Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 NAM7YMR080C 2916 nt1.82□□□□□ -2.12
RUP1Q12242 BTT1YDR252W 450 nt1.82□□□□□ -2.12
RUP1Q12242 ATP17YDR377W 306 nt1.82□□□□□ -2.12
RUP1Q12242 QCR7YDR529C 384 nt1.82□□□□□ -2.12
RUP1Q12242 YGL024WYGL024W 336 nt1.82□□□□□ -2.12
RUP1Q12242 snR54snR54 86 nt1.82□□□□□ -2.12
RUP1Q12242 CAT2YML042W 2013 nt1.82□□□□□ -2.12
RUP1Q12242 YCR087C-AYCR087C-A 462 nt1.81□□□□□ -2.12
RUP1Q12242 YER023C-AYER023C-A 213 nt1.81□□□□□ -2.12
RUP1Q12242 NFU1YKL040C 771 nt1.81□□□□□ -2.12
RUP1Q12242 RPS18BYML026C 441 nt1.81□□□□□ -2.12
RUP1Q12242 YOR192C-CYOR192C-C 237 nt1.81□□□□□ -2.12
RUP1Q12242 VPS34YLR240W 2628 nt1.81□□□□□ -2.12
RUP1Q12242 PEP3YLR148W 2757 nt1.81□□□□□ -2.12
RUP1Q12242 MNL2YLR057W 2550 nt1.8□□□□□ -2.12
RUP1Q12242 MGA2YIR033W 3342 nt1.8□□□□□ -2.12
RUP1Q12242 HIR3YJR140C 4947 nt1.8□□□□□ -2.12
RUP1Q12242 IES5YER092W 378 nt1.8□□□□□ -2.12
RUP1Q12242 FCF2YLR051C 654 nt1.8□□□□□ -2.12
RUP1Q12242 YLR101CYLR101C 396 nt1.8□□□□□ -2.12
RUP1Q12242 YMR153C-AYMR153C-A 336 nt1.8□□□□□ -2.12
RUP1Q12242 CYB5YNL111C 363 nt1.8□□□□□ -2.12
RUP1Q12242 YBR032WYBR032W 303 nt1.8□□□□□ -2.12
RUP1Q12242 ARP7YPR034W 1434 nt1.8□□□□□ -2.12
RUP1Q12242 HER1YOR227W 3741 nt1.8□□□□□ -2.12
RUP1Q12242 BUD2YKL092C 3315 nt1.79□□□□□ -2.12
RUP1Q12242 MON2YNL297C 4911 nt1.79□□□□□ -2.12
RUP1Q12242 TMA22YJR014W 597 nt1.79□□□□□ -2.12
RUP1Q12242 TMA7YLR262C-A 195 nt1.79□□□□□ -2.12
RUP1Q12242 RUF22RUF22 515 nt1.79□□□□□ -2.12
RUP1Q12242 YPL205CYPL205C 345 nt1.79□□□□□ -2.12
RUP1Q12242 YPR177CYPR177C 372 nt1.79□□□□□ -2.12
RUP1Q12242 ATG9YDL149W 2994 nt1.79□□□□□ -2.12
RUP1Q12242 ATG11YPR049C 3537 nt1.78□□□□□ -2.12
RUP1Q12242 PET309YLR067C 2898 nt1.78□□□□□ -2.12
RUP1Q12242 YJL007CYJL007C 315 nt1.78□□□□□ -2.12
RUP1Q12242 CFT2YLR115W 2580 nt1.78□□□□□ -2.12
RUP1Q12242 DNF3YMR162C 4971 nt1.77□□□□□ -2.13
RUP1Q12242 YCR043CYCR043C 384 nt1.77□□□□□ -2.13
RUP1Q12242 URM1YIL008W 300 nt1.77□□□□□ -2.13
RUP1Q12242 RPA34YJL148W 702 nt1.77□□□□□ -2.13
RUP1Q12242 SLM1YIL105C 2061 nt1.77□□□□□ -2.13
RUP1Q12242 MMS22YLR320W 4365 nt1.76□□□□□ -2.13
RUP1Q12242 YSW1YBR148W 1830 nt1.76□□□□□ -2.13
RUP1Q12242 UTP21YLR409C 2820 nt1.76□□□□□ -2.13
RUP1Q12242 YMR272W-BYMR272W-B 108 nt1.76□□□□□ -2.13
RUP1Q12242 YOR392WYOR392W 444 nt1.76□□□□□ -2.13
RUP1Q12242 DOT6YER088C 2013 nt1.76□□□□□ -2.13
RUP1Q12242 RPH1YER169W 2391 nt1.75□□□□□ -2.13
RUP1Q12242 YER006C-AYER006C-A 318 nt1.75□□□□□ -2.13
RUP1Q12242 YHR073W-AYHR073W-A 177 nt1.75□□□□□ -2.13
RUP1Q12242 YHR210CYHR210C 1026 nt1.75□□□□□ -2.13
RUP1Q12242 ZEO1YOL109W 342 nt1.75□□□□□ -2.13
RUP1Q12242 YPL238CYPL238C 390 nt1.75□□□□□ -2.13
RUP1Q12242 YPR099CYPR099C 357 nt1.75□□□□□ -2.13
RUP1Q12242 GDS1YOR355W 1569 nt1.75□□□□□ -2.13
RUP1Q12242 MSH6YDR097C 3729 nt1.74□□□□□ -2.13
RUP1Q12242 SAC3YDR159W 3906 nt1.74□□□□□ -2.13
RUP1Q12242 YBR184WYBR184W 1572 nt1.74□□□□□ -2.13
RUP1Q12242 RPL42BYHR141C 321 nt1.74□□□□□ -2.13
RUP1Q12242 PGA1YNL158W 597 nt1.74□□□□□ -2.13
RUP1Q12242 RPL42AYNL162W 321 nt1.74□□□□□ -2.13
RUP1Q12242 PEX8YGR077C 1770 nt1.74□□□□□ -2.13
RUP1Q12242 SMY1YKL079W 1971 nt1.74□□□□□ -2.13
RUP1Q12242 SEF1YBL066C 3447 nt1.73□□□□□ -2.13
RUP1Q12242 HCS1YKL017C 2052 nt1.73□□□□□ -2.13
RUP1Q12242 YNL144CYNL144C 2223 nt1.73□□□□□ -2.13
RUP1Q12242 DAS1YJL149W 1992 nt1.73□□□□□ -2.13
RUP1Q12242 MCM22YJR135C 720 nt1.73□□□□□ -2.13
RUP1Q12242 LHS1YKL073W 2646 nt1.73□□□□□ -2.13
RUP1Q12242 DFG16YOR030W 1860 nt1.73□□□□□ -2.13
RUP1Q12242 YDL152WYDL152W 366 nt1.72□□□□□ -2.13
RUP1Q12242 tT(UGU)HtT(UGU)H 72 nt1.72□□□□□ -2.13
RUP1Q12242 CGI121YML036W 546 nt1.72□□□□□ -2.13
RUP1Q12242 SNF5YBR289W 2718 nt1.72□□□□□ -2.13
RUP1Q12242 GRR1YJR090C 3456 nt1.72□□□□□ -2.13
RUP1Q12242 PAN3YKL025C 2040 nt1.71□□□□□ -2.14
RUP1Q12242 YLR222C-AYLR222C-A 231 nt1.71□□□□□ -2.14
RUP1Q12242 MKT1YNL085W 2493 nt1.71□□□□□ -2.14
RUP1Q12242 YJR039WYJR039W 3366 nt1.7□□□□□ -2.14
RUP1Q12242 ZRG8YER033C 3231 nt1.7□□□□□ -2.14
RUP1Q12242 UBC7YMR022W 498 nt1.7□□□□□ -2.14
RUP1Q12242 YMR247W-AYMR247W-A 144 nt1.7□□□□□ -2.14
RUP1Q12242 ERP4YOR016C 624 nt1.7□□□□□ -2.14
RUP1Q12242 YLR035C-AYLR035C-A 3468 nt1.7□□□□□ -2.14
RUP1Q12242 HSH155YMR288W 2916 nt1.69□□□□□ -2.14
RUP1Q12242 CBS1YDL069C 690 nt1.69□□□□□ -2.14
RUP1Q12242 YER087C-AYER087C-A 552 nt1.69□□□□□ -2.14
RUP1Q12242 VAR1Q0140 1197 nt1.69□□□□□ -2.14
RUP1Q12242 YLR406C-AYLR406C-A 150 nt1.69□□□□□ -2.14
RUP1Q12242 PRM3YPL192C 402 nt1.69□□□□□ -2.14
RUP1Q12242 YCL046WYCL046W 324 nt1.69□□□□□ -2.14
RUP1Q12242 MSC6YOR354C 2079 nt1.68□□□□□ -2.14
RUP1Q12242 YCR102W-AYCR102W-A 198 nt1.68□□□□□ -2.14
RUP1Q12242 YER076W-AYER076W-A 348 nt1.68□□□□□ -2.14
RUP1Q12242 YKL183C-AYKL183C-A 213 nt1.68□□□□□ -2.14
RUP1Q12242 YLR287CYLR287C 1068 nt1.68□□□□□ -2.14
RUP1Q12242 YML009C-AYML009C-A 327 nt1.68□□□□□ -2.14
RUP1Q12242 YDR509WYDR509W 348 nt1.67□□□□□ -2.14
RUP1Q12242 YER088C-AYER088C-A 324 nt1.67□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 27.4 ms