Protein–RNA interactions for Protein: Q08962

NIP7, 60S ribosome subunit biogenesis protein NIP7, yeastyeast

Known RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIP7Q08962 PIK1YNL267W 3201 nt1.17□□□□□ -2.22
NIP7Q08962 YEL018C-AYEL018C-A 534 nt1.17□□□□□ -2.22
NIP7Q08962 tH(GUG)E1tH(GUG)E1 72 nt1.17□□□□□ -2.22
NIP7Q08962 tH(GUG)E2tH(GUG)E2 72 nt1.17□□□□□ -2.22
NIP7Q08962 tH(GUG)G1tH(GUG)G1 72 nt1.17□□□□□ -2.22
NIP7Q08962 tH(GUG)G2tH(GUG)G2 72 nt1.17□□□□□ -2.22
NIP7Q08962 tH(GUG)HtH(GUG)H 72 nt1.17□□□□□ -2.22
NIP7Q08962 tH(GUG)KtH(GUG)K 72 nt1.17□□□□□ -2.22
NIP7Q08962 tH(GUG)MtH(GUG)M 72 nt1.17□□□□□ -2.22
NIP7Q08962 VMA21YGR105W 234 nt1.17□□□□□ -2.22
NIP7Q08962 tR(UCU)Q1tR(UCU)Q1 73 nt1.17□□□□□ -2.22
NIP7Q08962 COX7YMR256C 183 nt1.17□□□□□ -2.22
NIP7Q08962 SWT1YOR166C 1377 nt1.17□□□□□ -2.22
NIP7Q08962 PMD1YER132C 5262 nt1.17□□□□□ -2.22
NIP7Q08962 PET127YOR017W 2403 nt1.16□□□□□ -2.22
NIP7Q08962 snR79snR79 84 nt1.16□□□□□ -2.22
NIP7Q08962 YER175W-AYER175W-A 165 nt1.16□□□□□ -2.22
NIP7Q08962 CRG1YHR209W 876 nt1.16□□□□□ -2.22
NIP7Q08962 SPC1YJR010C-A 285 nt1.16□□□□□ -2.22
NIP7Q08962 YBR184WYBR184W 1572 nt1.16□□□□□ -2.22
NIP7Q08962 FYV8YGR196C 2454 nt1.15□□□□□ -2.22
NIP7Q08962 YKL023C-AYKL023C-A 228 nt1.15□□□□□ -2.23
NIP7Q08962 RCN1YKL159C 636 nt1.15□□□□□ -2.23
NIP7Q08962 AFB1YLR040C 675 nt1.15□□□□□ -2.23
NIP7Q08962 EGD1YPL037C 474 nt1.15□□□□□ -2.23
NIP7Q08962 YGR109W-BYGR109W-B 4644 nt1.15□□□□□ -2.23
NIP7Q08962 CDC25YLR310C 4770 nt1.15□□□□□ -2.23
NIP7Q08962 IML1YJR138W 4755 nt1.14□□□□□ -2.23
NIP7Q08962 SPC110YDR356W 2835 nt1.14□□□□□ -2.23
NIP7Q08962 RPC10YHR143W-A 213 nt1.14□□□□□ -2.23
NIP7Q08962 PKR1YMR123W 369 nt1.14□□□□□ -2.23
NIP7Q08962 FMP23YBR047W 528 nt1.14□□□□□ -2.23
NIP7Q08962 NCA2YPR155C 1851 nt1.14□□□□□ -2.23
NIP7Q08962 SPO75YLL005C 2607 nt1.13□□□□□ -2.23
NIP7Q08962 YIL029CYIL029C 429 nt1.13□□□□□ -2.23
NIP7Q08962 YGR130CYGR130C 2451 nt1.13□□□□□ -2.23
NIP7Q08962 NUP120YKL057C 3114 nt1.12□□□□□ -2.23
NIP7Q08962 SMB1YER029C 591 nt1.12□□□□□ -2.23
NIP7Q08962 YFL012WYFL012W 447 nt1.12□□□□□ -2.23
NIP7Q08962 YJL022WYJL022W 309 nt1.12□□□□□ -2.23
NIP7Q08962 ABM1YJR108W 372 nt1.12□□□□□ -2.23
NIP7Q08962 SWS2YNL081C 432 nt1.12□□□□□ -2.23
NIP7Q08962 YOR152CYOR152C 771 nt1.12□□□□□ -2.23
NIP7Q08962 OSH6YKR003W 1347 nt1.12□□□□□ -2.23
NIP7Q08962 SEF1YBL066C 3447 nt1.11□□□□□ -2.23
NIP7Q08962 YER121WYER121W 345 nt1.11□□□□□ -2.23
NIP7Q08962 RPL42BYHR141C 321 nt1.11□□□□□ -2.23
NIP7Q08962 YJL015CYJL015C 285 nt1.11□□□□□ -2.23
NIP7Q08962 COF1YLL050C 432 nt1.11□□□□□ -2.23
NIP7Q08962 YLR140WYLR140W 327 nt1.11□□□□□ -2.23
NIP7Q08962 RPL42AYNL162W 321 nt1.11□□□□□ -2.23
NIP7Q08962 ALK1YGL021W 2283 nt1.11□□□□□ -2.23
NIP7Q08962 MSS11YMR164C 2277 nt1.11□□□□□ -2.23
NIP7Q08962 IRR1YIL026C 3453 nt1.11□□□□□ -2.23
NIP7Q08962 MAK10YEL053C 2202 nt1.1□□□□□ -2.23
NIP7Q08962 ADR1YDR216W 3972 nt1.1□□□□□ -2.23
NIP7Q08962 HNT1YDL125C 477 nt1.1□□□□□ -2.23
NIP7Q08962 YBL073WYBL073W 312 nt1.1□□□□□ -2.23
NIP7Q08962 HHT1YBR010W 411 nt1.1□□□□□ -2.23
NIP7Q08962 SEC21YNL287W 2808 nt1.09□□□□□ -2.23
NIP7Q08962 POL5YEL055C 3069 nt1.09□□□□□ -2.23
NIP7Q08962 YJR029WYJR029W 5268 nt1.09□□□□□ -2.23
NIP7Q08962 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.23
NIP7Q08962 YER188C-AYER188C-A 300 nt1.09□□□□□ -2.23
NIP7Q08962 YJR079WYJR079W 330 nt1.09□□□□□ -2.23
NIP7Q08962 YBL029C-AYBL029C-A 285 nt1.09□□□□□ -2.23
NIP7Q08962 SLM6YBR266C 453 nt1.09□□□□□ -2.23
NIP7Q08962 TRM732YMR259C 4263 nt1.09□□□□□ -2.24
NIP7Q08962 YHR214C-CYHR214C-C 1437 nt1.08□□□□□ -2.24
NIP7Q08962 YGR265WYGR265W 411 nt1.08□□□□□ -2.24
NIP7Q08962 CIC1YHR052W 1131 nt1.08□□□□□ -2.24
NIP7Q08962 GMC2YLR445W 567 nt1.08□□□□□ -2.24
NIP7Q08962 YML003WYML003W 873 nt1.08□□□□□ -2.24
NIP7Q08962 RPL33BYOR234C 324 nt1.08□□□□□ -2.24
NIP7Q08962 MLH3YPL164C 2148 nt1.08□□□□□ -2.24
NIP7Q08962 MVP1YMR004W 1536 nt1.08□□□□□ -2.24
NIP7Q08962 EST2YLR318W 2655 nt1.08□□□□□ -2.24
NIP7Q08962 KAP122YGL016W 3246 nt1.08□□□□□ -2.24
NIP7Q08962 PIP2YOR363C 2991 nt1.07□□□□□ -2.24
NIP7Q08962 MTC7YEL033W 420 nt1.07□□□□□ -2.24
NIP7Q08962 tV(UAC)BtV(UAC)B 74 nt1.07□□□□□ -2.24
NIP7Q08962 EMC5YIL027C 426 nt1.07□□□□□ -2.24
NIP7Q08962 tV(UAC)DtV(UAC)D 74 nt1.07□□□□□ -2.24
NIP7Q08962 VPS55YJR044C 423 nt1.07□□□□□ -2.24
NIP7Q08962 YPR146CYPR146C 330 nt1.07□□□□□ -2.24
NIP7Q08962 SMC4YLR086W 4257 nt1.07□□□□□ -2.24
NIP7Q08962 MSH5YDL154W 2706 nt1.07□□□□□ -2.24
NIP7Q08962 YDR169C-AYDR169C-A 150 nt1.06□□□□□ -2.24
NIP7Q08962 YCL046WYCL046W 324 nt1.06□□□□□ -2.24
NIP7Q08962 CDC24YAL041W 2565 nt1.06□□□□□ -2.24
NIP7Q08962 DGR2YKL121W 2559 nt1.06□□□□□ -2.24
NIP7Q08962 SEC5YDR166C 2916 nt1.05□□□□□ -2.24
NIP7Q08962 PBY1YBR094W 2262 nt1.05□□□□□ -2.24
NIP7Q08962 PPN1YDR452W 2025 nt1.05□□□□□ -2.24
NIP7Q08962 FCF2YLR051C 654 nt1.05□□□□□ -2.24
NIP7Q08962 BER1YLR412W 825 nt1.05□□□□□ -2.24
NIP7Q08962 DDR48YMR173W 1293 nt1.05□□□□□ -2.24
NIP7Q08962 YOR376WYOR376W 369 nt1.05□□□□□ -2.24
NIP7Q08962 YBR012W-AYBR012W-A 1323 nt1.05□□□□□ -2.24
NIP7Q08962 YOR142W-AYOR142W-A 1323 nt1.05□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 39.1 ms