPA49Q01080 COA6YMR244C-A 315 nt1.75□□□□□ -2.13
RPA49Q01080 MRPL50YNR022C 420 nt1.75□□□□□ -2.13
RPA49Q01080 YOR146WYOR146W 306 nt1.75□□□□□ -2.13
RPA49Q01080 DNF3YMR162C 4971 nt1.75□□□□□ -2.13
RPA49Q01080 RLM1YPL089C 2031 nt1.74□□□□□ -2.13
RPA49Q01080 LHS1YKL073W 2646 nt1.74□□□□□ -2.13
RPA49Q01080 NUP192YJL039C 5052 nt1.74□□□□□ -2.13
RPA49Q01080 HDA3YPR179C 1968 nt1.74□□□□□ -2.13
RPA49Q01080 BRR2YER172C 6492 nt1.74□□□□□ -2.13
RPA49Q01080 YDL011CYDL011C 324 nt1.74□□□□□ -2.13
RPA49Q01080 YGR265WYGR265W 411 nt1.74□□□□□ -2.13
RPA49Q01080 RPS24BYIL069C 408 nt1.74□□□□□ -2.13
RPA49Q01080 YHR028W-AYHR028W-A 321 nt1.73□□□□□ -2.13
RPA49Q01080 YPL185WYPL185W 396 nt1.73□□□□□ -2.13
RPA49Q01080 SWI6YLR182W 2412 nt1.73□□□□□ -2.13
RPA49Q01080 HIR3YJR140C 4947 nt1.73□□□□□ -2.13
RPA49Q01080 YNL144CYNL144C 2223 nt1.72□□□□□ -2.13
RPA49Q01080 YDR008CYDR008C 351 nt1.72□□□□□ -2.13
RPA49Q01080 TIM13YGR181W 318 nt1.72□□□□□ -2.13
RPA49Q01080 PAU18YLL064C 363 nt1.72□□□□□ -2.13
RPA49Q01080 YLR146W-AYLR146W-A 189 nt1.72□□□□□ -2.13
RPA49Q01080 YLR154W-FYLR154W-F 141 nt1.72□□□□□ -2.13
RPA49Q01080 UBC7YMR022W 498 nt1.72□□□□□ -2.13
RPA49Q01080 PAU6YNR076W 363 nt1.72□□□□□ -2.13
RPA49Q01080 YOL159CYOL159C 516 nt1.72□□□□□ -2.13
RPA49Q01080 OSH6YKR003W 1347 nt1.71□□□□□ -2.14
RPA49Q01080 SWF1YDR126W 1011 nt1.71□□□□□ -2.14
RPA49Q01080 ABM1YJR108W 372 nt1.71□□□□□ -2.14
RPA49Q01080 MCM22YJR135C 720 nt1.71□□□□□ -2.14
RPA49Q01080 YAR047CYAR047C 321 nt1.71□□□□□ -2.14
RPA49Q01080 RPL9BYNL067W 576 nt1.71□□□□□ -2.14
RPA49Q01080 RPL32YBL092W 393 nt1.71□□□□□ -2.14
RPA49Q01080 YCL046WYCL046W 324 nt1.71□□□□□ -2.14
RPA49Q01080 ZRG17YNR039C 1818 nt1.7□□□□□ -2.14
RPA49Q01080 ZIP1YDR285W 2628 nt1.7□□□□□ -2.14
RPA49Q01080 YFL019CYFL019C 354 nt1.7□□□□□ -2.14
RPA49Q01080 YBR285WYBR285W 435 nt1.7□□□□□ -2.14
RPA49Q01080 CAT8YMR280C 4302 nt1.7□□□□□ -2.14
RPA49Q01080 PKH3YDR466W 2697 nt1.7□□□□□ -2.14
RPA49Q01080 TDA9YML081W 3756 nt1.7□□□□□ -2.14
RPA49Q01080 LRE1YCL051W 1752 nt1.7□□□□□ -2.14
RPA49Q01080 YER079WYER079W 633 nt1.69□□□□□ -2.14
RPA49Q01080 YHR210CYHR210C 1026 nt1.69□□□□□ -2.14
RPA49Q01080 YOR053WYOR053W 342 nt1.69□□□□□ -2.14
RPA49Q01080 HHT1YBR010W 411 nt1.69□□□□□ -2.14
RPA49Q01080 MDM20YOL076W 2391 nt1.69□□□□□ -2.14
RPA49Q01080 YDR269CYDR269C 324 nt1.68□□□□□ -2.14
RPA49Q01080 tT(UGU)HtT(UGU)H 72 nt1.68□□□□□ -2.14
RPA49Q01080 PHS1YJL097W 654 nt1.68□□□□□ -2.14
RPA49Q01080 AIM9YER080W 1884 nt1.68□□□□□ -2.14
RPA49Q01080 UTP21YLR409C 2820 nt1.67□□□□□ -2.14
RPA49Q01080 YDR157WYDR157W 402 nt1.67□□□□□ -2.14
RPA49Q01080 YJL020W-AYJL020W-A 258 nt1.67□□□□□ -2.14
RPA49Q01080 TRX1YLR043C 312 nt1.67□□□□□ -2.14
RPA49Q01080 LEE1YPL054W 906 nt1.67□□□□□ -2.14
RPA49Q01080 SPO23YBR250W 1572 nt1.67□□□□□ -2.14
RPA49Q01080 SAC3YDR159W 3906 nt1.67□□□□□ -2.14
RPA49Q01080 EFR3YMR212C 2349 nt1.66□□□□□ -2.14
RPA49Q01080 MSH5YDL154W 2706 nt1.66□□□□□ -2.14
RPA49Q01080 WIP1YDR374W-A 270 nt1.66□□□□□ -2.14
RPA49Q01080 ANS1YHR126C 480 nt1.66□□□□□ -2.14
RPA49Q01080 YPL229WYPL229W 621 nt1.66□□□□□ -2.14
RPA49Q01080 CTF4YPR135W 2784 nt1.65□□□□□ -2.14
RPA49Q01080 PCF11YDR228C 1881 nt1.65□□□□□ -2.14
RPA49Q01080 YHL037CYHL037C 402 nt1.65□□□□□ -2.15
RPA49Q01080 YIL059CYIL059C 366 nt1.65□□□□□ -2.15
RPA49Q01080 YMR247W-AYMR247W-A 144 nt1.65□□□□□ -2.15
RPA49Q01080 SAR1YPL218W 573 nt1.65□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 90.2 ms