RNA–Protein interactions for RNA: ENST00000381793.6

RBM47-202, Transcript of RNA binding motif protein 47, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RBM47, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-202ENST00000381793 PELP1Q8IZL8 1130 aaKnown RBP25.27■■□□□ 1.64
RBM47-202ENST00000381793 MYT1Q01538 1121 aa25.03■■□□□ 1.6
RBM47-202ENST00000381793 NISCHQ9Y2I1 1504 aa24.76■■□□□ 1.55
RBM47-202ENST00000381793 SUPT5HO00267 1087 aaKnown RBP24.66■■□□□ 1.54
RBM47-202ENST00000381793 DCAF8L2P0C7V8 631 aa24.45■■□□□ 1.5
RBM47-202ENST00000381793 ZEB1P37275 1124 aaPredicted RBP24.27■■□□□ 1.48
RBM47-202ENST00000381793 PCGF6Q9BYE7 350 aa24.26■■□□□ 1.47
RBM47-202ENST00000381793 CENPBP07199 599 aaPredicted RBP24.23■■□□□ 1.47
RBM47-202ENST00000381793 HRCP23327 699 aa23.96■■□□□ 1.43
RBM47-202ENST00000381793 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
RBM47-202ENST00000381793 CCER1Q8TC90 406 aaPredicted RBP23.58■■□□□ 1.37
RBM47-202ENST00000381793 ERICH6Q7L0X2 663 aa23.57■■□□□ 1.36
RBM47-202ENST00000381793 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
RBM47-202ENST00000381793 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
RBM47-202ENST00000381793 APLP2Q06481 763 aa23.28■■□□□ 1.32
RBM47-202ENST00000381793 NEFLP07196 543 aa23.12■■□□□ 1.29
RBM47-202ENST00000381793 FAM9AQ8IZU1 332 aaPredicted RBP23.08■■□□□ 1.29
RBM47-202ENST00000381793 YTHDC1Q96MU7 727 aaKnown RBP23.08■■□□□ 1.28
RBM47-202ENST00000381793 PPARGC1BQ86YN6 1023 aaKnown RBP23.05■■□□□ 1.28
RBM47-202ENST00000381793 TTBK1Q5TCY1 1321 aaPredicted RBP22.95■■□□□ 1.27
RBM47-202ENST00000381793 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
RBM47-202ENST00000381793 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.23
RBM47-202ENST00000381793 DIEXFQ68CQ4 756 aaKnown RBP22.69■■□□□ 1.22
RBM47-202ENST00000381793 GTF3C3Q9Y5Q9 886 aa22.69■■□□□ 1.22
RBM47-202ENST00000381793 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
RBM47-202ENST00000381793 LOC105371045A0A1W2PR82 267 aa22.48■■□□□ 1.19
RBM47-202ENST00000381793 UBTFP17480 764 aaKnown RBP22.37■■□□□ 1.17
RBM47-202ENST00000381793 RTL5Q5HYW3 569 aaPredicted RBP22.32■■□□□ 1.16
RBM47-202ENST00000381793 CLSPNQ9HAW4 1339 aa22.28■■□□□ 1.16
RBM47-202ENST00000381793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
RBM47-202ENST00000381793 DAXXQ9UER7 740 aaPredicted RBP22.21■■□□□ 1.15
RBM47-202ENST00000381793 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
RBM47-202ENST00000381793 ZNF316A6NFI3 1004 aaPredicted RBP22.11■■□□□ 1.13
RBM47-202ENST00000381793 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
RBM47-202ENST00000381793 MYT1LQ9UL68 1186 aa22.04■■□□□ 1.12
RBM47-202ENST00000381793 RANGAP1P46060 587 aaPredicted RBP22.02■■□□□ 1.12
RBM47-202ENST00000381793 CDK11AQ9UQ88 783 aaPredicted RBP21.97■■□□□ 1.11
RBM47-202ENST00000381793 HNRNPUL2Q1KMD3 747 aaKnown RBP21.97■■□□□ 1.11
RBM47-202ENST00000381793 NEUROD1Q13562 356 aa21.96■■□□□ 1.11
RBM47-202ENST00000381793 BCANQ96GW7 911 aa21.85■■□□□ 1.09
RBM47-202ENST00000381793 ATP1B4Q9UN42 357 aaPredicted RBP21.74■■□□□ 1.07
RBM47-202ENST00000381793 ANP32EQ9BTT0 268 aa21.67■■□□□ 1.06
RBM47-202ENST00000381793 ANP32CO43423 234 aa21.65■■□□□ 1.06
RBM47-202ENST00000381793 ITGAEP38570 1179 aa21.6■■□□□ 1.05
RBM47-202ENST00000381793 ANP32AP39687 249 aaKnown RBP21.59■■□□□ 1.05
RBM47-202ENST00000381793 GLIPR1L2Q4G1C9 344 aa21.55■■□□□ 1.04
RBM47-202ENST00000381793 FKBP8Q14318 412 aa21.5■■□□□ 1.03
RBM47-202ENST00000381793 EIF5BO60841 1220 aaKnown RBP21.44■■□□□ 1.02
RBM47-202ENST00000381793 CCDC180Q9P1Z9 1646 aa21.42■■□□□ 1.02
RBM47-202ENST00000381793 BCL11AQ9H165 835 aa21.4■■□□□ 1.02
RBM47-202ENST00000381793 POLR3GLQ9BT43 218 aa21.37■■□□□ 1.01
RBM47-202ENST00000381793 MIER1Q8N108 512 aa21.3■■□□□ 1
RBM47-202ENST00000381793 ZBTB47Q9UFB7 747 aaPredicted RBP21.21■□□□□ 0.99
RBM47-202ENST00000381793 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
RBM47-202ENST00000381793 CNGB1Q14028 1251 aaPredicted RBP21.14■□□□□ 0.97
RBM47-202ENST00000381793 NBR1Q14596 966 aa21.13■□□□□ 0.97
RBM47-202ENST00000381793 FAM50AQ14320 339 aaKnown RBP21.11■□□□□ 0.97
RBM47-202ENST00000381793 NPM2Q86SE8 214 aaKnown RBP21.07■□□□□ 0.96
RBM47-202ENST00000381793 HNRNPUQ00839 825 aaKnown RBP eCLIP21.05■□□□□ 0.96
RBM47-202ENST00000381793 SUPT16HQ9Y5B9 1047 aaKnown RBP21.03■□□□□ 0.96
RBM47-202ENST00000381793 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
RBM47-202ENST00000381793 DDX10Q13206 875 aaKnown RBP20.97■□□□□ 0.95
RBM47-202ENST00000381793 ANP32BQ92688 251 aaKnown RBP20.95■□□□□ 0.94
RBM47-202ENST00000381793 CCDC136Q96JN2 1154 aa20.95■□□□□ 0.94
RBM47-202ENST00000381793 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
RBM47-202ENST00000381793 DDRGK1Q96HY6 314 aa20.83■□□□□ 0.93
RBM47-202ENST00000381793 PPM1GO15355 546 aaPredicted RBP20.83■□□□□ 0.92
RBM47-202ENST00000381793 ERICH6BQ5W0A0 696 aa20.81■□□□□ 0.92
RBM47-202ENST00000381793 TONSLQ96HA7 1378 aa20.81■□□□□ 0.92
RBM47-202ENST00000381793 UPF2Q9HAU5 1272 aaKnown RBP20.79■□□□□ 0.92
RBM47-202ENST00000381793 NOP58Q9Y2X3 529 aaKnown RBP20.78■□□□□ 0.92
RBM47-202ENST00000381793 DEKP35659 375 aaKnown RBP20.78■□□□□ 0.92
RBM47-202ENST00000381793 RBM19Q9Y4C8 960 aaKnown RBP20.77■□□□□ 0.92
RBM47-202ENST00000381793 NEFMP07197 916 aa20.74■□□□□ 0.91
RBM47-202ENST00000381793 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
RBM47-202ENST00000381793 FAM9BQ8IZU0 186 aa20.73■□□□□ 0.91
RBM47-202ENST00000381793 TSHZ2Q9NRE2 1034 aa20.73■□□□□ 0.91
RBM47-202ENST00000381793 CANXP27824 592 aaKnown RBP20.72■□□□□ 0.91
RBM47-202ENST00000381793 PPP4R2Q9NY27 417 aa20.71■□□□□ 0.91
RBM47-202ENST00000381793 IRX6P78412 446 aaPredicted RBP20.67■□□□□ 0.9
RBM47-202ENST00000381793 MRS2Q9HD23 443 aa20.63■□□□□ 0.89
RBM47-202ENST00000381793 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
RBM47-202ENST00000381793 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.59■□□□□ 0.89
RBM47-202ENST00000381793 RTN4Q9NQC3 1192 aaKnown RBP20.57■□□□□ 0.88
RBM47-202ENST00000381793 HSP90AA1P07900 732 aaKnown RBP20.56■□□□□ 0.88
RBM47-202ENST00000381793 BECN1Q14457 450 aa20.56■□□□□ 0.88
RBM47-202ENST00000381793 TRIM44Q96DX7 344 aaPredicted RBP20.54■□□□□ 0.88
RBM47-202ENST00000381793 TNNT2P45379 298 aaPredicted RBP20.53■□□□□ 0.88
RBM47-202ENST00000381793 TMC1Q8TDI8 760 aa20.53■□□□□ 0.88
RBM47-202ENST00000381793 SLC4A1APQ9BWU0 796 aaKnown RBP20.51■□□□□ 0.87
RBM47-202ENST00000381793 EEA1Q15075 1411 aa20.51■□□□□ 0.87
RBM47-202ENST00000381793 CEP162Q5TB80 1403 aa20.5■□□□□ 0.87
RBM47-202ENST00000381793 CCER2I3L3R5 266 aa20.49■□□□□ 0.87
RBM47-202ENST00000381793 NAP1L5Q96NT1 182 aaPredicted RBP20.45■□□□□ 0.86
RBM47-202ENST00000381793 CLIP1P30622 1438 aa20.43■□□□□ 0.86
RBM47-202ENST00000381793 EIF4G2P78344 907 aaKnown RBP eCLIP20.41■□□□□ 0.86
RBM47-202ENST00000381793 TNIKQ9UKE5 1360 aa20.41■□□□□ 0.86
RBM47-202ENST00000381793 ARXQ96QS3 562 aa20.41■□□□□ 0.86
RBM47-202ENST00000381793 LAS1LQ9Y4W2 734 aaKnown RBP20.4■□□□□ 0.86
RBM47-202ENST00000381793 GOLGA3Q08378 1498 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 214.3 ms