Protein–RNA interactions for Protein: P40541

IRR1, Cohesin subunit SCC3, yeastyeast

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IRR1P40541 SDH2YLL041C 801 nt2.72□□□□□ -1.97
IRR1P40541 YLR255CYLR255C 354 nt2.72□□□□□ -1.97
IRR1P40541 YNL114CYNL114C 372 nt2.72□□□□□ -1.97
IRR1P40541 SET2YJL168C 2202 nt2.72□□□□□ -1.97
IRR1P40541 PXA2YKL188C 2562 nt2.71□□□□□ -1.98
IRR1P40541 CDC36YDL165W 576 nt2.71□□□□□ -1.98
IRR1P40541 YDR286CYDR286C 345 nt2.71□□□□□ -1.98
IRR1P40541 RPL42BYHR141C 321 nt2.71□□□□□ -1.98
IRR1P40541 RPS29AYLR388W 171 nt2.71□□□□□ -1.98
IRR1P40541 RPL42AYNL162W 321 nt2.71□□□□□ -1.98
IRR1P40541 FAR11YNL127W 2862 nt2.71□□□□□ -1.98
IRR1P40541 KRE33YNL132W 3171 nt2.7□□□□□ -1.98
IRR1P40541 PHO2YDL106C 1680 nt2.7□□□□□ -1.98
IRR1P40541 YIL174WYIL174W 228 nt2.7□□□□□ -1.98
IRR1P40541 YJL222W-AYJL222W-A 228 nt2.7□□□□□ -1.98
IRR1P40541 TRX1YLR043C 312 nt2.7□□□□□ -1.98
IRR1P40541 YMR141W-AYMR141W-A 225 nt2.7□□□□□ -1.98
IRR1P40541 YOR394C-AYOR394C-A 168 nt2.7□□□□□ -1.98
IRR1P40541 YPR002C-AYPR002C-A 198 nt2.7□□□□□ -1.98
IRR1P40541 TRS130YMR218C 3309 nt2.7□□□□□ -1.98
IRR1P40541 YGR250CYGR250C 2346 nt2.7□□□□□ -1.98
IRR1P40541 SLM1YIL105C 2061 nt2.7□□□□□ -1.98
IRR1P40541 HCS1YKL017C 2052 nt2.7□□□□□ -1.98
IRR1P40541 COS111YBR203W 2775 nt2.7□□□□□ -1.98
IRR1P40541 RSE1YML049C 4086 nt2.69□□□□□ -1.98
IRR1P40541 CFT2YLR115W 2580 nt2.69□□□□□ -1.98
IRR1P40541 SRO77YBL106C 3033 nt2.69□□□□□ -1.98
IRR1P40541 IRR1YIL026C 3453 nt2.69□□□□□ -1.98
IRR1P40541 snR60snR60 104 nt2.69□□□□□ -1.98
IRR1P40541 YMR046W-AYMR046W-A 129 nt2.69□□□□□ -1.98
IRR1P40541 ABF2YMR072W 552 nt2.69□□□□□ -1.98
IRR1P40541 SWI6YLR182W 2412 nt2.69□□□□□ -1.98
IRR1P40541 ZRG8YER033C 3231 nt2.68□□□□□ -1.98
IRR1P40541 MVP1YMR004W 1536 nt2.68□□□□□ -1.98
IRR1P40541 BNR1YIL159W 4128 nt2.68□□□□□ -1.98
IRR1P40541 YBR064WYBR064W 429 nt2.68□□□□□ -1.98
IRR1P40541 MSB2YGR014W 3921 nt2.68□□□□□ -1.98
IRR1P40541 RPH1YER169W 2391 nt2.67□□□□□ -1.98
IRR1P40541 YOL155W-AYOL155W-A 135 nt2.67□□□□□ -1.98
IRR1P40541 SCW11YGL028C 1629 nt2.67□□□□□ -1.98
IRR1P40541 NUP100YKL068W 2880 nt2.67□□□□□ -1.98
IRR1P40541 YCR043CYCR043C 384 nt2.66□□□□□ -1.98
IRR1P40541 YGL041CYGL041C 204 nt2.66□□□□□ -1.98
IRR1P40541 YOR225WYOR225W 330 nt2.66□□□□□ -1.98
IRR1P40541 AXL1YPR122W 3627 nt2.66□□□□□ -1.98
IRR1P40541 MUK1YPL070W 1839 nt2.65□□□□□ -1.98
IRR1P40541 ESL2YKR096W 3588 nt2.65□□□□□ -1.98
IRR1P40541 tW(CCA)G1tW(CCA)G1 72 nt2.65□□□□□ -1.99
IRR1P40541 tW(CCA)G2tW(CCA)G2 72 nt2.65□□□□□ -1.99
