Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 VID27YNL212W 2349 nt3.39□□□□□ -1.87
TY1A-MR1Q04215 YEL032C-AYEL032C-A 162 nt3.39□□□□□ -1.87
TY1A-MR1Q04215 YFR012W-AYFR012W-A 87 nt3.39□□□□□ -1.87
TY1A-MR1Q04215 GRX8YLR364W 330 nt3.39□□□□□ -1.87
TY1A-MR1Q04215 RSM19YNR037C 276 nt3.39□□□□□ -1.87
TY1A-MR1Q04215 YDR239CYDR239C 2364 nt3.38□□□□□ -1.87
TY1A-MR1Q04215 NAB3YPL190C 2409 nt3.38□□□□□ -1.87
TY1A-MR1Q04215 YGR050CYGR050C 357 nt3.38□□□□□ -1.87
TY1A-MR1Q04215 tR(ACG)JtR(ACG)J 73 nt3.38□□□□□ -1.87
TY1A-MR1Q04215 RPL22AYLR061W 366 nt3.38□□□□□ -1.87
TY1A-MR1Q04215 RAD26YJR035W 3258 nt3.38□□□□□ -1.87
TY1A-MR1Q04215 AHC1YOR023C 1701 nt3.38□□□□□ -1.87
TY1A-MR1Q04215 VPS53YJL029C 2469 nt3.37□□□□□ -1.87
TY1A-MR1Q04215 YCG1YDR325W 3108 nt3.37□□□□□ -1.87
TY1A-MR1Q04215 YJR112W-AYJR112W-A 330 nt3.37□□□□□ -1.87
TY1A-MR1Q04215 ECM15YBL001C 315 nt3.37□□□□□ -1.87
TY1A-MR1Q04215 YLR364C-AYLR364C-A 123 nt3.37□□□□□ -1.87
TY1A-MR1Q04215 RPL33AYPL143W 324 nt3.37□□□□□ -1.87
TY1A-MR1Q04215 PUF4YGL014W 2667 nt3.37□□□□□ -1.87
TY1A-MR1Q04215 YGL140CYGL140C 3660 nt3.37□□□□□ -1.87
TY1A-MR1Q04215 APE2YKL157W 2859 nt3.37□□□□□ -1.87
TY1A-MR1Q04215 NCA2YPR155C 1851 nt3.37□□□□□ -1.87
TY1A-MR1Q04215 BCH1YMR237W 2175 nt3.36□□□□□ -1.87
TY1A-MR1Q04215 SAF1YBR280C 1914 nt3.36□□□□□ -1.87
TY1A-MR1Q04215 VPH1YOR270C 2523 nt3.36□□□□□ -1.87
TY1A-MR1Q04215 MCM7YBR202W 2538 nt3.36□□□□□ -1.87
TY1A-MR1Q04215 NUP159YIL115C 4383 nt3.36□□□□□ -1.87
TY1A-MR1Q04215 APC11YDL008W 498 nt3.36□□□□□ -1.87
TY1A-MR1Q04215 TIM11YDR322C-A 291 nt3.36□□□□□ -1.87
TY1A-MR1Q04215 RTC6YPL183W-A 282 nt3.36□□□□□ -1.87
TY1A-MR1Q04215 YBR206WYBR206W 324 nt3.36□□□□□ -1.87
TY1A-MR1Q04215 YBR225WYBR225W 2703 nt3.36□□□□□ -1.87
TY1A-MR1Q04215 GIS4YML006C 2325 nt3.36□□□□□ -1.87
TY1A-MR1Q04215 OSH3YHR073W 2991 nt3.35□□□□□ -1.87
TY1A-MR1Q04215 HYP2YEL034W 474 nt3.35□□□□□ -1.87
TY1A-MR1Q04215 BNI4YNL233W 2679 nt3.35□□□□□ -1.87
TY1A-MR1Q04215 HAL9YOL089C 3093 nt3.34□□□□□ -1.87
TY1A-MR1Q04215 XRN1YGL173C 4587 nt3.34□□□□□ -1.87
TY1A-MR1Q04215 YDL196WYDL196W 330 nt3.34□□□□□ -1.87
TY1A-MR1Q04215 tL(UAA)QtL(UAA)Q 85 nt3.34□□□□□ -1.87
TY1A-MR1Q04215 VMA9YCL005W-A 222 nt3.34□□□□□ -1.87
TY1A-MR1Q04215 YLR352WYLR352W 2424 nt3.34□□□□□ -1.87
TY1A-MR1Q04215 YJL070CYJL070C 2667 nt3.34□□□□□ -1.88
TY1A-MR1Q04215 SGD1YLR336C 2700 nt3.34□□□□□ -1.88
TY1A-MR1Q04215 HFM1YGL251C 3564 nt3.33□□□□□ -1.88
TY1A-MR1Q04215 SOM1YEL059C-A 225 nt3.33□□□□□ -1.88
TY1A-MR1Q04215 CDC31YOR257W 486 nt3.33□□□□□ -1.88
TY1A-MR1Q04215 YBR174CYBR174C 315 nt3.33□□□□□ -1.88
TY1A-MR1Q04215 TAF6YGL112C 1551 nt3.33□□□□□ -1.88
TY1A-MR1Q04215 RLI1YDR091C 1827 nt3.33□□□□□ -1.88
TY1A-MR1Q04215 POL1YNL102W 4407 nt3.32□□□□□ -1.88
TY1A-MR1Q04215 TIM12YBR091C 330 nt3.32□□□□□ -1.88
TY1A-MR1Q04215 YCL046WYCL046W 324 nt3.32□□□□□ -1.88
TY1A-MR1Q04215 KIN2YLR096W 3444 nt3.32□□□□□ -1.88
TY1A-MR1Q04215 YMR31YFR049W 372 nt3.31□□□□□ -1.88
TY1A-MR1Q04215 YGR051CYGR051C 324 nt3.31□□□□□ -1.88
TY1A-MR1Q04215 YPL044CYPL044C 549 nt3.31□□□□□ -1.88
TY1A-MR1Q04215 USA1YML029W 2517 nt3.3□□□□□ -1.88
TY1A-MR1Q04215 HOS4YIL112W 3252 nt3.3□□□□□ -1.88
TY1A-MR1Q04215 EMC1YCL045C 2283 nt3.3□□□□□ -1.88
TY1A-MR1Q04215 YER039C-AYER039C-A 219 nt3.3□□□□□ -1.88
TY1A-MR1Q04215 YLL019W-AYLL019W-A 93 nt3.3□□□□□ -1.88
TY1A-MR1Q04215 PSO2YMR137C 1986 nt3.3□□□□□ -1.88
TY1A-MR1Q04215 LOS1YKL205W 3303 nt3.3□□□□□ -1.88
TY1A-MR1Q04215 SPT16YGL207W 3108 nt3.3□□□□□ -1.88
TY1A-MR1Q04215 VPS34YLR240W 2628 nt3.29□□□□□ -1.88
TY1A-MR1Q04215 FIG4YNL325C 2640 nt3.29□□□□□ -1.88
TY1A-MR1Q04215 RSN1YMR266W 2862 nt3.29□□□□□ -1.88
TY1A-MR1Q04215 NOC3YLR002C 1992 nt3.29□□□□□ -1.88
TY1A-MR1Q04215 TAF1YGR274C 3201 nt3.28□□□□□ -1.88
TY1A-MR1Q04215 NOP4YPL043W 2058 nt3.28□□□□□ -1.88
TY1A-MR1Q04215 DAN4YJR151C 3486 nt3.28□□□□□ -1.88
TY1A-MR1Q04215 YDL118WYDL118W 381 nt3.28□□□□□ -1.88
TY1A-MR1Q04215 NOG1YPL093W 1944 nt3.28□□□□□ -1.88
TY1A-MR1Q04215 EXO84YBR102C 2262 nt3.28□□□□□ -1.88
TY1A-MR1Q04215 NUP120YKL057C 3114 nt3.28□□□□□ -1.88
TY1A-MR1Q04215 PEP3YLR148W 2757 nt3.28□□□□□ -1.89
TY1A-MR1Q04215 CTF4YPR135W 2784 nt3.28□□□□□ -1.89
TY1A-MR1Q04215 PRP22YER013W 3438 nt3.28□□□□□ -1.89
TY1A-MR1Q04215 SPA2YLL021W 4401 nt3.27□□□□□ -1.89
TY1A-MR1Q04215 STF2YGR008C 255 nt3.27□□□□□ -1.89
TY1A-MR1Q04215 SPO75YLL005C 2607 nt3.27□□□□□ -1.89
TY1A-MR1Q04215 APL5YPL195W 2799 nt3.27□□□□□ -1.89
TY1A-MR1Q04215 YLR149CYLR149C 2193 nt3.27□□□□□ -1.89
TY1A-MR1Q04215 XRS2YDR369C 2565 nt3.26□□□□□ -1.89
TY1A-MR1Q04215 YDL242WYDL242W 354 nt3.26□□□□□ -1.89
TY1A-MR1Q04215 ANB1YJR047C 474 nt3.26□□□□□ -1.89
TY1A-MR1Q04215 YOR019WYOR019W 2193 nt3.26□□□□□ -1.89
TY1A-MR1Q04215 GRR1YJR090C 3456 nt3.26□□□□□ -1.89
TY1A-MR1Q04215 ATG13YPR185W 2217 nt3.25□□□□□ -1.89
TY1A-MR1Q04215 FRT2YAL028W 1587 nt3.25□□□□□ -1.89
TY1A-MR1Q04215 SOK1YDR006C 2706 nt3.25□□□□□ -1.89
TY1A-MR1Q04215 YCR087C-AYCR087C-A 462 nt3.25□□□□□ -1.89
TY1A-MR1Q04215 YGL014C-AYGL014C-A 162 nt3.25□□□□□ -1.89
TY1A-MR1Q04215 YNL144CYNL144C 2223 nt3.25□□□□□ -1.89
TY1A-MR1Q04215 CCM1YGR150C 2595 nt3.25□□□□□ -1.89
TY1A-MR1Q04215 PXA2YKL188C 2562 nt3.25□□□□□ -1.89
TY1A-MR1Q04215 NTO1YPR031W 2247 nt3.24□□□□□ -1.89
TY1A-MR1Q04215 PFF1YBR074W 2931 nt3.24□□□□□ -1.89
TY1A-MR1Q04215 ALA1YOR335C 2877 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms