Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 CHC1YGL206C 4962 nt0.75□□□□□ -2.29
TY1B-HO13535 snR57snR57 88 nt0.75□□□□□ -2.29
TY1B-HO13535 YJL127C-BYJL127C-B 159 nt0.75□□□□□ -2.29
TY1B-HO13535 AZF1YOR113W 2745 nt0.75□□□□□ -2.29
TY1B-HO13535 NUR1YDL089W 1455 nt0.75□□□□□ -2.29
TY1B-HO13535 YDL157CYDL157C 357 nt0.74□□□□□ -2.29
TY1B-HO13535 YDR042CYDR042C 603 nt0.74□□□□□ -2.29
TY1B-HO13535 YGL177WYGL177W 348 nt0.74□□□□□ -2.29
TY1B-HO13535 YDR338CYDR338C 2088 nt0.74□□□□□ -2.29
TY1B-HO13535 VAB2YEL005C 849 nt0.73□□□□□ -2.29
TY1B-HO13535 HYR1YIR037W 492 nt0.73□□□□□ -2.29
TY1B-HO13535 RPB5YBR154C 648 nt0.73□□□□□ -2.29
TY1B-HO13535 ICS2YBR157C 768 nt0.73□□□□□ -2.29
TY1B-HO13535 COX6YHR051W 447 nt0.73□□□□□ -2.29
TY1B-HO13535 YMR178WYMR178W 825 nt0.73□□□□□ -2.29
TY1B-HO13535 RUF20RUF20 443 nt0.73□□□□□ -2.29
TY1B-HO13535 CMC2YBL059C-A 330 nt0.73□□□□□ -2.29
TY1B-HO13535 YOL150CYOL150C 312 nt0.73□□□□□ -2.29
TY1B-HO13535 LST4YKL176C 2487 nt0.73□□□□□ -2.29
TY1B-HO13535 PPN1YDR452W 2025 nt0.72□□□□□ -2.29
TY1B-HO13535 YDR286CYDR286C 345 nt0.72□□□□□ -2.29
TY1B-HO13535 NSL1YPL233W 651 nt0.72□□□□□ -2.29
TY1B-HO13535 ECM25YJL201W 1800 nt0.71□□□□□ -2.3
TY1B-HO13535 ALK1YGL021W 2283 nt0.71□□□□□ -2.3
TY1B-HO13535 AHC2YCR082W 387 nt0.71□□□□□ -2.3
TY1B-HO13535 NSE3YDR288W 912 nt0.71□□□□□ -2.3
TY1B-HO13535 YEL010WYEL010W 351 nt0.71□□□□□ -2.3
TY1B-HO13535 YNL010WYNL010W 726 nt0.71□□□□□ -2.3
TY1B-HO13535 AME1YBR211C 975 nt0.71□□□□□ -2.3
TY1B-HO13535 SAS3YBL052C 2496 nt0.71□□□□□ -2.3
TY1B-HO13535 HIR3YJR140C 4947 nt0.71□□□□□ -2.3
TY1B-HO13535 DGR2YKL121W 2559 nt0.71□□□□□ -2.3
TY1B-HO13535 YER147C-AYER147C-A 411 nt0.7□□□□□ -2.3
TY1B-HO13535 YJL114WYJL114W 681 nt0.7□□□□□ -2.3
TY1B-HO13535 VPS25YJR102C 609 nt0.7□□□□□ -2.3
TY1B-HO13535 YDL025W-AYDL025W-A 105 nt0.7□□□□□ -2.3
TY1B-HO13535 YER088C-AYER088C-A 324 nt0.7□□□□□ -2.3
TY1B-HO13535 BTN2YGR142W 1233 nt0.7□□□□□ -2.3
TY1B-HO13535 YLR458WYLR458W 381 nt0.7□□□□□ -2.3
TY1B-HO13535 SNC2YOR327C 348 nt0.7□□□□□ -2.3
TY1B-HO13535 CUR1YPR158W 759 nt0.7□□□□□ -2.3
TY1B-HO13535 BI3Q0115 1554 nt0.69□□□□□ -2.3
TY1B-HO13535 BFA1YJR053W 1725 nt0.69□□□□□ -2.3
TY1B-HO13535 COG7YGL005C 840 nt0.69□□□□□ -2.3
TY1B-HO13535 NOP10YHR072W-A 177 nt0.69□□□□□ -2.3
TY1B-HO13535 YKE2YLR200W 345 nt0.69□□□□□ -2.3
TY1B-HO13535 YBR032WYBR032W 303 nt0.69□□□□□ -2.3
TY1B-HO13535 FMP23YBR047W 528 nt0.69□□□□□ -2.3
TY1B-HO13535 LSM4YER112W 564 nt0.68□□□□□ -2.3
TY1B-HO13535 CCE1YKL011C 1062 nt0.68□□□□□ -2.3
TY1B-HO13535 YBP2YGL060W 1926 nt0.68□□□□□ -2.3
TY1B-HO13535 YGR250CYGR250C 2346 nt0.68□□□□□ -2.3
TY1B-HO13535 RPL40AYIL148W 387 nt0.68□□□□□ -2.3
TY1B-HO13535 SDL1YIL167W 633 nt0.68□□□□□ -2.3
TY1B-HO13535 NEJ1YLR265C 1029 nt0.68□□□□□ -2.3
TY1B-HO13535 HOP2YGL033W 657 nt0.67□□□□□ -2.3
TY1B-HO13535 PRS3YHL011C 963 nt0.67□□□□□ -2.3
TY1B-HO13535 IMP3YHR148W 552 nt0.67□□□□□ -2.3
TY1B-HO13535 FAR3YMR052W 615 nt0.67□□□□□ -2.3
TY1B-HO13535 YNL171CYNL171C 369 nt0.67□□□□□ -2.3
TY1B-HO13535 YBR051WYBR051W 351 nt0.67□□□□□ -2.3
TY1B-HO13535 SNA4YDL123W 423 nt0.66□□□□□ -2.3
TY1B-HO13535 RPI1YIL119C 1224 nt0.66□□□□□ -2.3
TY1B-HO13535 TAP42YMR028W 1101 nt0.66□□□□□ -2.3
TY1B-HO13535 RPS10BYMR230W 318 nt0.66□□□□□ -2.3
TY1B-HO13535 YNR021WYNR021W 1215 nt0.66□□□□□ -2.3
TY1B-HO13535 snR14snR14 160 nt0.66□□□□□ -2.3
TY1B-HO13535 YJL032WYJL032W 315 nt0.65□□□□□ -2.3
TY1B-HO13535 MVP1YMR004W 1536 nt0.65□□□□□ -2.31
TY1B-HO13535 YDR262WYDR262W 819 nt0.65□□□□□ -2.31
TY1B-HO13535 SPP381YBR152W 876 nt0.65□□□□□ -2.31
TY1B-HO13535 TRS20YBR254C 528 nt0.65□□□□□ -2.31
TY1B-HO13535 RLM1YPL089C 2031 nt0.64□□□□□ -2.31
TY1B-HO13535 DAS1YJL149W 1992 nt0.64□□□□□ -2.31
TY1B-HO13535 LSM7YNL147W 348 nt0.64□□□□□ -2.31
TY1B-HO13535 YJR071WYJR071W 369 nt0.63□□□□□ -2.31
TY1B-HO13535 YKL115CYKL115C 393 nt0.63□□□□□ -2.31
TY1B-HO13535 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
TY1B-HO13535 SMY1YKL079W 1971 nt0.63□□□□□ -2.31
TY1B-HO13535 YIP1YGR172C 747 nt0.62□□□□□ -2.31
TY1B-HO13535 YHL009W-AYHL009W-A 1242 nt0.62□□□□□ -2.31
TY1B-HO13535 GIC1YHR061C 945 nt0.62□□□□□ -2.31
TY1B-HO13535 SPC24YMR117C 642 nt0.62□□□□□ -2.31
TY1B-HO13535 NTC20YBR188C 423 nt0.62□□□□□ -2.31
TY1B-HO13535 NUP120YKL057C 3114 nt0.62□□□□□ -2.31
TY1B-HO13535 PRM8YGL053W 714 nt0.62□□□□□ -2.31
TY1B-HO13535 YOL085W-AYOL085W-A 213 nt0.62□□□□□ -2.31
TY1B-HO13535 MGR1YCL044C 1254 nt0.62□□□□□ -2.31
TY1B-HO13535 CDC27YBL084C 2277 nt0.62□□□□□ -2.31
TY1B-HO13535 KAR9YPL269W 1935 nt0.61□□□□□ -2.31
TY1B-HO13535 TMA20YER007C-A 546 nt0.6□□□□□ -2.31
TY1B-HO13535 SAY1YGR263C 1275 nt0.6□□□□□ -2.31
TY1B-HO13535 YLR042CYLR042C 486 nt0.6□□□□□ -2.31
TY1B-HO13535 YMR173W-AYMR173W-A 1185 nt0.6□□□□□ -2.31
TY1B-HO13535 YBR062CYBR062C 543 nt0.6□□□□□ -2.31
TY1B-HO13535 SEC8YPR055W 3198 nt0.6□□□□□ -2.31
TY1B-HO13535 FAR7YFR008W 666 nt0.6□□□□□ -2.31
TY1B-HO13535 YBR224WYBR224W 516 nt0.6□□□□□ -2.31
TY1B-HO13535 MSC6YOR354C 2079 nt0.6□□□□□ -2.31
TY1B-HO13535 COG8YML071C 1824 nt0.59□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms