Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 AC079630.1-202ENST00000618127 1840 ntBASIC14.26□□□□□ -0.13
VPS25Q9BRG1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 AC126755.1-201ENST00000525846 6405 ntBASIC14.26□□□□□ -0.13
VPS25Q9BRG1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 FEM1AP4-201ENST00000443167 1987 ntBASIC14.25□□□□□ -0.13
VPS25Q9BRG1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 HLA-L-211ENST00000482052 1765 ntBASIC14.25□□□□□ -0.13
VPS25Q9BRG1 AL391121.1-201ENST00000607967 1349 ntBASIC14.25□□□□□ -0.13
VPS25Q9BRG1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 GABARAPL3-202ENST00000624044 1851 ntBASIC14.25□□□□□ -0.13
VPS25Q9BRG1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VPS25Q9BRG1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 AC009053.2-201ENST00000563701 2365 ntBASIC14.24□□□□□ -0.13
VPS25Q9BRG1 FLJ16779-201ENST00000612722 7638 ntBASIC14.24□□□□□ -0.13
VPS25Q9BRG1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 AC108673.1-201ENST00000510422 1159 ntBASIC14.24□□□□□ -0.13
VPS25Q9BRG1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
VPS25Q9BRG1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms