Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 BX276092.2-201ENST00000417668 665 ntBASIC17.69■□□□□ 0.42
CDH20Q9HBT6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 AL356652.1-201ENST00000615962 565 ntBASIC17.69■□□□□ 0.42
CDH20Q9HBT6 AL589743.5-201ENST00000616611 1050 ntBASIC17.69■□□□□ 0.42
CDH20Q9HBT6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.68■□□□□ 0.42
CDH20Q9HBT6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 TSPY6P-201ENST00000448518 926 ntBASIC17.68■□□□□ 0.42
CDH20Q9HBT6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH20Q9HBT6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 ID1-201ENST00000376105 1233 ntBASIC17.67■□□□□ 0.42
CDH20Q9HBT6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 HLA-L-209ENST00000420110 1011 ntBASIC17.67■□□□□ 0.42
CDH20Q9HBT6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 AC007225.1-201ENST00000566331 1836 ntBASIC17.67■□□□□ 0.42
CDH20Q9HBT6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH20Q9HBT6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 AC104771.1-201ENST00000603335 964 ntBASIC17.66■□□□□ 0.42
CDH20Q9HBT6 AC105020.6-201ENST00000621523 1217 ntBASIC17.66■□□□□ 0.42
CDH20Q9HBT6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CDH20Q9HBT6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 MIPEPP3-201ENST00000412105 444 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms