Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 SPO24YPR036W-A 204 nt1.44□□□□□ -2.18
TDA11P38854 SSK2YNR031C 4740 nt1.44□□□□□ -2.18
TDA11P38854 CHS1YNL192W 3396 nt1.43□□□□□ -2.18
TDA11P38854 YOR019WYOR019W 2193 nt1.43□□□□□ -2.18
TDA11P38854 YER188C-AYER188C-A 300 nt1.43□□□□□ -2.18
TDA11P38854 BER1YLR412W 825 nt1.43□□□□□ -2.18
TDA11P38854 PET123YOR158W 957 nt1.43□□□□□ -2.18
TDA11P38854 IRC16YPR038W 360 nt1.43□□□□□ -2.18
TDA11P38854 HKR1YDR420W 5409 nt1.42□□□□□ -2.18
TDA11P38854 snR79snR79 84 nt1.42□□□□□ -2.18
TDA11P38854 PRM8YGL053W 714 nt1.42□□□□□ -2.18
TDA11P38854 YKL111CYKL111C 336 nt1.42□□□□□ -2.18
TDA11P38854 CGI121YML036W 546 nt1.42□□□□□ -2.18
TDA11P38854 CDC31YOR257W 486 nt1.42□□□□□ -2.18
TDA11P38854 AHC1YOR023C 1701 nt1.42□□□□□ -2.18
TDA11P38854 YCS4YLR272C 3531 nt1.42□□□□□ -2.18
TDA11P38854 YHR214W-AYHR214W-A 486 nt1.41□□□□□ -2.18
TDA11P38854 YAR068WYAR068W 486 nt1.41□□□□□ -2.18
TDA11P38854 NOP53YPL146C 1368 nt1.41□□□□□ -2.18
TDA11P38854 RLM1YPL089C 2031 nt1.4□□□□□ -2.18
TDA11P38854 NUP192YJL039C 5052 nt1.4□□□□□ -2.19
TDA11P38854 YDL152WYDL152W 366 nt1.4□□□□□ -2.19
TDA11P38854 SMB1YER029C 591 nt1.4□□□□□ -2.19
TDA11P38854 UBX4YMR067C 1251 nt1.4□□□□□ -2.19
TDA11P38854 RCN2YOR220W 798 nt1.4□□□□□ -2.19
TDA11P38854 MSH5YDL154W 2706 nt1.4□□□□□ -2.19
TDA11P38854 ALK1YGL021W 2283 nt1.4□□□□□ -2.19
TDA11P38854 SHE9YDR393W 1371 nt1.39□□□□□ -2.19
TDA11P38854 YCR102W-AYCR102W-A 198 nt1.39□□□□□ -2.19
TDA11P38854 YFL012W-AYFL012W-A 375 nt1.39□□□□□ -2.19
TDA11P38854 MCM22YJR135C 720 nt1.39□□□□□ -2.19
TDA11P38854 SLM6YBR266C 453 nt1.39□□□□□ -2.19
TDA11P38854 SFB2YNL049C 2631 nt1.39□□□□□ -2.19
TDA11P38854 YBR012W-AYBR012W-A 1323 nt1.39□□□□□ -2.19
TDA11P38854 YOR142W-AYOR142W-A 1323 nt1.39□□□□□ -2.19
TDA11P38854 YPR158W-AYPR158W-A 1323 nt1.39□□□□□ -2.19
TDA11P38854 SXM1YDR395W 2835 nt1.39□□□□□ -2.19
TDA11P38854 FRK1YPL141C 2598 nt1.38□□□□□ -2.19
TDA11P38854 COX1Q0045 1605 nt1.38□□□□□ -2.19
TDA11P38854 SNF5YBR289W 2718 nt1.38□□□□□ -2.19
TDA11P38854 YDR029WYDR029W 315 nt1.38□□□□□ -2.19
TDA11P38854 QCR7YDR529C 384 nt1.38□□□□□ -2.19
TDA11P38854 YOR248WYOR248W 303 nt1.38□□□□□ -2.19
TDA11P38854 YPR177CYPR177C 372 nt1.38□□□□□ -2.19
TDA11P38854 PBY1YBR094W 2262 nt1.38□□□□□ -2.19
TDA11P38854 CTR9YOL145C 3234 nt1.38□□□□□ -2.19
TDA11P38854 PHR1YOR386W 1698 nt1.37□□□□□ -2.19
TDA11P38854 YIL102CYIL102C 306 nt1.37□□□□□ -2.19
TDA11P38854 YJL022WYJL022W 309 nt1.37□□□□□ -2.19
TDA11P38854 VPS55YJR044C 423 nt1.37□□□□□ -2.19
TDA11P38854 ILM1YJR118C 612 nt1.37□□□□□ -2.19
TDA11P38854 YKL068W-AYKL068W-A 237 nt1.37□□□□□ -2.19
TDA11P38854 YKL183C-AYKL183C-A 213 nt1.37□□□□□ -2.19
TDA11P38854 YLR140WYLR140W 327 nt1.37□□□□□ -2.19
TDA11P38854 YSW1YBR148W 1830 nt1.37□□□□□ -2.19
TDA11P38854 PFD1YJL179W 330 nt1.36□□□□□ -2.19
TDA11P38854 FCF2YLR051C 654 nt1.36□□□□□ -2.19
TDA11P38854 RPS18BYML026C 441 nt1.36□□□□□ -2.19
TDA11P38854 SEF1YBL066C 3447 nt1.36□□□□□ -2.19
TDA11P38854 SNU56YDR240C 1479 nt1.36□□□□□ -2.19
TDA11P38854 DOT6YER088C 2013 nt1.35□□□□□ -2.19
TDA11P38854 HNT1YDL125C 477 nt1.35□□□□□ -2.19
TDA11P38854 CRG1YHR209W 876 nt1.35□□□□□ -2.19
TDA11P38854 PAU18YLL064C 363 nt1.35□□□□□ -2.19
TDA11P38854 PAU6YNR076W 363 nt1.35□□□□□ -2.19
TDA11P38854 SVS1YPL163C 783 nt1.35□□□□□ -2.19
TDA11P38854 SMY1YKL079W 1971 nt1.35□□□□□ -2.19
TDA11P38854 BST1YFL025C 3090 nt1.35□□□□□ -2.19
TDA11P38854 IRE1YHR079C 3348 nt1.35□□□□□ -2.19
TDA11P38854 YHR028W-AYHR028W-A 321 nt1.34□□□□□ -2.19
TDA11P38854 YIL020C-AYIL020C-A 339 nt1.34□□□□□ -2.19
TDA11P38854 PKR1YMR123W 369 nt1.34□□□□□ -2.19
TDA11P38854 YNR025CYNR025C 360 nt1.34□□□□□ -2.19
TDA11P38854 SPR3YGR059W 1539 nt1.34□□□□□ -2.2
TDA11P38854 YBR184WYBR184W 1572 nt1.34□□□□□ -2.2
TDA11P38854 snR84snR84 550 nt1.33□□□□□ -2.2
TDA11P38854 YGR265WYGR265W 411 nt1.33□□□□□ -2.2
TDA11P38854 YCL046WYCL046W 324 nt1.33□□□□□ -2.2
TDA11P38854 BPH1YCR032W 6504 nt1.32□□□□□ -2.2
TDA11P38854 PPN1YDR452W 2025 nt1.32□□□□□ -2.2
TDA11P38854 YDL158CYDL158C 309 nt1.32□□□□□ -2.2
TDA11P38854 TMA22YJR014W 597 nt1.32□□□□□ -2.2
TDA11P38854 STE18YJR086W 333 nt1.32□□□□□ -2.2
TDA11P38854 DDR48YMR173W 1293 nt1.32□□□□□ -2.2
TDA11P38854 YBL073WYBL073W 312 nt1.32□□□□□ -2.2
TDA11P38854 HHT1YBR010W 411 nt1.32□□□□□ -2.2
TDA11P38854 YPR039WYPR039W 336 nt1.32□□□□□ -2.2
TDA11P38854 YPR146CYPR146C 330 nt1.32□□□□□ -2.2
TDA11P38854 YBR121C-AYBR121C-A 159 nt1.32□□□□□ -2.2
TDA11P38854 OSH6YKR003W 1347 nt1.32□□□□□ -2.2
TDA11P38854 MSN5YDR335W 3675 nt1.31□□□□□ -2.2
TDA11P38854 GNT1YOR320C 1476 nt1.31□□□□□ -2.2
TDA11P38854 CDC36YDL165W 576 nt1.31□□□□□ -2.2
TDA11P38854 MET32YDR253C 576 nt1.31□□□□□ -2.2
TDA11P38854 YER135CYER135C 393 nt1.31□□□□□ -2.2
TDA11P38854 COF1YLL050C 432 nt1.31□□□□□ -2.2
TDA11P38854 YNL114CYNL114C 372 nt1.31□□□□□ -2.2
TDA11P38854 YPR099CYPR099C 357 nt1.31□□□□□ -2.2
TDA11P38854 NCA2YPR155C 1851 nt1.31□□□□□ -2.2
TDA11P38854 CDC25YLR310C 4770 nt1.3□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 74.9 ms