Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 AC068338.2-201ENST00000563278 1430 ntBASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 AC011484.1-201ENST00000377652 1995 ntBASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 CYP2T1P-201ENST00000432607 1285 ntBASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV23-1A0A0A0MS06 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 AL157384.1-201ENST00000445995 2473 ntBASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 OR10C1-204ENST00000622521 1039 ntBASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV23-1A0A0A0MS06 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 MIR663A-201ENST00000385250 93 ntBASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 AC006970.2-201ENST00000450065 779 ntBASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 RARRES2P4-201ENST00000514074 484 ntBASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 AC121338.2-201ENST00000622535 1744 ntBASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms