Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 YMR045CYMR045C 5268 nt1.82□□□□□ -2.12
CAF40P53829 TOF2YKR010C 2316 nt1.82□□□□□ -2.12
CAF40P53829 YHR214C-BYHR214C-B 5382 nt1.81□□□□□ -2.12
CAF40P53829 SAP190YKR028W 3102 nt1.81□□□□□ -2.12
CAF40P53829 YKL118WYKL118W 312 nt1.81□□□□□ -2.12
CAF40P53829 YKL136WYKL136W 399 nt1.81□□□□□ -2.12
CAF40P53829 YPL229WYPL229W 621 nt1.81□□□□□ -2.12
CAF40P53829 MNL2YLR057W 2550 nt1.81□□□□□ -2.12
CAF40P53829 JIP5YPR169W 1479 nt1.81□□□□□ -2.12
CAF40P53829 SIR4YDR227W 4077 nt1.81□□□□□ -2.12
CAF40P53829 YBR184WYBR184W 1572 nt1.81□□□□□ -2.12
CAF40P53829 GUP1YGL084C 1683 nt1.8□□□□□ -2.12
CAF40P53829 SMY1YKL079W 1971 nt1.8□□□□□ -2.12
CAF40P53829 YDR008CYDR008C 351 nt1.8□□□□□ -2.12
CAF40P53829 CSN9YDR179C 489 nt1.8□□□□□ -2.12
CAF40P53829 YGR174W-AYGR174W-A 87 nt1.8□□□□□ -2.12
CAF40P53829 YKR075W-AYKR075W-A 270 nt1.8□□□□□ -2.12
CAF40P53829 YLR053CYLR053C 327 nt1.8□□□□□ -2.12
CAF40P53829 YOR072W-AYOR072W-A 249 nt1.8□□□□□ -2.12
CAF40P53829 KOG1YHR186C 4674 nt1.79□□□□□ -2.12
CAF40P53829 YBP1YBR216C 2025 nt1.79□□□□□ -2.12
CAF40P53829 snR70snR70 164 nt1.79□□□□□ -2.12
CAF40P53829 YHL041WYHL041W 450 nt1.79□□□□□ -2.12
CAF40P53829 RPL42BYHR141C 321 nt1.79□□□□□ -2.12
CAF40P53829 RPL42AYNL162W 321 nt1.79□□□□□ -2.12
CAF40P53829 YSY6YBR162W-A 198 nt1.79□□□□□ -2.12
CAF40P53829 TUS1YLR425W 3924 nt1.79□□□□□ -2.12
CAF40P53829 SGO1YOR073W 1773 nt1.78□□□□□ -2.12
CAF40P53829 YCR043CYCR043C 384 nt1.78□□□□□ -2.12
CAF40P53829 YDL062WYDL062W 426 nt1.78□□□□□ -2.12
CAF40P53829 YDR413CYDR413C 576 nt1.78□□□□□ -2.12
CAF40P53829 PRE4YFR050C 801 nt1.78□□□□□ -2.12
CAF40P53829 YNL114CYNL114C 372 nt1.78□□□□□ -2.12
CAF40P53829 SLM1YIL105C 2061 nt1.78□□□□□ -2.13
CAF40P53829 BUD2YKL092C 3315 nt1.78□□□□□ -2.13
CAF40P53829 SCP160YJL080C 3669 nt1.77□□□□□ -2.13
CAF40P53829 YER097WYER097W 330 nt1.77□□□□□ -2.13
CAF40P53829 YHL037CYHL037C 402 nt1.77□□□□□ -2.13
CAF40P53829 VPS34YLR240W 2628 nt1.77□□□□□ -2.13
CAF40P53829 PLC1YPL268W 2610 nt1.76□□□□□ -2.13
CAF40P53829 NOP53YPL146C 1368 nt1.76□□□□□ -2.13
CAF40P53829 MCM22YJR135C 720 nt1.76□□□□□ -2.13
CAF40P53829 RPS27AYKL156W 249 nt1.76□□□□□ -2.13
CAF40P53829 YBL012CYBL012C 402 nt1.76□□□□□ -2.13
CAF40P53829 RKM1YPL208W 1752 nt1.76□□□□□ -2.13
CAF40P53829 CDC60YPL160W 3273 nt1.76□□□□□ -2.13
CAF40P53829 SNF5YBR289W 2718 nt1.76□□□□□ -2.13
CAF40P53829 ATG9YDL149W 2994 nt1.76□□□□□ -2.13
CAF40P53829 ALK2YBL009W 2031 nt1.76□□□□□ -2.13
CAF40P53829 DFG16YOR030W 1860 nt1.75□□□□□ -2.13
CAF40P53829 PEX8YGR077C 1770 nt1.75□□□□□ -2.13
CAF40P53829 UTP22YGR090W 3714 nt1.75□□□□□ -2.13
CAF40P53829 PDR8YLR266C 2106 nt1.75□□□□□ -2.13
CAF40P53829 OSH6YKR003W 1347 nt1.75□□□□□ -2.13
CAF40P53829 YFL032WYFL032W 321 nt1.75□□□□□ -2.13
CAF40P53829 YHR007C-AYHR007C-A 216 nt1.75□□□□□ -2.13
CAF40P53829 YMR141W-AYMR141W-A 225 nt1.75□□□□□ -2.13
CAF40P53829 RPL36BYPL249C-A 303 nt1.75□□□□□ -2.13
CAF40P53829 YDR341CYDR341C 1824 nt1.75□□□□□ -2.13
CAF40P53829 MYO2YOR326W 4725 nt1.74□□□□□ -2.13
CAF40P53829 PXA2YKL188C 2562 nt1.74□□□□□ -2.13
CAF40P53829 GRR1YJR090C 3456 nt1.74□□□□□ -2.13
CAF40P53829 RPL35AYDL191W 363 nt1.74□□□□□ -2.13
CAF40P53829 RPL37BYDR500C 267 nt1.74□□□□□ -2.13
CAF40P53829 YHR210CYHR210C 1026 nt1.74□□□□□ -2.13
CAF40P53829 TMA10YLR327C 261 nt1.74□□□□□ -2.13
CAF40P53829 SAR1YPL218W 573 nt1.74□□□□□ -2.13
CAF40P53829 snR36snR36 182 nt1.74□□□□□ -2.13
CAF40P53829 BPH1YCR032W 6504 nt1.74□□□□□ -2.13
CAF40P53829 CAT2YML042W 2013 nt1.73□□□□□ -2.13
CAF40P53829 PAU18YLL064C 363 nt1.73□□□□□ -2.13
CAF40P53829 YMR247W-AYMR247W-A 144 nt1.73□□□□□ -2.13
CAF40P53829 CYB5YNL111C 363 nt1.73□□□□□ -2.13
CAF40P53829 PAU6YNR076W 363 nt1.73□□□□□ -2.13
CAF40P53829 HHT1YBR010W 411 nt1.73□□□□□ -2.13
CAF40P53829 YOR199WYOR199W 330 nt1.73□□□□□ -2.13
CAF40P53829 YCL046WYCL046W 324 nt1.73□□□□□ -2.13
CAF40P53829 IRR1YIL026C 3453 nt1.73□□□□□ -2.13
CAF40P53829 SYH1YPL105C 2550 nt1.73□□□□□ -2.13
CAF40P53829 VTC3YPL019C 2508 nt1.73□□□□□ -2.13
CAF40P53829 UBR2YLR024C 5619 nt1.72□□□□□ -2.13
CAF40P53829 BUB1YGR188C 3066 nt1.72□□□□□ -2.13
CAF40P53829 tT(UGU)HtT(UGU)H 72 nt1.72□□□□□ -2.13
CAF40P53829 MF(ALPHA)1YPL187W 498 nt1.72□□□□□ -2.13
CAF40P53829 LHS1YKL073W 2646 nt1.72□□□□□ -2.13
CAF40P53829 UBP1YDL122W 2430 nt1.72□□□□□ -2.13
CAF40P53829 PUT3YKL015W 2940 nt1.72□□□□□ -2.13
CAF40P53829 CFT2YLR115W 2580 nt1.71□□□□□ -2.14
CAF40P53829 CYC7YEL039C 342 nt1.71□□□□□ -2.14
CAF40P53829 YKL183C-AYKL183C-A 213 nt1.71□□□□□ -2.14
CAF40P53829 UPS1YLR193C 528 nt1.71□□□□□ -2.14
CAF40P53829 YMR193C-AYMR193C-A 387 nt1.71□□□□□ -2.14
CAF40P53829 NUT2YPR168W 474 nt1.71□□□□□ -2.14
CAF40P53829 ARP7YPR034W 1434 nt1.71□□□□□ -2.14
CAF40P53829 MVP1YMR004W 1536 nt1.71□□□□□ -2.14
CAF40P53829 ZRG8YER033C 3231 nt1.7□□□□□ -2.14
CAF40P53829 IRC20YLR247C 4671 nt1.7□□□□□ -2.14
CAF40P53829 RPH1YER169W 2391 nt1.7□□□□□ -2.14
CAF40P53829 UTP21YLR409C 2820 nt1.7□□□□□ -2.14
CAF40P53829 GCN4YEL009C 846 nt1.7□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms