Protein–RNA interactions for Protein: P38805

RPF1, Ribosome production factor 1, yeastyeast

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPF1P38805 HDA3YPR179C 1968 nt1.02□□□□□ -2.25
RPF1P38805 GNT1YOR320C 1476 nt1.01□□□□□ -2.25
RPF1P38805 SHE9YDR393W 1371 nt1.01□□□□□ -2.25
RPF1P38805 OCA6YDR067C 675 nt1.01□□□□□ -2.25
RPF1P38805 YGL217CYGL217C 342 nt1.01□□□□□ -2.25
RPF1P38805 YKL068W-AYKL068W-A 237 nt1.01□□□□□ -2.25
RPF1P38805 YKL123WYKL123W 381 nt1.01□□□□□ -2.25
RPF1P38805 RPL40BYKR094C 387 nt1.01□□□□□ -2.25
RPF1P38805 UBX4YMR067C 1251 nt1.01□□□□□ -2.25
RPF1P38805 YOL159C-AYOL159C-A 273 nt1.01□□□□□ -2.25
RPF1P38805 TIM18YOR297C 579 nt1.01□□□□□ -2.25
RPF1P38805 YPR099CYPR099C 357 nt1.01□□□□□ -2.25
RPF1P38805 CAT8YMR280C 4302 nt1.01□□□□□ -2.25
RPF1P38805 SWI5YDR146C 2130 nt1.01□□□□□ -2.25
RPF1P38805 IRR1YIL026C 3453 nt1□□□□□ -2.25
RPF1P38805 PAU2YEL049W 363 nt1□□□□□ -2.25
RPF1P38805 YHR028W-AYHR028W-A 321 nt1□□□□□ -2.25
RPF1P38805 RRT15YLR162W-A 189 nt1□□□□□ -2.25
RPF1P38805 SVS1YPL163C 783 nt1□□□□□ -2.25
RPF1P38805 NUP188YML103C 4968 nt1□□□□□ -2.25
RPF1P38805 PAN3YKL025C 2040 nt0.99□□□□□ -2.25
RPF1P38805 VAM6YDL077C 3150 nt0.99□□□□□ -2.25
RPF1P38805 SLX4YLR135W 2247 nt0.99□□□□□ -2.25
RPF1P38805 SRP14YDL092W 441 nt0.99□□□□□ -2.25
RPF1P38805 YDL211CYDL211C 1119 nt0.99□□□□□ -2.25
RPF1P38805 YDR029WYDR029W 315 nt0.99□□□□□ -2.25
RPF1P38805 CTK3YML112W 891 nt0.99□□□□□ -2.25
RPF1P38805 YPR039WYPR039W 336 nt0.99□□□□□ -2.25
RPF1P38805 SNU56YDR240C 1479 nt0.99□□□□□ -2.25
RPF1P38805 TRM732YMR259C 4263 nt0.98□□□□□ -2.25
RPF1P38805 PFD1YJL179W 330 nt0.98□□□□□ -2.25
RPF1P38805 YOR248WYOR248W 303 nt0.98□□□□□ -2.25
RPF1P38805 YBR032WYBR032W 303 nt0.98□□□□□ -2.25
RPF1P38805 ZIP1YDR285W 2628 nt0.98□□□□□ -2.25
RPF1P38805 GDS1YOR355W 1569 nt0.97□□□□□ -2.25
RPF1P38805 YDR003W-AYDR003W-A 123 nt0.97□□□□□ -2.25
RPF1P38805 YDR509WYDR509W 348 nt0.97□□□□□ -2.25
RPF1P38805 RPL34BYIL052C 366 nt0.97□□□□□ -2.25
RPF1P38805 YLR255CYLR255C 354 nt0.97□□□□□ -2.25
RPF1P38805 YBR071WYBR071W 636 nt0.97□□□□□ -2.25
RPF1P38805 YPR063CYPR063C 423 nt0.97□□□□□ -2.25
RPF1P38805 MSN5YDR335W 3675 nt0.96□□□□□ -2.26
RPF1P38805 SGO1YOR073W 1773 nt0.96□□□□□ -2.26
RPF1P38805 MSH3YCR092C 3057 nt0.96□□□□□ -2.26
RPF1P38805 YHL009W-AYHL009W-A 1242 nt0.96□□□□□ -2.26
RPF1P38805 ILM1YJR118C 612 nt0.96□□□□□ -2.26
RPF1P38805 YLL020CYLL020C 306 nt0.96□□□□□ -2.26
RPF1P38805 RPL9BYNL067W 576 nt0.96□□□□□ -2.26
RPF1P38805 RPL33BYOR234C 324 nt0.96□□□□□ -2.26
RPF1P38805 CDC31YOR257W 486 nt0.96□□□□□ -2.26
RPF1P38805 YOP1YPR028W 543 nt0.96□□□□□ -2.26
RPF1P38805 YLL054CYLL054C 2532 nt0.96□□□□□ -2.26
RPF1P38805 snR84snR84 550 nt0.95□□□□□ -2.26
RPF1P38805 MET32YDR253C 576 nt0.95□□□□□ -2.26
RPF1P38805 TOF2YKR010C 2316 nt0.95□□□□□ -2.26
RPF1P38805 SPR3YGR059W 1539 nt0.94□□□□□ -2.26
RPF1P38805 NST1YNL091W 3723 nt0.94□□□□□ -2.26
RPF1P38805 EMT1tM(CAU)D 73 nt0.94□□□□□ -2.26
RPF1P38805 EMT5tM(CAU)J1 73 nt0.94□□□□□ -2.26
RPF1P38805 EMT3tM(CAU)J2 73 nt0.94□□□□□ -2.26
RPF1P38805 EMT4tM(CAU)M 73 nt0.94□□□□□ -2.26
RPF1P38805 EMT2tM(CAU)O2 73 nt0.94□□□□□ -2.26
RPF1P38805 snR14snR14 160 nt0.94□□□□□ -2.26
RPF1P38805 MEI5YPL121C 669 nt0.94□□□□□ -2.26
RPF1P38805 VPS54YDR027C 2670 nt0.94□□□□□ -2.26
RPF1P38805 YMR153C-AYMR153C-A 336 nt0.93□□□□□ -2.26
RPF1P38805 KIP1YBL063W 3336 nt0.92□□□□□ -2.26
RPF1P38805 MUK1YPL070W 1839 nt0.92□□□□□ -2.26
RPF1P38805 MKT1YNL085W 2493 nt0.92□□□□□ -2.26
RPF1P38805 YDR008CYDR008C 351 nt0.92□□□□□ -2.26
RPF1P38805 tH(GUG)E1tH(GUG)E1 72 nt0.92□□□□□ -2.26
RPF1P38805 tH(GUG)E2tH(GUG)E2 72 nt0.92□□□□□ -2.26
RPF1P38805 tH(GUG)G1tH(GUG)G1 72 nt0.92□□□□□ -2.26
RPF1P38805 tH(GUG)G2tH(GUG)G2 72 nt0.92□□□□□ -2.26
RPF1P38805 tH(GUG)HtH(GUG)H 72 nt0.92□□□□□ -2.26
RPF1P38805 tH(GUG)KtH(GUG)K 72 nt0.92□□□□□ -2.26
RPF1P38805 tH(GUG)MtH(GUG)M 72 nt0.92□□□□□ -2.26
RPF1P38805 YHR139C-AYHR139C-A 312 nt0.92□□□□□ -2.26
RPF1P38805 TMA22YJR014W 597 nt0.92□□□□□ -2.26
RPF1P38805 SPT7YBR081C 3999 nt0.91□□□□□ -2.26
RPF1P38805 YEL057CYEL057C 702 nt0.91□□□□□ -2.26
RPF1P38805 HUR1YGL168W 333 nt0.91□□□□□ -2.26
RPF1P38805 APQ13YJL075C 417 nt0.91□□□□□ -2.26
RPF1P38805 RCN2YOR220W 798 nt0.91□□□□□ -2.26
RPF1P38805 SPO75YLL005C 2607 nt0.91□□□□□ -2.26
RPF1P38805 YGR025WYGR025W 303 nt0.9□□□□□ -2.27
RPF1P38805 YAP3YHL009C 993 nt0.9□□□□□ -2.27
RPF1P38805 YOR161W-BYOR161W-B 261 nt0.9□□□□□ -2.27
RPF1P38805 NOC3YLR002C 1992 nt0.9□□□□□ -2.27
RPF1P38805 SPT21YMR179W 2277 nt0.9□□□□□ -2.27
RPF1P38805 PIG1YLR273C 1947 nt0.89□□□□□ -2.27
RPF1P38805 LYS14YDR034C 2373 nt0.89□□□□□ -2.27
RPF1P38805 AI5_ALPHAQ0070 1893 nt0.89□□□□□ -2.27
RPF1P38805 YER135CYER135C 393 nt0.89□□□□□ -2.27
RPF1P38805 tV(UAC)BtV(UAC)B 74 nt0.89□□□□□ -2.27
RPF1P38805 tV(UAC)DtV(UAC)D 74 nt0.89□□□□□ -2.27
RPF1P38805 SWI4YER111C 3282 nt0.89□□□□□ -2.27
RPF1P38805 PIP2YOR363C 2991 nt0.89□□□□□ -2.27
RPF1P38805 SPO23YBR250W 1572 nt0.88□□□□□ -2.27
RPF1P38805 YER023C-AYER023C-A 213 nt0.88□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms