Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 TSC3YBR058C-A 243 nt1.63□□□□□ -2.15
RPN8Q08723 SKI3YPR189W 4299 nt1.63□□□□□ -2.15
RPN8Q08723 HER1YOR227W 3741 nt1.63□□□□□ -2.15
RPN8Q08723 YML108WYML108W 318 nt1.62□□□□□ -2.15
RPN8Q08723 CDC33YOL139C 642 nt1.62□□□□□ -2.15
RPN8Q08723 YPR146CYPR146C 330 nt1.62□□□□□ -2.15
RPN8Q08723 RIC1YLR039C 3171 nt1.62□□□□□ -2.15
RPN8Q08723 CFT1YDR301W 4074 nt1.62□□□□□ -2.15
RPN8Q08723 YBR012W-AYBR012W-A 1323 nt1.62□□□□□ -2.15
RPN8Q08723 YOR142W-AYOR142W-A 1323 nt1.62□□□□□ -2.15
RPN8Q08723 YPR158W-AYPR158W-A 1323 nt1.62□□□□□ -2.15
RPN8Q08723 YGR025WYGR025W 303 nt1.61□□□□□ -2.15
RPN8Q08723 YHR130CYHR130C 336 nt1.61□□□□□ -2.15
RPN8Q08723 COA6YMR244C-A 315 nt1.61□□□□□ -2.15
RPN8Q08723 YBL083CYBL083C 426 nt1.61□□□□□ -2.15
RPN8Q08723 GPX2YBR244W 489 nt1.61□□□□□ -2.15
RPN8Q08723 NAM7YMR080C 2916 nt1.61□□□□□ -2.15
RPN8Q08723 MSS11YMR164C 2277 nt1.61□□□□□ -2.15
RPN8Q08723 YLR419WYLR419W 4308 nt1.61□□□□□ -2.15
RPN8Q08723 CAT2YML042W 2013 nt1.61□□□□□ -2.15
RPN8Q08723 SGD1YLR336C 2700 nt1.6□□□□□ -2.15
RPN8Q08723 CDC24YAL041W 2565 nt1.6□□□□□ -2.15
RPN8Q08723 PLC1YPL268W 2610 nt1.6□□□□□ -2.15
RPN8Q08723 YNL284C-BYNL284C-B 5268 nt1.6□□□□□ -2.15
RPN8Q08723 COX1Q0045 1605 nt1.6□□□□□ -2.15
RPN8Q08723 RBK1YCR036W 1002 nt1.6□□□□□ -2.15
RPN8Q08723 BTT1YDR252W 450 nt1.6□□□□□ -2.15
RPN8Q08723 BI2Q0110 1272 nt1.6□□□□□ -2.15
RPN8Q08723 HUR1YGL168W 333 nt1.6□□□□□ -2.15
RPN8Q08723 snR13snR13 124 nt1.6□□□□□ -2.15
RPN8Q08723 YBR174CYBR174C 315 nt1.6□□□□□ -2.15
RPN8Q08723 TUS1YLR425W 3924 nt1.6□□□□□ -2.15
RPN8Q08723 PET309YLR067C 2898 nt1.6□□□□□ -2.15
RPN8Q08723 SEY1YOR165W 2331 nt1.6□□□□□ -2.15
RPN8Q08723 MON2YNL297C 4911 nt1.59□□□□□ -2.15
RPN8Q08723 YCR001WYCR001W 315 nt1.59□□□□□ -2.15
RPN8Q08723 MXR1YER042W 555 nt1.59□□□□□ -2.15
RPN8Q08723 TEN1YLR010C 483 nt1.59□□□□□ -2.15
RPN8Q08723 YOR146WYOR146W 306 nt1.59□□□□□ -2.15
RPN8Q08723 CDC31YOR257W 486 nt1.59□□□□□ -2.15
RPN8Q08723 YBR121C-AYBR121C-A 159 nt1.59□□□□□ -2.15
RPN8Q08723 snR41snR41 95 nt1.59□□□□□ -2.15
RPN8Q08723 YOR192C-AYOR192C-A 1317 nt1.59□□□□□ -2.16
RPN8Q08723 HCS1YKL017C 2052 nt1.59□□□□□ -2.16
RPN8Q08723 MSH6YDR097C 3729 nt1.58□□□□□ -2.16
RPN8Q08723 HMLALPHA2YCL067C 633 nt1.58□□□□□ -2.16
RPN8Q08723 MATALPHA2YCR039C 633 nt1.58□□□□□ -2.16
RPN8Q08723 YCR087C-AYCR087C-A 462 nt1.58□□□□□ -2.16
RPN8Q08723 YER121WYER121W 345 nt1.58□□□□□ -2.16
RPN8Q08723 YER135CYER135C 393 nt1.58□□□□□ -2.16
RPN8Q08723 MNL2YLR057W 2550 nt1.58□□□□□ -2.16
RPN8Q08723 ADR1YDR216W 3972 nt1.58□□□□□ -2.16
RPN8Q08723 YLR149CYLR149C 2193 nt1.58□□□□□ -2.16
RPN8Q08723 HIR3YJR140C 4947 nt1.57□□□□□ -2.16
RPN8Q08723 ASM4YDL088C 1587 nt1.57□□□□□ -2.16
RPN8Q08723 YHR214W-AYHR214W-A 486 nt1.57□□□□□ -2.16
RPN8Q08723 YLR171WYLR171W 390 nt1.57□□□□□ -2.16
RPN8Q08723 YAR068WYAR068W 486 nt1.57□□□□□ -2.16
RPN8Q08723 DOT6YER088C 2013 nt1.57□□□□□ -2.16
RPN8Q08723 MMS22YLR320W 4365 nt1.56□□□□□ -2.16
RPN8Q08723 PEP3YLR148W 2757 nt1.56□□□□□ -2.16
RPN8Q08723 SPC110YDR356W 2835 nt1.56□□□□□ -2.16
RPN8Q08723 YBP1YBR216C 2025 nt1.56□□□□□ -2.16
RPN8Q08723 RVS161YCR009C 798 nt1.56□□□□□ -2.16
RPN8Q08723 VPS20YMR077C 666 nt1.56□□□□□ -2.16
RPN8Q08723 CMC2YBL059C-A 330 nt1.56□□□□□ -2.16
RPN8Q08723 CYB5YNL111C 363 nt1.56□□□□□ -2.16
RPN8Q08723 PET127YOR017W 2403 nt1.55□□□□□ -2.16
RPN8Q08723 tQ(UUG)E2tQ(UUG)E2 72 nt1.55□□□□□ -2.16
RPN8Q08723 NBL1YHR199C-A 222 nt1.55□□□□□ -2.16
RPN8Q08723 TIF11YMR260C 462 nt1.55□□□□□ -2.16
RPN8Q08723 YPR177CYPR177C 372 nt1.55□□□□□ -2.16
RPN8Q08723 PIK1YNL267W 3201 nt1.54□□□□□ -2.16
RPN8Q08723 QCR7YDR529C 384 nt1.54□□□□□ -2.16
RPN8Q08723 YIL102CYIL102C 306 nt1.54□□□□□ -2.16
RPN8Q08723 YBR076C-AYBR076C-A 267 nt1.54□□□□□ -2.16
RPN8Q08723 POL5YEL055C 3069 nt1.53□□□□□ -2.16
RPN8Q08723 IES5YER092W 378 nt1.53□□□□□ -2.16
RPN8Q08723 RPH1YER169W 2391 nt1.53□□□□□ -2.16
RPN8Q08723 FCF2YLR051C 654 nt1.53□□□□□ -2.16
RPN8Q08723 RPS18BYML026C 441 nt1.53□□□□□ -2.16
RPN8Q08723 TDA9YML081W 3756 nt1.53□□□□□ -2.17
RPN8Q08723 SNF5YBR289W 2718 nt1.52□□□□□ -2.17
RPN8Q08723 YCR043CYCR043C 384 nt1.52□□□□□ -2.17
RPN8Q08723 ATP17YDR377W 306 nt1.52□□□□□ -2.17
RPN8Q08723 YER023C-AYER023C-A 213 nt1.52□□□□□ -2.17
RPN8Q08723 ECL1YGR146C 636 nt1.52□□□□□ -2.17
RPN8Q08723 YHR125WYHR125W 306 nt1.52□□□□□ -2.17
RPN8Q08723 RPL42BYHR141C 321 nt1.52□□□□□ -2.17
RPN8Q08723 CRG1YHR209W 876 nt1.52□□□□□ -2.17
RPN8Q08723 NFU1YKL040C 771 nt1.52□□□□□ -2.17
RPN8Q08723 YMR230W-AYMR230W-A 189 nt1.52□□□□□ -2.17
RPN8Q08723 RPL42AYNL162W 321 nt1.52□□□□□ -2.17
RPN8Q08723 YPL238CYPL238C 390 nt1.52□□□□□ -2.17
RPN8Q08723 snR54snR54 86 nt1.52□□□□□ -2.17
RPN8Q08723 SMY1YKL079W 1971 nt1.52□□□□□ -2.17
RPN8Q08723 YOR192C-CYOR192C-C 237 nt1.51□□□□□ -2.17
RPN8Q08723 YBR032WYBR032W 303 nt1.51□□□□□ -2.17
RPN8Q08723 CAT8YMR280C 4302 nt1.51□□□□□ -2.17
RPN8Q08723 MEC1YBR136W 7107 nt1.51□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 81.3 ms