Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 TRS65YGR166W 1683 nt3.05□□□□□ -1.92
PEX28P38848 SMD1YGR074W 441 nt3.05□□□□□ -1.92
PEX28P38848 RIF1YBR275C 5751 nt3.05□□□□□ -1.92
PEX28P38848 YEL014CYEL014C 306 nt3.04□□□□□ -1.92
PEX28P38848 YMR321CYMR321C 318 nt3.04□□□□□ -1.92
PEX28P38848 YPR002C-AYPR002C-A 198 nt3.04□□□□□ -1.92
PEX28P38848 NET1YJL076W 3570 nt3.04□□□□□ -1.92
PEX28P38848 EFR3YMR212C 2349 nt3.04□□□□□ -1.92
PEX28P38848 POL2YNL262W 6669 nt3.04□□□□□ -1.92
PEX28P38848 RCY1YJL204C 2523 nt3.03□□□□□ -1.92
PEX28P38848 GCN1YGL195W 8019 nt3.03□□□□□ -1.92
PEX28P38848 YJL150WYJL150W 303 nt3.03□□□□□ -1.92
PEX28P38848 VPH1YOR270C 2523 nt3.03□□□□□ -1.92
PEX28P38848 FLO1YAR050W 4614 nt3.03□□□□□ -1.92
PEX28P38848 GIS4YML006C 2325 nt3.03□□□□□ -1.92
PEX28P38848 YER088C-AYER088C-A 324 nt3.02□□□□□ -1.93
PEX28P38848 RGA2YDR379W 3030 nt3.02□□□□□ -1.93
PEX28P38848 ECM21YBL101C 3354 nt3.01□□□□□ -1.93
PEX28P38848 DUG2YBR281C 2637 nt3.01□□□□□ -1.93
PEX28P38848 FAP7YDL166C 594 nt3.01□□□□□ -1.93
PEX28P38848 ERP6YGL002W 651 nt3.01□□□□□ -1.93
PEX28P38848 NOP10YHR072W-A 177 nt3.01□□□□□ -1.93
PEX28P38848 YOR015WYOR015W 360 nt3.01□□□□□ -1.93
PEX28P38848 SEF1YBL066C 3447 nt3.01□□□□□ -1.93
PEX28P38848 CFT2YLR115W 2580 nt3.01□□□□□ -1.93
PEX28P38848 RRP12YPL012W 3687 nt3□□□□□ -1.93
PEX28P38848 DNA2YHR164C 4569 nt3□□□□□ -1.93
PEX28P38848 YBR184WYBR184W 1572 nt3□□□□□ -1.93
PEX28P38848 OLI1Q0130 231 nt3□□□□□ -1.93
PEX28P38848 RRT15YLR162W-A 189 nt3□□□□□ -1.93
PEX28P38848 SMY1YKL079W 1971 nt3□□□□□ -1.93
PEX28P38848 GCV2YMR189W 3105 nt2.99□□□□□ -1.93
PEX28P38848 RPL20AYMR242C 519 nt2.99□□□□□ -1.93
PEX28P38848 CRS5YOR031W 210 nt2.99□□□□□ -1.93
PEX28P38848 KAP123YER110C 3342 nt2.99□□□□□ -1.93
PEX28P38848 PRP39YML046W 1890 nt2.99□□□□□ -1.93
PEX28P38848 SDC25YLL016W 3147 nt2.98□□□□□ -1.93
PEX28P38848 SNT1YCR033W 3681 nt2.98□□□□□ -1.93
PEX28P38848 YBL065WYBL065W 345 nt2.98□□□□□ -1.93
PEX28P38848 YNL170WYNL170W 396 nt2.98□□□□□ -1.93
PEX28P38848 PDE2YOR360C 1581 nt2.98□□□□□ -1.93
PEX28P38848 FIR1YER032W 2631 nt2.98□□□□□ -1.93
PEX28P38848 NOP53YPL146C 1368 nt2.98□□□□□ -1.93
PEX28P38848 CDC27YBL084C 2277 nt2.98□□□□□ -1.93
PEX28P38848 KAP104YBR017C 2757 nt2.97□□□□□ -1.93
PEX28P38848 VPS34YLR240W 2628 nt2.97□□□□□ -1.93
PEX28P38848 YLR149CYLR149C 2193 nt2.97□□□□□ -1.93
PEX28P38848 RIC1YLR039C 3171 nt2.97□□□□□ -1.93
PEX28P38848 SPO71YDR104C 3738 nt2.97□□□□□ -1.93
PEX28P38848 SUL1YBR294W 2580 nt2.97□□□□□ -1.93
PEX28P38848 SSS1YDR086C 243 nt2.97□□□□□ -1.93
PEX28P38848 YDR286CYDR286C 345 nt2.97□□□□□ -1.93
PEX28P38848 YHL005CYHL005C 393 nt2.97□□□□□ -1.93
PEX28P38848 YLR140WYLR140W 327 nt2.97□□□□□ -1.93
PEX28P38848 YLR146W-AYLR146W-A 189 nt2.97□□□□□ -1.93
PEX28P38848 HSC82YMR186W 2118 nt2.97□□□□□ -1.93
PEX28P38848 YMR194C-AYMR194C-A 225 nt2.97□□□□□ -1.93
PEX28P38848 MMS22YLR320W 4365 nt2.97□□□□□ -1.93
PEX28P38848 PLC1YPL268W 2610 nt2.97□□□□□ -1.93
PEX28P38848 RSN1YMR266W 2862 nt2.97□□□□□ -1.93
PEX28P38848 PEP3YLR148W 2757 nt2.96□□□□□ -1.94
PEX28P38848 COS111YBR203W 2775 nt2.96□□□□□ -1.94
PEX28P38848 AI5_ALPHAQ0070 1893 nt2.96□□□□□ -1.94
PEX28P38848 TAE2YPL009C 3117 nt2.96□□□□□ -1.94
PEX28P38848 RPN1YHR027C 2982 nt2.96□□□□□ -1.94
PEX28P38848 SNF5YBR289W 2718 nt2.96□□□□□ -1.94
PEX28P38848 VPS16YPL045W 2397 nt2.95□□□□□ -1.94
PEX28P38848 HEH2YDR458C 1992 nt2.95□□□□□ -1.94
PEX28P38848 RPL6AYML073C 531 nt2.95□□□□□ -1.94
PEX28P38848 GRR1YJR090C 3456 nt2.95□□□□□ -1.94
PEX28P38848 RRM3YHR031C 2172 nt2.95□□□□□ -1.94
PEX28P38848 MDM1YML104C 3384 nt2.95□□□□□ -1.94
PEX28P38848 YEL025CYEL025C 3567 nt2.95□□□□□ -1.94
PEX28P38848 YDR186CYDR186C 2634 nt2.94□□□□□ -1.94
PEX28P38848 MUK1YPL070W 1839 nt2.94□□□□□ -1.94
PEX28P38848 INP2YMR163C 2118 nt2.94□□□□□ -1.94
PEX28P38848 SSQ1YLR369W 1974 nt2.94□□□□□ -1.94
PEX28P38848 PXA2YKL188C 2562 nt2.94□□□□□ -1.94
PEX28P38848 RTT10YPL183C 3042 nt2.93□□□□□ -1.94
PEX28P38848 SPT21YMR179W 2277 nt2.93□□□□□ -1.94
PEX28P38848 Q0143Q0143 153 nt2.93□□□□□ -1.94
PEX28P38848 INA22YIR024C 651 nt2.93□□□□□ -1.94
PEX28P38848 MIT1YEL007W 2001 nt2.93□□□□□ -1.94
PEX28P38848 DYN1YKR054C 12279 nt2.92□□□□□ -1.94
PEX28P38848 ACB1YGR037C 264 nt2.92□□□□□ -1.94
PEX28P38848 snR43snR43 209 nt2.92□□□□□ -1.94
PEX28P38848 CRM1YGR218W 3255 nt2.92□□□□□ -1.94
PEX28P38848 SSN2YDR443C 4263 nt2.92□□□□□ -1.94
PEX28P38848 AFI1YOR129C 2682 nt2.92□□□□□ -1.94
PEX28P38848 TAO3YIL129C 7131 nt2.92□□□□□ -1.94
PEX28P38848 NFT1YKR103W 3657 nt2.91□□□□□ -1.94
PEX28P38848 SCH9YHR205W 2475 nt2.91□□□□□ -1.94
PEX28P38848 YAL042C-AYAL042C-A 378 nt2.91□□□□□ -1.94
PEX28P38848 RPS21AYKR057W 264 nt2.91□□□□□ -1.94
PEX28P38848 YBR277CYBR277C 402 nt2.91□□□□□ -1.94
PEX28P38848 ILS1YBL076C 3219 nt2.91□□□□□ -1.94
PEX28P38848 VPS54YDR027C 2670 nt2.91□□□□□ -1.94
PEX28P38848 CSR2YPR030W 3366 nt2.91□□□□□ -1.94
PEX28P38848 INP53YOR109W 3324 nt2.9□□□□□ -1.94
PEX28P38848 tW(CCA)G1tW(CCA)G1 72 nt2.9□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 21.5 ms