Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
AFAP1Q8N556 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
AFAP1Q8N556 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC30.61■■■□□ 2.49
AFAP1Q8N556 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
AFAP1Q8N556 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC30.61■■■□□ 2.49
AFAP1Q8N556 AC104076.2-201ENST00000448912 469 ntBASIC30.61■■■□□ 2.49
AFAP1Q8N556 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC30.61■■■□□ 2.49
AFAP1Q8N556 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC30.61■■■□□ 2.49
AFAP1Q8N556 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
AFAP1Q8N556 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC30.61■■■□□ 2.49
AFAP1Q8N556 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
AFAP1Q8N556 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
AFAP1Q8N556 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
AFAP1Q8N556 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
AFAP1Q8N556 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC30.6■■■□□ 2.49
AFAP1Q8N556 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
AFAP1Q8N556 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
AFAP1Q8N556 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC30.6■■■□□ 2.49
AFAP1Q8N556 PNN-205ENST00000556530 601 ntTSL 2 BASIC30.6■■■□□ 2.49
AFAP1Q8N556 FITM1-202ENST00000559294 800 ntBASIC30.6■■■□□ 2.49
AFAP1Q8N556 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
AFAP1Q8N556 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC30.6■■■□□ 2.49
AFAP1Q8N556 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
AFAP1Q8N556 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC30.59■■■□□ 2.49
AFAP1Q8N556 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
AFAP1Q8N556 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
AFAP1Q8N556 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
AFAP1Q8N556 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
AFAP1Q8N556 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
AFAP1Q8N556 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC30.59■■■□□ 2.49
AFAP1Q8N556 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC30.59■■■□□ 2.49
AFAP1Q8N556 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC30.59■■■□□ 2.49
AFAP1Q8N556 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC30.59■■■□□ 2.49
AFAP1Q8N556 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
AFAP1Q8N556 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
AFAP1Q8N556 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC30.59■■■□□ 2.49
AFAP1Q8N556 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
AFAP1Q8N556 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
AFAP1Q8N556 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
AFAP1Q8N556 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
AFAP1Q8N556 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
AFAP1Q8N556 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
AFAP1Q8N556 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC30.58■■■□□ 2.49
AFAP1Q8N556 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
AFAP1Q8N556 AC116562.2-201ENST00000507042 360 ntBASIC30.58■■■□□ 2.49
AFAP1Q8N556 NTF6B-201ENST00000591913 560 ntBASIC30.58■■■□□ 2.49
AFAP1Q8N556 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
AFAP1Q8N556 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
AFAP1Q8N556 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
AFAP1Q8N556 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
AFAP1Q8N556 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC30.57■■■□□ 2.48
AFAP1Q8N556 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
AFAP1Q8N556 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
AFAP1Q8N556 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
AFAP1Q8N556 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
AFAP1Q8N556 TREX2-204ENST00000370212 861 ntTSL 5 BASIC30.57■■■□□ 2.48
AFAP1Q8N556 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
AFAP1Q8N556 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
AFAP1Q8N556 DUX4L26-201ENST00000489078 1255 ntBASIC30.57■■■□□ 2.48
AFAP1Q8N556 NAPSB-206ENST00000562112 1266 ntBASIC30.57■■■□□ 2.48
AFAP1Q8N556 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC30.57■■■□□ 2.48
AFAP1Q8N556 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
AFAP1Q8N556 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
AFAP1Q8N556 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
AFAP1Q8N556 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
AFAP1Q8N556 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
AFAP1Q8N556 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
AFAP1Q8N556 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC30.56■■■□□ 2.48
AFAP1Q8N556 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
AFAP1Q8N556 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
AFAP1Q8N556 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
AFAP1Q8N556 AL137013.1-201ENST00000432946 1228 ntBASIC30.56■■■□□ 2.48
AFAP1Q8N556 SLC25A3P1-201ENST00000443844 931 ntBASIC30.56■■■□□ 2.48
AFAP1Q8N556 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC30.56■■■□□ 2.48
AFAP1Q8N556 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
AFAP1Q8N556 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC30.56■■■□□ 2.48
AFAP1Q8N556 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC30.56■■■□□ 2.48
AFAP1Q8N556 PALM-207ENST00000590161 2137 ntTSL 4 BASIC30.55■■■□□ 2.48
AFAP1Q8N556 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC30.55■■■□□ 2.48
AFAP1Q8N556 KRT18P22-201ENST00000402024 1347 ntBASIC30.55■■■□□ 2.48
AFAP1Q8N556 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
AFAP1Q8N556 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC30.55■■■□□ 2.48
AFAP1Q8N556 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC30.55■■■□□ 2.48
AFAP1Q8N556 AP002982.1-201ENST00000492365 877 ntBASIC30.55■■■□□ 2.48
AFAP1Q8N556 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC30.55■■■□□ 2.48
AFAP1Q8N556 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
AFAP1Q8N556 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC30.55■■■□□ 2.48
AFAP1Q8N556 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
AFAP1Q8N556 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
AFAP1Q8N556 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC30.54■■■□□ 2.48
AFAP1Q8N556 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
AFAP1Q8N556 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC30.54■■■□□ 2.48
AFAP1Q8N556 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC30.54■■■□□ 2.48
AFAP1Q8N556 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
AFAP1Q8N556 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
AFAP1Q8N556 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC30.53■■■□□ 2.48
AFAP1Q8N556 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC30.53■■■□□ 2.48
AFAP1Q8N556 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
AFAP1Q8N556 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC30.53■■■□□ 2.48
AFAP1Q8N556 TMA16-209ENST00000513272 803 ntTSL 2 BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms