Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.67■□□□□ 0.42
CCL2P13500 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.67■□□□□ 0.42
CCL2P13500 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL2P13500 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL2P13500 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCL2P13500 MIPEPP3-201ENST00000412105 444 ntBASIC17.67■□□□□ 0.42
CCL2P13500 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.67■□□□□ 0.42
CCL2P13500 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.67■□□□□ 0.42
CCL2P13500 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL2P13500 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL2P13500 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL2P13500 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL2P13500 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.67■□□□□ 0.42
CCL2P13500 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCL2P13500 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCL2P13500 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL2P13500 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL2P13500 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCL2P13500 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL2P13500 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCL2P13500 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL2P13500 ID1-201ENST00000376105 1233 ntBASIC17.66■□□□□ 0.42
CCL2P13500 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCL2P13500 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL2P13500 LSM12P1-201ENST00000411836 588 ntBASIC17.66■□□□□ 0.42
CCL2P13500 AL138781.1-201ENST00000566567 1274 ntBASIC17.66■□□□□ 0.42
CCL2P13500 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCL2P13500 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL2P13500 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL2P13500 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCL2P13500 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCL2P13500 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL2P13500 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL2P13500 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCL2P13500 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CCL2P13500 KRT8P36-201ENST00000489121 1440 ntBASIC17.65■□□□□ 0.42
CCL2P13500 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCL2P13500 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL2P13500 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL2P13500 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL2P13500 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL2P13500 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL2P13500 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL2P13500 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CCL2P13500 AL355802.2-201ENST00000402069 882 ntBASIC17.65■□□□□ 0.42
CCL2P13500 PGM5P4-201ENST00000421970 445 ntBASIC17.65■□□□□ 0.42
CCL2P13500 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.65■□□□□ 0.42
CCL2P13500 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.65■□□□□ 0.42
CCL2P13500 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.65■□□□□ 0.42
CCL2P13500 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCL2P13500 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCL2P13500 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL2P13500 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCL2P13500 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL2P13500 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL2P13500 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.65■□□□□ 0.42
CCL2P13500 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCL2P13500 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL2P13500 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCL2P13500 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL2P13500 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCL2P13500 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.64■□□□□ 0.41
CCL2P13500 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL2P13500 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL2P13500 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL2P13500 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL2P13500 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.64■□□□□ 0.41
CCL2P13500 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.64■□□□□ 0.41
CCL2P13500 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.64■□□□□ 0.41
CCL2P13500 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.64■□□□□ 0.41
CCL2P13500 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL2P13500 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL2P13500 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL2P13500 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL2P13500 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.64■□□□□ 0.41
CCL2P13500 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.63■□□□□ 0.41
CCL2P13500 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL2P13500 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCL2P13500 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCL2P13500 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL2P13500 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.63■□□□□ 0.41
CCL2P13500 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCL2P13500 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL2P13500 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL2P13500 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL2P13500 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL2P13500 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.63■□□□□ 0.41
CCL2P13500 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.63■□□□□ 0.41
CCL2P13500 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL2P13500 AC098934.4-201ENST00000564127 592 ntBASIC17.63■□□□□ 0.41
CCL2P13500 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.63■□□□□ 0.41
CCL2P13500 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL2P13500 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CCL2P13500 AL589743.5-201ENST00000616611 1050 ntBASIC17.63■□□□□ 0.41
CCL2P13500 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCL2P13500 AC105020.6-201ENST00000621523 1217 ntBASIC17.63■□□□□ 0.41
CCL2P13500 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL2P13500 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL2P13500 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL2P13500 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms