Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UPK1BO75841 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
UPK1BO75841 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UPK1BO75841 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK1BO75841 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK1BO75841 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.74■□□□□ 0.43
UPK1BO75841 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK1BO75841 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.73■□□□□ 0.43
UPK1BO75841 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1BO75841 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1BO75841 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1BO75841 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1BO75841 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.73■□□□□ 0.43
UPK1BO75841 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
UPK1BO75841 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UPK1BO75841 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1BO75841 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UPK1BO75841 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1BO75841 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1BO75841 LINC01465-201ENST00000408887 1940 ntBASIC17.72■□□□□ 0.43
UPK1BO75841 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1BO75841 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UPK1BO75841 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.72■□□□□ 0.43
UPK1BO75841 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.72■□□□□ 0.43
UPK1BO75841 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
UPK1BO75841 AL133373.2-201ENST00000623187 2828 ntBASIC17.72■□□□□ 0.43
UPK1BO75841 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1BO75841 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1BO75841 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1BO75841 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1BO75841 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1BO75841 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.72■□□□□ 0.43
UPK1BO75841 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1BO75841 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.72■□□□□ 0.43
UPK1BO75841 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1BO75841 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.72■□□□□ 0.43
UPK1BO75841 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.72■□□□□ 0.43
UPK1BO75841 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.72■□□□□ 0.43
UPK1BO75841 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
UPK1BO75841 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
UPK1BO75841 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1BO75841 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1BO75841 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1BO75841 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1BO75841 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
UPK1BO75841 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
UPK1BO75841 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
UPK1BO75841 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.71■□□□□ 0.43
UPK1BO75841 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1BO75841 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1BO75841 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.71■□□□□ 0.43
UPK1BO75841 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.71■□□□□ 0.43
UPK1BO75841 KRT18P24-201ENST00000344739 1156 ntBASIC17.71■□□□□ 0.43
UPK1BO75841 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
UPK1BO75841 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.71■□□□□ 0.43
UPK1BO75841 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.71■□□□□ 0.43
UPK1BO75841 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1BO75841 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1BO75841 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.71■□□□□ 0.43
UPK1BO75841 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1BO75841 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1BO75841 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
UPK1BO75841 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.71■□□□□ 0.42
UPK1BO75841 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UPK1BO75841 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UPK1BO75841 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1BO75841 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.7■□□□□ 0.42
UPK1BO75841 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1BO75841 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.7■□□□□ 0.42
UPK1BO75841 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1BO75841 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1BO75841 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.7■□□□□ 0.42
UPK1BO75841 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1BO75841 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.7■□□□□ 0.42
UPK1BO75841 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1BO75841 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.7■□□□□ 0.42
UPK1BO75841 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.7■□□□□ 0.42
UPK1BO75841 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.7■□□□□ 0.42
UPK1BO75841 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1BO75841 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1BO75841 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1BO75841 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.7■□□□□ 0.42
UPK1BO75841 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.7■□□□□ 0.42
UPK1BO75841 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1BO75841 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1BO75841 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1BO75841 AC135050.7-201ENST00000624508 2218 ntBASIC17.7■□□□□ 0.42
UPK1BO75841 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1BO75841 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1BO75841 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
UPK1BO75841 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1BO75841 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms