Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 COS111YBR203W 2775 nt2.94□□□□□ -1.94 RIP-Chip
PUB1P32588 DUF1YOL087C 3351 nt2.94□□□□□ -1.94
PUB1P32588 INP2YMR163C 2118 nt2.93□□□□□ -1.94
PUB1P32588 POL2YNL262W 6669 nt2.93□□□□□ -1.94
PUB1P32588 APC11YDL008W 498 nt2.93□□□□□ -1.94
PUB1P32588 EMC6YLL014W 327 nt2.93□□□□□ -1.94 RIP-Chip
PUB1P32588 RSF2YJR127C 4143 nt2.93□□□□□ -1.94
PUB1P32588 BCH1YMR237W 2175 nt2.93□□□□□ -1.94
PUB1P32588 RLI1YDR091C 1827 nt2.92□□□□□ -1.94 RIP-Chip
PUB1P32588 tC(GCA)BtC(GCA)B 72 nt2.92□□□□□ -1.94
PUB1P32588 tC(GCA)GtC(GCA)G 72 nt2.92□□□□□ -1.94
PUB1P32588 tC(GCA)P1tC(GCA)P1 72 nt2.92□□□□□ -1.94
PUB1P32588 tC(GCA)P2tC(GCA)P2 72 nt2.92□□□□□ -1.94
PUB1P32588 PHM6YDR281C 315 nt2.92□□□□□ -1.94 RIP-Chip
PUB1P32588 YEL032C-AYEL032C-A 162 nt2.92□□□□□ -1.94
PUB1P32588 tS(GCU)Q1tS(GCU)Q1 86 nt2.92□□□□□ -1.94
PUB1P32588 YNL211CYNL211C 261 nt2.92□□□□□ -1.94 RIP-Chip
PUB1P32588 YBR221W-AYBR221W-A 105 nt2.92□□□□□ -1.94
PUB1P32588 DRS2YAL026C 4068 nt2.92□□□□□ -1.94
PUB1P32588 ERB1YMR049C 2424 nt2.92□□□□□ -1.94
PUB1P32588 YHR080CYHR080C 4038 nt2.92□□□□□ -1.94
PUB1P32588 FLO10YKR102W 3510 nt2.92□□□□□ -1.94
PUB1P32588 YMR31YFR049W 372 nt2.91□□□□□ -1.94 RIP-Chip
PUB1P32588 YIL174WYIL174W 228 nt2.91□□□□□ -1.94
PUB1P32588 YJL222W-AYJL222W-A 228 nt2.91□□□□□ -1.94
PUB1P32588 YAL064W-BYAL064W-B 381 nt2.91□□□□□ -1.94
PUB1P32588 ZRG17YNR039C 1818 nt2.91□□□□□ -1.94
PUB1P32588 PSO2YMR137C 1986 nt2.91□□□□□ -1.94
PUB1P32588 CHS2YBR038W 2892 nt2.9□□□□□ -1.94 RIP-Chip
PUB1P32588 ATP7YKL016C 525 nt2.9□□□□□ -1.95 RIP-Chip
PUB1P32588 ELG1YOR144C 2376 nt2.9□□□□□ -1.95
PUB1P32588 CCM1YGR150C 2595 nt2.9□□□□□ -1.95
PUB1P32588 SGD1YLR336C 2700 nt2.9□□□□□ -1.95
PUB1P32588 FLO5YHR211W 3228 nt2.89□□□□□ -1.95
PUB1P32588 YMR317WYMR317W 3423 nt2.89□□□□□ -1.95
PUB1P32588 GRX8YLR364W 330 nt2.89□□□□□ -1.95
PUB1P32588 MET10YFR030W 3108 nt2.89□□□□□ -1.95
PUB1P32588 VPH1YOR270C 2523 nt2.89□□□□□ -1.95
PUB1P32588 POL1YNL102W 4407 nt2.88□□□□□ -1.95
PUB1P32588 OST4YDL232W 111 nt2.88□□□□□ -1.95 RIP-Chip
PUB1P32588 YFR012W-AYFR012W-A 87 nt2.88□□□□□ -1.95
PUB1P32588 YGR050CYGR050C 357 nt2.88□□□□□ -1.95
PUB1P32588 GIS4YML006C 2325 nt2.88□□□□□ -1.95
PUB1P32588 HFM1YGL251C 3564 nt2.88□□□□□ -1.95
PUB1P32588 NAB3YPL190C 2409 nt2.88□□□□□ -1.95 RIP-Chip
PUB1P32588 YTA7YGR270W 4140 nt2.87□□□□□ -1.95
PUB1P32588 BUD4YJR092W 4344 nt2.87□□□□□ -1.95
PUB1P32588 FLO9YAL063C 3969 nt2.87□□□□□ -1.95
PUB1P32588 YDL196WYDL196W 330 nt2.87□□□□□ -1.95
PUB1P32588 VMA9YCL005W-A 222 nt2.87□□□□□ -1.95 RIP-Chip
PUB1P32588 SEC15YGL233W 2733 nt2.87□□□□□ -1.95
PUB1P32588 YDR239CYDR239C 2364 nt2.87□□□□□ -1.95
PUB1P32588 CHO2YGR157W 2610 nt2.87□□□□□ -1.95 RIP-Chip
PUB1P32588 SNQ2YDR011W 4506 nt2.86□□□□□ -1.95 RIP-Chip
PUB1P32588 VPS34YLR240W 2628 nt2.86□□□□□ -1.95
PUB1P32588 RRM3YHR031C 2172 nt2.86□□□□□ -1.95
PUB1P32588 YLR149CYLR149C 2193 nt2.86□□□□□ -1.95
PUB1P32588 AHC1YOR023C 1701 nt2.86□□□□□ -1.95
PUB1P32588 NUP120YKL057C 3114 nt2.86□□□□□ -1.95 RIP-Chip
PUB1P32588 TIM11YDR322C-A 291 nt2.86□□□□□ -1.95
PUB1P32588 HYP2YEL034W 474 nt2.86□□□□□ -1.95 RIP-Chip
PUB1P32588 CMC4YMR194C-B 222 nt2.86□□□□□ -1.95 RIP-Chip
PUB1P32588 CDC31YOR257W 486 nt2.86□□□□□ -1.95
PUB1P32588 SPO14YKR031C 5052 nt2.86□□□□□ -1.95
PUB1P32588 YIL080WYIL080W 4722 nt2.86□□□□□ -1.95
PUB1P32588 TOP1YOL006C 2310 nt2.86□□□□□ -1.95
PUB1P32588 ZDS2YML109W 2829 nt2.86□□□□□ -1.95
PUB1P32588 EXO84YBR102C 2262 nt2.85□□□□□ -1.95
PUB1P32588 RSN1YMR266W 2862 nt2.85□□□□□ -1.95
PUB1P32588 tL(UAA)QtL(UAA)Q 85 nt2.85□□□□□ -1.95
PUB1P32588 MPH1YIR002C 2982 nt2.85□□□□□ -1.95
PUB1P32588 YMR122W-AYMR122W-A 255 nt2.85□□□□□ -1.95 RIP-Chip
PUB1P32588 YBR174CYBR174C 315 nt2.85□□□□□ -1.95
PUB1P32588 ITC1YGL133W 3795 nt2.85□□□□□ -1.95
PUB1P32588 PFF1YBR074W 2931 nt2.84□□□□□ -1.95 RIP-Chip
PUB1P32588 snR62snR62 100 nt2.84□□□□□ -1.95
PUB1P32588 YGL014C-AYGL014C-A 162 nt2.84□□□□□ -1.95
PUB1P32588 PXA2YKL188C 2562 nt2.84□□□□□ -1.96
PUB1P32588 NTO1YPR031W 2247 nt2.84□□□□□ -1.96
PUB1P32588 GRR1YJR090C 3456 nt2.83□□□□□ -1.96 RIP-Chip
PUB1P32588 KAP95YLR347C 2586 nt2.83□□□□□ -1.96 RIP-Chip
PUB1P32588 SPO75YLL005C 2607 nt2.83□□□□□ -1.96
PUB1P32588 SYT1YPR095C 3681 nt2.83□□□□□ -1.96
PUB1P32588 YDL025W-AYDL025W-A 105 nt2.83□□□□□ -1.96
PUB1P32588 PAU10YDR542W 363 nt2.83□□□□□ -1.96
PUB1P32588 PAU11YGL261C 363 nt2.83□□□□□ -1.96
PUB1P32588 YLL019W-AYLL019W-A 93 nt2.83□□□□□ -1.96
PUB1P32588 PAU4YLR461W 363 nt2.83□□□□□ -1.96
PUB1P32588 TMA108YIL137C 2841 nt2.83□□□□□ -1.96
PUB1P32588 NCA2YPR155C 1851 nt2.83□□□□□ -1.96
PUB1P32588 HAL9YOL089C 3093 nt2.83□□□□□ -1.96
PUB1P32588 VBA4YDR119W 2307 nt2.82□□□□□ -1.96 RIP-Chip
PUB1P32588 YDR034C-DYDR034C-D 5313 nt2.82□□□□□ -1.96
PUB1P32588 PHD1YKL043W 1101 nt2.82□□□□□ -1.96 RIP-Chip
PUB1P32588 YPL044CYPL044C 549 nt2.82□□□□□ -1.96
PUB1P32588 AKR1YDR264C 2295 nt2.82□□□□□ -1.96 RIP-Chip
PUB1P32588 FAR1YJL157C 2493 nt2.82□□□□□ -1.96 RIP-Chip
PUB1P32588 PEP3YLR148W 2757 nt2.82□□□□□ -1.96
PUB1P32588 PSK2YOL045W 3306 nt2.81□□□□□ -1.96
PUB1P32588 APL5YPL195W 2799 nt2.81□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 218.7 ms