IRR1P40541 tW(CCA)JtW(CCA)J 72 nt2.65□□□□□ -1.99
IRR1P40541 tW(CCA)KtW(CCA)K 72 nt2.65□□□□□ -1.99
IRR1P40541 tW(CCA)MtW(CCA)M 72 nt2.65□□□□□ -1.99
IRR1P40541 tW(CCA)PtW(CCA)P 72 nt2.65□□□□□ -1.99
IRR1P40541 snR43snR43 209 nt2.65□□□□□ -1.99
IRR1P40541 TRA1YHR099W 11235 nt2.65□□□□□ -1.99
IRR1P40541 YPL150WYPL150W 2706 nt2.65□□□□□ -1.99
IRR1P40541 SSQ1YLR369W 1974 nt2.65□□□□□ -1.99
IRR1P40541 VTC3YPL019C 2508 nt2.65□□□□□ -1.99
IRR1P40541 BUB1YGR188C 3066 nt2.65□□□□□ -1.99
IRR1P40541 EDS1YBR033W 2760 nt2.64□□□□□ -1.99
IRR1P40541 MET18YIL128W 3099 nt2.64□□□□□ -1.99
IRR1P40541 YDR406W-AYDR406W-A 246 nt2.64□□□□□ -1.99
IRR1P40541 PAU8YAL068C 363 nt2.64□□□□□ -1.99
IRR1P40541 PAU20YOL161C 363 nt2.64□□□□□ -1.99
IRR1P40541 INP2YMR163C 2118 nt2.63□□□□□ -1.99
IRR1P40541 YEF3YLR249W 3135 nt2.63□□□□□ -1.99
IRR1P40541 Q0032Q0032 291 nt2.63□□□□□ -1.99
IRR1P40541 snR70snR70 164 nt2.63□□□□□ -1.99
IRR1P40541 CYB5YNL111C 363 nt2.63□□□□□ -1.99
IRR1P40541 SWI5YDR146C 2130 nt2.63□□□□□ -1.99
IRR1P40541 PTP3YER075C 2787 nt2.62□□□□□ -1.99
IRR1P40541 MNE1YOR350C 1992 nt2.62□□□□□ -1.99
IRR1P40541 YMR194C-AYMR194C-A 225 nt2.62□□□□□ -1.99
IRR1P40541 UBR1YGR184C 5853 nt2.62□□□□□ -1.99
IRR1P40541 PLC1YPL268W 2610 nt2.61□□□□□ -1.99
IRR1P40541 LCD1YDR499W 2244 nt2.61□□□□□ -1.99
IRR1P40541 SMC6YLR383W 3345 nt2.61□□□□□ -1.99
IRR1P40541 BCK1YJL095W 4437 nt2.61□□□□□ -1.99
IRR1P40541 YBL005W-BYBL005W-B 5268 nt2.61□□□□□ -1.99
IRR1P40541 MDM20YOL076W 2391 nt2.61□□□□□ -1.99
IRR1P40541 RFX1YLR176C 2436 nt2.61□□□□□ -1.99
IRR1P40541 YPL216WYPL216W 3309 nt2.61□□□□□ -1.99
IRR1P40541 FKS3YMR306W 5358 nt2.61□□□□□ -1.99
IRR1P40541 YLR154W-AYLR154W-A 186 nt2.6□□□□□ -1.99
IRR1P40541 YMR172C-AYMR172C-A 384 nt2.6□□□□□ -1.99
IRR1P40541 SLY1YDR189W 2001 nt2.59□□□□□ -1.99
IRR1P40541 snR55snR55 98 nt2.59□□□□□ -1.99
IRR1P40541 MRP10YDL045W-A 288 nt2.59□□□□□ -1.99
IRR1P40541 PAU18YLL064C 363 nt2.59□□□□□ -1.99
IRR1P40541 YNL028WYNL028W 318 nt2.59□□□□□ -1.99
IRR1P40541 PAU6YNR076W 363 nt2.59□□□□□ -1.99
IRR1P40541 YHR073W-AYHR073W-A 177 nt2.58□□□□□ -2
IRR1P40541 YJL135WYJL135W 318 nt2.58□□□□□ -2
IRR1P40541 RPS17AYML024W 411 nt2.58□□□□□ -2
IRR1P40541 CSE2YNR010W 450 nt2.58□□□□□ -2
IRR1P40541 RPB10YOR210W 213 nt2.58□□□□□ -2
IRR1P40541 TUS1YLR425W 3924 nt2.58□□□□□ -2
IRR1P40541 LYS14YDR034C 2373 nt2.58□□□□□ -2
IRR1P40541 VPS8YAL002W 3825 nt2.58□□□□□ -2
IRR1P40541 MLH1YMR167W 2310 nt2.57□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms