Protein–RNA interactions for Protein: Q12200

NCR1, NPC intracellular cholesterol transporter 1-related protein 1, yeastyeast

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NCR1Q12200 ISA1YLL027W 753 nt4.31□□□□□ -1.72
NCR1Q12200 ECM16YMR128W 3804 nt4.29□□□□□ -1.72
NCR1Q12200 YCF1YDR135C 4548 nt4.29□□□□□ -1.72
NCR1Q12200 LYS2YBR115C 4179 nt4.29□□□□□ -1.72
NCR1Q12200 PHD1YKL043W 1101 nt4.29□□□□□ -1.72
NCR1Q12200 YKR075W-AYKR075W-A 270 nt4.29□□□□□ -1.72
NCR1Q12200 INP2YMR163C 2118 nt4.29□□□□□ -1.72
NCR1Q12200 OAF3YKR064W 2592 nt4.29□□□□□ -1.72
NCR1Q12200 YPR003CYPR003C 2265 nt4.29□□□□□ -1.72
NCR1Q12200 GLN4YOR168W 2430 nt4.29□□□□□ -1.72
NCR1Q12200 KAP104YBR017C 2757 nt4.28□□□□□ -1.72
NCR1Q12200 BBC1YJL020C 3474 nt4.28□□□□□ -1.72
NCR1Q12200 LSO2YGR169C-A 279 nt4.28□□□□□ -1.72
NCR1Q12200 YLL019W-AYLL019W-A 93 nt4.28□□□□□ -1.72
NCR1Q12200 YMR175W-AYMR175W-A 195 nt4.28□□□□□ -1.72
NCR1Q12200 COG3YER157W 2406 nt4.28□□□□□ -1.72
NCR1Q12200 ERB1YMR049C 2424 nt4.28□□□□□ -1.72
NCR1Q12200 ECM5YMR176W 4236 nt4.28□□□□□ -1.72
NCR1Q12200 ATG13YPR185W 2217 nt4.27□□□□□ -1.73
NCR1Q12200 SKT5YBL061C 2091 nt4.27□□□□□ -1.73
NCR1Q12200 VHS3YOR054C 2025 nt4.27□□□□□ -1.73
NCR1Q12200 VID28YIL017C 2766 nt4.27□□□□□ -1.73
NCR1Q12200 CAT2YML042W 2013 nt4.26□□□□□ -1.73
NCR1Q12200 PUF4YGL014W 2667 nt4.26□□□□□ -1.73
NCR1Q12200 YDL176WYDL176W 2127 nt4.26□□□□□ -1.73
NCR1Q12200 SOD1YJR104C 465 nt4.26□□□□□ -1.73
NCR1Q12200 SEN1YLR430W 6696 nt4.26□□□□□ -1.73
NCR1Q12200 DOT6YER088C 2013 nt4.26□□□□□ -1.73
NCR1Q12200 EGT2YNL327W 3126 nt4.25□□□□□ -1.73
NCR1Q12200 YHL006W-AYHL006W-A 354 nt4.25□□□□□ -1.73
NCR1Q12200 SPO75YLL005C 2607 nt4.25□□□□□ -1.73
NCR1Q12200 CHS6YJL099W 2241 nt4.25□□□□□ -1.73
NCR1Q12200 NUP85YJR042W 2235 nt4.25□□□□□ -1.73
NCR1Q12200 ISW2YOR304W 3363 nt4.24□□□□□ -1.73
NCR1Q12200 YNR065CYNR065C 3351 nt4.23□□□□□ -1.73
NCR1Q12200 PFK1YGR240C 2964 nt4.23□□□□□ -1.73
NCR1Q12200 YKL096C-BYKL096C-B 150 nt4.23□□□□□ -1.73
NCR1Q12200 LEU3YLR451W 2661 nt4.23□□□□□ -1.73
NCR1Q12200 CHL1YPL008W 2586 nt4.22□□□□□ -1.73
NCR1Q12200 YKL162C-AYKL162C-A 153 nt4.22□□□□□ -1.73
NCR1Q12200 RPO21YDL140C 5202 nt4.22□□□□□ -1.73
NCR1Q12200 RSC3YDR303C 2658 nt4.21□□□□□ -1.73
NCR1Q12200 SGD1YLR336C 2700 nt4.21□□□□□ -1.74
NCR1Q12200 RPS8AYBL072C 603 nt4.21□□□□□ -1.74
NCR1Q12200 HOS3YPL116W 2094 nt4.21□□□□□ -1.74
NCR1Q12200 MPS1YDL028C 2295 nt4.21□□□□□ -1.74
NCR1Q12200 PBY1YBR094W 2262 nt4.21□□□□□ -1.74
NCR1Q12200 NAM2YLR382C 2685 nt4.2□□□□□ -1.74
NCR1Q12200 SLM2YNL047C 1971 nt4.2□□□□□ -1.74
NCR1Q12200 KHA1YJL094C 2622 nt4.2□□□□□ -1.74
NCR1Q12200 PEP5YMR231W 3090 nt4.2□□□□□ -1.74
NCR1Q12200 YPK9YOR291W 4419 nt4.2□□□□□ -1.74
NCR1Q12200 COS111YBR203W 2775 nt4.19□□□□□ -1.74
NCR1Q12200 YPR089WYPR089W 2667 nt4.19□□□□□ -1.74
NCR1Q12200 SRP14YDL092W 441 nt4.19□□□□□ -1.74
NCR1Q12200 YDR193WYDR193W 399 nt4.19□□□□□ -1.74
NCR1Q12200 YKL156C-AYKL156C-A 117 nt4.19□□□□□ -1.74
NCR1Q12200 BFR2YDR299W 1605 nt4.19□□□□□ -1.74
NCR1Q12200 SNF2YOR290C 5112 nt4.19□□□□□ -1.74
NCR1Q12200 NUP120YKL057C 3114 nt4.19□□□□□ -1.74
NCR1Q12200 VMA1YDL185W 3216 nt4.18□□□□□ -1.74
NCR1Q12200 USA1YML029W 2517 nt4.18□□□□□ -1.74
NCR1Q12200 RPS26AYGL189C 360 nt4.18□□□□□ -1.74
NCR1Q12200 YLR154W-BYLR154W-B 165 nt4.18□□□□□ -1.74
NCR1Q12200 MTR10YOR160W 2919 nt4.18□□□□□ -1.74
NCR1Q12200 IES6YEL044W 501 nt4.17□□□□□ -1.74
NCR1Q12200 YIL134C-AYIL134C-A 204 nt4.17□□□□□ -1.74
NCR1Q12200 SEC15YGL233W 2733 nt4.17□□□□□ -1.74
NCR1Q12200 GIN4YDR507C 3429 nt4.17□□□□□ -1.74
NCR1Q12200 AIM44YPL158C 2277 nt4.16□□□□□ -1.74
NCR1Q12200 RPL20AYMR242C 519 nt4.16□□□□□ -1.74
NCR1Q12200 PDR5YOR153W 4536 nt4.16□□□□□ -1.74
NCR1Q12200 NCR1YPL006W 3513 nt4.16□□□□□ -1.74
NCR1Q12200 APL1YJR005W 2103 nt4.15□□□□□ -1.74
NCR1Q12200 RRN6YBL014C 2685 nt4.15□□□□□ -1.74
NCR1Q12200 snR43snR43 209 nt4.15□□□□□ -1.75
NCR1Q12200 snR50snR50 90 nt4.15□□□□□ -1.75
NCR1Q12200 OSH2YDL019C 3852 nt4.15□□□□□ -1.75
NCR1Q12200 MCM7YBR202W 2538 nt4.15□□□□□ -1.75
NCR1Q12200 SRO7YPR032W 3102 nt4.15□□□□□ -1.75
NCR1Q12200 TRK1YJL129C 3708 nt4.14□□□□□ -1.75
NCR1Q12200 COX19YLL018C-A 297 nt4.14□□□□□ -1.75
NCR1Q12200 NMA111YNL123W 2994 nt4.14□□□□□ -1.75
NCR1Q12200 YBR225WYBR225W 2703 nt4.13□□□□□ -1.75
NCR1Q12200 GIP4YAL031C 2283 nt4.13□□□□□ -1.75
NCR1Q12200 snR64snR64 101 nt4.13□□□□□ -1.75
NCR1Q12200 YCR102W-AYCR102W-A 198 nt4.13□□□□□ -1.75
NCR1Q12200 PAU3YCR104W 375 nt4.13□□□□□ -1.75
NCR1Q12200 RPS17BYDR447C 411 nt4.13□□□□□ -1.75
NCR1Q12200 YHR032W-AYHR032W-A 180 nt4.13□□□□□ -1.75
NCR1Q12200 RPL42BYHR141C 321 nt4.13□□□□□ -1.75
NCR1Q12200 YOL083C-AYOL083C-A 141 nt4.13□□□□□ -1.75
NCR1Q12200 NIP100YPL174C 2607 nt4.12□□□□□ -1.75
NCR1Q12200 YNL018CYNL018C 1839 nt4.12□□□□□ -1.75
NCR1Q12200 FMP16YDR070C 282 nt4.12□□□□□ -1.75
NCR1Q12200 MTC4YBR255W 2085 nt4.12□□□□□ -1.75
NCR1Q12200 TCO89YPL180W 2400 nt4.11□□□□□ -1.75
NCR1Q12200 SPC98YNL126W 2541 nt4.11□□□□□ -1.75
NCR1Q12200 YJL120WYJL120W 324 nt4.11□□□□□ -1.75
NCR1Q12200 YJR112W-AYJR112W-A 330 nt4.11□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 33.4 ms