Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 YER076W-AYER076W-A 348 nt1.96□□□□□ -2.1
RPA49Q01080 YHR139C-AYHR139C-A 312 nt1.96□□□□□ -2.1
RPA49Q01080 YMR272W-BYMR272W-B 108 nt1.96□□□□□ -2.1
RPA49Q01080 CYB5YNL111C 363 nt1.96□□□□□ -2.1
RPA49Q01080 PGA1YNL158W 597 nt1.96□□□□□ -2.1
RPA49Q01080 CDC33YOL139C 642 nt1.96□□□□□ -2.1
RPA49Q01080 YBR184WYBR184W 1572 nt1.96□□□□□ -2.1
RPA49Q01080 DOT6YER088C 2013 nt1.96□□□□□ -2.1
RPA49Q01080 YJR098CYJR098C 1971 nt1.96□□□□□ -2.1
RPA49Q01080 ELG1YOR144C 2376 nt1.95□□□□□ -2.1
RPA49Q01080 RBK1YCR036W 1002 nt1.95□□□□□ -2.1
RPA49Q01080 YCR087C-AYCR087C-A 462 nt1.95□□□□□ -2.1
RPA49Q01080 TIF11YMR260C 462 nt1.95□□□□□ -2.1
RPA49Q01080 YBL083CYBL083C 426 nt1.95□□□□□ -2.1
RPA49Q01080 YNL324WYNL324W 396 nt1.95□□□□□ -2.1
RPA49Q01080 VPS34YLR240W 2628 nt1.95□□□□□ -2.1
RPA49Q01080 ZRG8YER033C 3231 nt1.95□□□□□ -2.1
RPA49Q01080 MGA2YIR033W 3342 nt1.94□□□□□ -2.1
RPA49Q01080 YDR509WYDR509W 348 nt1.94□□□□□ -2.1
RPA49Q01080 PDR8YLR266C 2106 nt1.93□□□□□ -2.1
RPA49Q01080 YHR214C-BYHR214C-B 5382 nt1.93□□□□□ -2.1
RPA49Q01080 RRF1YHR038W 693 nt1.93□□□□□ -2.1
RPA49Q01080 ZEO1YOL109W 342 nt1.93□□□□□ -2.1
RPA49Q01080 MYO4YAL029C 4416 nt1.92□□□□□ -2.1
RPA49Q01080 HCS1YKL017C 2052 nt1.92□□□□□ -2.1
RPA49Q01080 TMA22YJR014W 597 nt1.92□□□□□ -2.1
RPA49Q01080 YLR255CYLR255C 354 nt1.92□□□□□ -2.1
RPA49Q01080 YLR264C-AYLR264C-A 117 nt1.92□□□□□ -2.1
RPA49Q01080 GDS1YOR355W 1569 nt1.92□□□□□ -2.1
RPA49Q01080 GUP1YGL084C 1683 nt1.92□□□□□ -2.1
RPA49Q01080 BUD2YKL092C 3315 nt1.91□□□□□ -2.1
RPA49Q01080 ATG9YDL149W 2994 nt1.91□□□□□ -2.1
RPA49Q01080 QCR7YDR529C 384 nt1.91□□□□□ -2.1
RPA49Q01080 URM1YIL008W 300 nt1.91□□□□□ -2.1
RPA49Q01080 YJR157WYJR157W 363 nt1.91□□□□□ -2.1
RPA49Q01080 YOL159C-AYOL159C-A 273 nt1.91□□□□□ -2.1
RPA49Q01080 YBR121C-AYBR121C-A 159 nt1.91□□□□□ -2.1
RPA49Q01080 ARP7YPR034W 1434 nt1.91□□□□□ -2.1
RPA49Q01080 SEF1YBL066C 3447 nt1.9□□□□□ -2.1
RPA49Q01080 YCR043CYCR043C 384 nt1.9□□□□□ -2.11
RPA49Q01080 BTT1YDR252W 450 nt1.9□□□□□ -2.11
RPA49Q01080 CRG1YHR209W 876 nt1.9□□□□□ -2.11
RPA49Q01080 YKL183C-AYKL183C-A 213 nt1.9□□□□□ -2.11
RPA49Q01080 YLR222C-AYLR222C-A 231 nt1.9□□□□□ -2.11
RPA49Q01080 TFC8YPL007C 1767 nt1.9□□□□□ -2.11
RPA49Q01080 PLC1YPL268W 2610 nt1.89□□□□□ -2.11
RPA49Q01080 YOR343W-BYOR343W-B 5313 nt1.89□□□□□ -2.11
RPA49Q01080 YER087C-AYER087C-A 552 nt1.89□□□□□ -2.11
RPA49Q01080 NUP120YKL057C 3114 nt1.88□□□□□ -2.11
RPA49Q01080 VAR1Q0140 1197 nt1.88□□□□□ -2.11
RPA49Q01080 NFU1YKL040C 771 nt1.88□□□□□ -2.11
RPA49Q01080 YLR406C-AYLR406C-A 150 nt1.88□□□□□ -2.11
RPA49Q01080 YML009C-AYML009C-A 327 nt1.88□□□□□ -2.11
RPA49Q01080 ERP4YOR016C 624 nt1.88□□□□□ -2.11
RPA49Q01080 YPR099CYPR099C 357 nt1.88□□□□□ -2.11
RPA49Q01080 DAS1YJL149W 1992 nt1.88□□□□□ -2.11
RPA49Q01080 IRE1YHR079C 3348 nt1.88□□□□□ -2.11
RPA49Q01080 KIP1YBL063W 3336 nt1.88□□□□□ -2.11
RPA49Q01080 GCN2YDR283C 4980 nt1.87□□□□□ -2.11
RPA49Q01080 YER023C-AYER023C-A 213 nt1.87□□□□□ -2.11
RPA49Q01080 YER135CYER135C 393 nt1.87□□□□□ -2.11
RPA49Q01080 YGR042WYGR042W 816 nt1.87□□□□□ -2.11
RPA49Q01080 YHL009W-AYHL009W-A 1242 nt1.87□□□□□ -2.11
RPA49Q01080 YHR073W-AYHR073W-A 177 nt1.87□□□□□ -2.11
RPA49Q01080 RUF22RUF22 515 nt1.87□□□□□ -2.11
RPA49Q01080 FYV12YOR183W 390 nt1.87□□□□□ -2.11
RPA49Q01080 GNT1YOR320C 1476 nt1.87□□□□□ -2.11
RPA49Q01080 DIE2YGR227W 1578 nt1.86□□□□□ -2.11
RPA49Q01080 CFT1YDR301W 4074 nt1.86□□□□□ -2.11
RPA49Q01080 RTP1YMR185W 2946 nt1.86□□□□□ -2.11
RPA49Q01080 TMA7YLR262C-A 195 nt1.86□□□□□ -2.11
RPA49Q01080 CGI121YML036W 546 nt1.86□□□□□ -2.11
RPA49Q01080 PRM3YPL192C 402 nt1.86□□□□□ -2.11
RPA49Q01080 SEC63YOR254C 1992 nt1.86□□□□□ -2.11
RPA49Q01080 UBR2YLR024C 5619 nt1.85□□□□□ -2.11
RPA49Q01080 TOF2YKR010C 2316 nt1.85□□□□□ -2.11
RPA49Q01080 CFT2YLR115W 2580 nt1.85□□□□□ -2.11
RPA49Q01080 PAN3YKL025C 2040 nt1.85□□□□□ -2.11
RPA49Q01080 PAU3YCR104W 375 nt1.85□□□□□ -2.11
RPA49Q01080 YDL152WYDL152W 366 nt1.85□□□□□ -2.11
RPA49Q01080 YHR071C-AYHR071C-A 321 nt1.85□□□□□ -2.11
RPA49Q01080 RPL42BYHR141C 321 nt1.85□□□□□ -2.11
RPA49Q01080 YLR287CYLR287C 1068 nt1.85□□□□□ -2.11
RPA49Q01080 RPL42AYNL162W 321 nt1.85□□□□□ -2.11
RPA49Q01080 FMP23YBR047W 528 nt1.85□□□□□ -2.11
RPA49Q01080 YPL182CYPL182C 384 nt1.85□□□□□ -2.11
RPA49Q01080 YPL238CYPL238C 390 nt1.85□□□□□ -2.11
RPA49Q01080 MKT1YNL085W 2493 nt1.85□□□□□ -2.11
RPA49Q01080 MYO2YOR326W 4725 nt1.85□□□□□ -2.11
RPA49Q01080 SEY1YOR165W 2331 nt1.84□□□□□ -2.11
RPA49Q01080 RPA34YJL148W 702 nt1.84□□□□□ -2.11
RPA49Q01080 YBL071CYBL071C 309 nt1.84□□□□□ -2.11
RPA49Q01080 MSH6YDR097C 3729 nt1.83□□□□□ -2.12
RPA49Q01080 HSH155YMR288W 2916 nt1.83□□□□□ -2.12
RPA49Q01080 YDR114CYDR114C 303 nt1.83□□□□□ -2.12
RPA49Q01080 AGC1YPR021C 2709 nt1.83□□□□□ -2.12
RPA49Q01080 IRC20YLR247C 4671 nt1.83□□□□□ -2.12
RPA49Q01080 YGL239CYGL239C 315 nt1.82□□□□□ -2.12
RPA49Q01080 CTR9YOL145C 3234 nt1.81□□□□□ -2.12
RPA49Q01080 FRK1YPL141C 2598 nt1.81□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 81.2 ms