Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 MAD1YGL086W 2250 nt1.32□□□□□ -2.2
MRPL40P36534 RPL40BYKR094C 387 nt1.32□□□□□ -2.2
MRPL40P36534 FCF2YLR051C 654 nt1.32□□□□□ -2.2
MRPL40P36534 ZRG17YNR039C 1818 nt1.31□□□□□ -2.2
MRPL40P36534 YFL012WYFL012W 447 nt1.31□□□□□ -2.2
MRPL40P36534 PAU18YLL064C 363 nt1.31□□□□□ -2.2
MRPL40P36534 YNL114CYNL114C 372 nt1.31□□□□□ -2.2
MRPL40P36534 PAU6YNR076W 363 nt1.31□□□□□ -2.2
MRPL40P36534 YPR146CYPR146C 330 nt1.31□□□□□ -2.2
MRPL40P36534 YCL046WYCL046W 324 nt1.31□□□□□ -2.2
MRPL40P36534 AHC1YOR023C 1701 nt1.31□□□□□ -2.2
MRPL40P36534 HDA3YPR179C 1968 nt1.3□□□□□ -2.2
MRPL40P36534 SMC4YLR086W 4257 nt1.3□□□□□ -2.2
MRPL40P36534 APL2YKL135C 2181 nt1.3□□□□□ -2.2
MRPL40P36534 tR(UCU)Q1tR(UCU)Q1 73 nt1.3□□□□□ -2.2
MRPL40P36534 YIL020C-AYIL020C-A 339 nt1.3□□□□□ -2.2
MRPL40P36534 DDR48YMR173W 1293 nt1.3□□□□□ -2.2
MRPL40P36534 YOR248WYOR248W 303 nt1.3□□□□□ -2.2
MRPL40P36534 SEC5YDR166C 2916 nt1.3□□□□□ -2.2
MRPL40P36534 MUK1YPL070W 1839 nt1.29□□□□□ -2.2
MRPL40P36534 YDR169C-AYDR169C-A 150 nt1.29□□□□□ -2.2
MRPL40P36534 QCR7YDR529C 384 nt1.29□□□□□ -2.2
MRPL40P36534 tV(UAC)BtV(UAC)B 74 nt1.29□□□□□ -2.2
MRPL40P36534 tV(UAC)DtV(UAC)D 74 nt1.29□□□□□ -2.2
MRPL40P36534 GMC2YLR445W 567 nt1.29□□□□□ -2.2
MRPL40P36534 RAD9YDR217C 3930 nt1.29□□□□□ -2.2
MRPL40P36534 YHR028W-AYHR028W-A 321 nt1.28□□□□□ -2.2
MRPL40P36534 BER1YLR412W 825 nt1.28□□□□□ -2.2
MRPL40P36534 YOL159CYOL159C 516 nt1.28□□□□□ -2.2
MRPL40P36534 YOR161W-BYOR161W-B 261 nt1.28□□□□□ -2.2
MRPL40P36534 TIM18YOR297C 579 nt1.28□□□□□ -2.2
MRPL40P36534 PPN1YDR452W 2025 nt1.28□□□□□ -2.2
MRPL40P36534 YKL044WYKL044W 321 nt1.27□□□□□ -2.21
MRPL40P36534 CTK3YML112W 891 nt1.27□□□□□ -2.21
MRPL40P36534 NOP15YNL110C 663 nt1.27□□□□□ -2.21
MRPL40P36534 YPR099CYPR099C 357 nt1.27□□□□□ -2.21
MRPL40P36534 YSY6YBR162W-A 198 nt1.27□□□□□ -2.21
MRPL40P36534 NST1YNL091W 3723 nt1.26□□□□□ -2.21
MRPL40P36534 YOR192C-AYOR192C-A 1317 nt1.26□□□□□ -2.21
MRPL40P36534 YDL211CYDL211C 1119 nt1.26□□□□□ -2.21
MRPL40P36534 YPR063CYPR063C 423 nt1.26□□□□□ -2.21
MRPL40P36534 RAD50YNL250W 3939 nt1.26□□□□□ -2.21
MRPL40P36534 OCA6YDR067C 675 nt1.25□□□□□ -2.21
MRPL40P36534 YHL009W-AYHL009W-A 1242 nt1.25□□□□□ -2.21
MRPL40P36534 SGO1YOR073W 1773 nt1.25□□□□□ -2.21
MRPL40P36534 SWI5YDR146C 2130 nt1.25□□□□□ -2.21
MRPL40P36534 YLL054CYLL054C 2532 nt1.25□□□□□ -2.21
MRPL40P36534 SPR3YGR059W 1539 nt1.25□□□□□ -2.21
MRPL40P36534 SEC3YER008C 4011 nt1.24□□□□□ -2.21
MRPL40P36534 PAN3YKL025C 2040 nt1.24□□□□□ -2.21
MRPL40P36534 YGL217CYGL217C 342 nt1.24□□□□□ -2.21
MRPL40P36534 YBL029C-AYBL029C-A 285 nt1.24□□□□□ -2.21
MRPL40P36534 YBR071WYBR071W 636 nt1.24□□□□□ -2.21
MRPL40P36534 ZIP1YDR285W 2628 nt1.23□□□□□ -2.21
MRPL40P36534 SHE9YDR393W 1371 nt1.23□□□□□ -2.21
MRPL40P36534 SLX4YLR135W 2247 nt1.23□□□□□ -2.21
MRPL40P36534 PRM8YGL053W 714 nt1.23□□□□□ -2.21
MRPL40P36534 GAL7YBR018C 1101 nt1.23□□□□□ -2.21
MRPL40P36534 RPL33BYOR234C 324 nt1.23□□□□□ -2.21
MRPL40P36534 SVS1YPL163C 783 nt1.23□□□□□ -2.21
MRPL40P36534 IRC16YPR038W 360 nt1.23□□□□□ -2.21
MRPL40P36534 YBR121C-AYBR121C-A 159 nt1.23□□□□□ -2.21
MRPL40P36534 VPS54YDR027C 2670 nt1.23□□□□□ -2.21
MRPL40P36534 ROM2YLR371W 4071 nt1.23□□□□□ -2.21
MRPL40P36534 SIP4YJL089W 2490 nt1.23□□□□□ -2.21
MRPL40P36534 MDS3YGL197W 4464 nt1.22□□□□□ -2.21
MRPL40P36534 PAU2YEL049W 363 nt1.22□□□□□ -2.21
MRPL40P36534 RPL9BYNL067W 576 nt1.22□□□□□ -2.21
MRPL40P36534 TOF2YKR010C 2316 nt1.22□□□□□ -2.21
MRPL40P36534 NUP188YML103C 4968 nt1.21□□□□□ -2.22
MRPL40P36534 YDR509WYDR509W 348 nt1.21□□□□□ -2.22
MRPL40P36534 YJR141WYJR141W 1044 nt1.21□□□□□ -2.22
MRPL40P36534 YBR032WYBR032W 303 nt1.21□□□□□ -2.22
MRPL40P36534 YOP1YPR028W 543 nt1.21□□□□□ -2.22
MRPL40P36534 YPR039WYPR039W 336 nt1.21□□□□□ -2.22
MRPL40P36534 YNL284C-BYNL284C-B 5268 nt1.21□□□□□ -2.22
MRPL40P36534 GDS1YOR355W 1569 nt1.21□□□□□ -2.22
MRPL40P36534 YDR003W-AYDR003W-A 123 nt1.2□□□□□ -2.22
MRPL40P36534 YGR283CYGR283C 1026 nt1.2□□□□□ -2.22
MRPL40P36534 APL1YJR005W 2103 nt1.2□□□□□ -2.22
MRPL40P36534 YLL020CYLL020C 306 nt1.2□□□□□ -2.22
MRPL40P36534 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
MRPL40P36534 SWI4YER111C 3282 nt1.2□□□□□ -2.22
MRPL40P36534 YDR008CYDR008C 351 nt1.19□□□□□ -2.22
MRPL40P36534 MET32YDR253C 576 nt1.19□□□□□ -2.22
MRPL40P36534 RTR1YER139C 681 nt1.19□□□□□ -2.22
MRPL40P36534 NUT1YGL151W 3399 nt1.19□□□□□ -2.22
MRPL40P36534 YKL068W-AYKL068W-A 237 nt1.19□□□□□ -2.22
MRPL40P36534 YOR029WYOR029W 336 nt1.19□□□□□ -2.22
MRPL40P36534 SPT7YBR081C 3999 nt1.18□□□□□ -2.22
MRPL40P36534 YDL016CYDL016C 303 nt1.18□□□□□ -2.22
MRPL40P36534 PAC1YOR269W 1485 nt1.18□□□□□ -2.22
MRPL40P36534 YKL123WYKL123W 381 nt1.17□□□□□ -2.22
MRPL40P36534 NOC3YLR002C 1992 nt1.16□□□□□ -2.22
MRPL40P36534 TMA22YJR014W 597 nt1.16□□□□□ -2.22
MRPL40P36534 RPL34BYIL052C 366 nt1.15□□□□□ -2.23
MRPL40P36534 ILM1YJR118C 612 nt1.15□□□□□ -2.23
MRPL40P36534 UBX4YMR067C 1251 nt1.15□□□□□ -2.23
MRPL40P36534 MKT1YNL085W 2493 nt1.15□□□□□ -2.23
MRPL40P36534 PIG1YLR273C 1947 nt1.15□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 46.5 ms