Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 C1QBPP2-201ENST00000528754 825 ntBASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF407Q9C0G0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF407Q9C0G0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.33■□□□□ 0.53
ZNF407Q9C0G0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF407Q9C0G0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ZNF407Q9C0G0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF407Q9C0G0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.33■□□□□ 0.53
ZNF407Q9C0G0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF407Q9C0G0 CLDN5-201ENST00000403084 2357 ntBASIC18.33■□□□□ 0.53
ZNF407Q9C0G0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.33■□□□□ 0.53
ZNF407Q9C0G0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.33■□□□□ 0.53
ZNF407Q9C0G0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.33■□□□□ 0.53
ZNF407Q9C0G0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.33■□□□□ 0.53
ZNF407Q9C0G0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF407Q9C0G0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF407Q9C0G0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF407Q9C0G0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF407Q9C0G0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF407Q9C0G0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF407Q9C0G0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF407Q9C0G0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF407Q9C0G0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 AC012618.2-201ENST00000428058 849 ntBASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 MIR2861-201ENST00000636310 90 ntBASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF407Q9C0G0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 C2orf69P4-201ENST00000565394 541 ntBASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 AC007375.3-201ENST00000600936 2314 ntBASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 MTDHP1-201ENST00000605323 784 ntBASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 AL359736.2-201ENST00000621992 437 ntBASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF407Q9C0G0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms