Protein–RNA interactions for Protein: P34223

SHP1, UBX domain-containing protein 1, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHP1P34223 YGL024WYGL024W 336 nt2.1□□□□□ -2.07
SHP1P34223 Q0142Q0142 177 nt2.1□□□□□ -2.07
SHP1P34223 RPS17AYML024W 411 nt2.1□□□□□ -2.07
SHP1P34223 YMR272W-BYMR272W-B 108 nt2.1□□□□□ -2.07
SHP1P34223 YPL238CYPL238C 390 nt2.1□□□□□ -2.07
SHP1P34223 VMA9YCL005W-A 222 nt2.1□□□□□ -2.07
SHP1P34223 SOK2YMR016C 2358 nt2.1□□□□□ -2.07
SHP1P34223 DAS1YJL149W 1992 nt2.1□□□□□ -2.07
SHP1P34223 CDC53YDL132W 2448 nt2.1□□□□□ -2.07
SHP1P34223 SET2YJL168C 2202 nt2.1□□□□□ -2.07
SHP1P34223 YFH1YDL120W 525 nt2.09□□□□□ -2.07
SHP1P34223 ATG31YDR022C 591 nt2.09□□□□□ -2.07
SHP1P34223 QCR7YDR529C 384 nt2.09□□□□□ -2.07
SHP1P34223 RTT102YGR275W 474 nt2.09□□□□□ -2.07
SHP1P34223 YHL046W-AYHL046W-A 327 nt2.09□□□□□ -2.07
SHP1P34223 YHR180W-AYHR180W-A 183 nt2.09□□□□□ -2.07
SHP1P34223 YAR047CYAR047C 321 nt2.09□□□□□ -2.07
SHP1P34223 YBL071CYBL071C 309 nt2.09□□□□□ -2.07
SHP1P34223 YOR146WYOR146W 306 nt2.09□□□□□ -2.07
SHP1P34223 YBR121C-AYBR121C-A 159 nt2.09□□□□□ -2.07
SHP1P34223 GIP3YPL137C 3831 nt2.09□□□□□ -2.08
SHP1P34223 YRB1YDR002W 606 nt2.08□□□□□ -2.08
SHP1P34223 RGA1YOR127W 3024 nt2.08□□□□□ -2.08
SHP1P34223 TIM9YEL020W-A 264 nt2.07□□□□□ -2.08
SHP1P34223 UTP30YKR060W 825 nt2.07□□□□□ -2.08
SHP1P34223 VMR1YHL035C 4779 nt2.07□□□□□ -2.08
SHP1P34223 YJR098CYJR098C 1971 nt2.07□□□□□ -2.08
SHP1P34223 STB4YMR019W 2850 nt2.06□□□□□ -2.08
SHP1P34223 YGL069CYGL069C 465 nt2.06□□□□□ -2.08
SHP1P34223 YOR333CYOR333C 417 nt2.06□□□□□ -2.08
SHP1P34223 GPX2YBR244W 489 nt2.06□□□□□ -2.08
SHP1P34223 CRM1YGR218W 3255 nt2.06□□□□□ -2.08
SHP1P34223 PEP1YBL017C 4740 nt2.06□□□□□ -2.08
SHP1P34223 SCH9YHR205W 2475 nt2.06□□□□□ -2.08
SHP1P34223 BNI1YNL271C 5862 nt2.05□□□□□ -2.08
SHP1P34223 YOR029WYOR029W 336 nt2.05□□□□□ -2.08
SHP1P34223 YBR012CYBR012C 420 nt2.05□□□□□ -2.08
SHP1P34223 GNT1YOR320C 1476 nt2.05□□□□□ -2.08
SHP1P34223 RIC1YLR039C 3171 nt2.05□□□□□ -2.08
SHP1P34223 CDC27YBL084C 2277 nt2.05□□□□□ -2.08
SHP1P34223 SEC31YDL195W 3822 nt2.04□□□□□ -2.08
SHP1P34223 YDR286CYDR286C 345 nt2.04□□□□□ -2.08
SHP1P34223 YER137W-AYER137W-A 306 nt2.04□□□□□ -2.08
SHP1P34223 HOP2YGL033W 657 nt2.04□□□□□ -2.08
SHP1P34223 MET18YIL128W 3099 nt2.04□□□□□ -2.08
SHP1P34223 HIT1YJR055W 495 nt2.04□□□□□ -2.08
SHP1P34223 LYS9YNR050C 1341 nt2.04□□□□□ -2.08
SHP1P34223 YOR394C-AYOR394C-A 168 nt2.04□□□□□ -2.08
SHP1P34223 NOT5YPR072W 1683 nt2.04□□□□□ -2.08
SHP1P34223 MCD1YDL003W 1701 nt2.03□□□□□ -2.08
SHP1P34223 YBL012CYBL012C 402 nt2.03□□□□□ -2.08
SHP1P34223 YML009C-AYML009C-A 327 nt2.03□□□□□ -2.08
SHP1P34223 YLR149CYLR149C 2193 nt2.03□□□□□ -2.08
SHP1P34223 HSK3YKL138C-A 210 nt2.02□□□□□ -2.09
SHP1P34223 YBR224WYBR224W 516 nt2.02□□□□□ -2.09
SHP1P34223 MNE1YOR350C 1992 nt2.01□□□□□ -2.09
SHP1P34223 YHR028W-AYHR028W-A 321 nt2.01□□□□□ -2.09
SHP1P34223 YPR099CYPR099C 357 nt2.01□□□□□ -2.09
SHP1P34223 DOT6YER088C 2013 nt2.01□□□□□ -2.09
SHP1P34223 WIP1YDR374W-A 270 nt2□□□□□ -2.09
SHP1P34223 YGL239CYGL239C 315 nt2□□□□□ -2.09
SHP1P34223 YOR121CYOR121C 306 nt2□□□□□ -2.09
SHP1P34223 YPL182CYPL182C 384 nt2□□□□□ -2.09
SHP1P34223 UBP2YOR124C 3819 nt1.99□□□□□ -2.09
SHP1P34223 STH1YIL126W 4080 nt1.99□□□□□ -2.09
SHP1P34223 RTT107YHR154W 3213 nt1.99□□□□□ -2.09
SHP1P34223 YPR097WYPR097W 3222 nt1.99□□□□□ -2.09
SHP1P34223 RBK1YCR036W 1002 nt1.99□□□□□ -2.09
SHP1P34223 VPH1YOR270C 2523 nt1.99□□□□□ -2.09
SHP1P34223 PEP3YLR148W 2757 nt1.99□□□□□ -2.09
SHP1P34223 NOP14YDL148C 2433 nt1.99□□□□□ -2.09
SHP1P34223 CHC1YGL206C 4962 nt1.98□□□□□ -2.09
SHP1P34223 TRL1YJL087C 2484 nt1.98□□□□□ -2.09
SHP1P34223 COS111YBR203W 2775 nt1.98□□□□□ -2.09
SHP1P34223 YDL011CYDL011C 324 nt1.98□□□□□ -2.09
SHP1P34223 YDL152WYDL152W 366 nt1.98□□□□□ -2.09
SHP1P34223 YDR524W-CYDR524W-C 90 nt1.98□□□□□ -2.09
SHP1P34223 YIL066W-AYIL066W-A 444 nt1.98□□□□□ -2.09
SHP1P34223 RPL9BYNL067W 576 nt1.98□□□□□ -2.09
SHP1P34223 USO1YDL058W 5373 nt1.97□□□□□ -2.09
SHP1P34223 YBL083CYBL083C 426 nt1.97□□□□□ -2.09
SHP1P34223 MNL2YLR057W 2550 nt1.97□□□□□ -2.09
SHP1P34223 PAN3YKL025C 2040 nt1.96□□□□□ -2.09
SHP1P34223 DIS3YOL021C 3006 nt1.96□□□□□ -2.1
SHP1P34223 SMY1YKL079W 1971 nt1.96□□□□□ -2.1
SHP1P34223 RUD3YOR216C 1455 nt1.96□□□□□ -2.1
SHP1P34223 IRC20YLR247C 4671 nt1.96□□□□□ -2.1
SHP1P34223 YLR053CYLR053C 327 nt1.96□□□□□ -2.1
SHP1P34223 YBR184WYBR184W 1572 nt1.96□□□□□ -2.1
SHP1P34223 TOR2YKL203C 7425 nt1.96□□□□□ -2.1
SHP1P34223 SEF1YBL066C 3447 nt1.95□□□□□ -2.1
SHP1P34223 YDL062WYDL062W 426 nt1.95□□□□□ -2.1
SHP1P34223 YAP6YDR259C 1152 nt1.95□□□□□ -2.1
SHP1P34223 YGR035CYGR035C 351 nt1.95□□□□□ -2.1
SHP1P34223 YHL037CYHL037C 402 nt1.95□□□□□ -2.1
SHP1P34223 YHR071C-AYHR071C-A 321 nt1.95□□□□□ -2.1
SHP1P34223 RPL26AYLR344W 384 nt1.95□□□□□ -2.1
SHP1P34223 NEO1YIL048W 3456 nt1.94□□□□□ -2.1
SHP1P34223 YKR075W-AYKR075W-A 270 nt1.94□□□□□ -2.1
SHP1P34223 PGA1YNL158W 597 nt1.94□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 51.8 ms