Protein–RNA interactions for Protein: P52593

NUP188, Nucleoporin NUP188, yeastyeast

Known RBP Predictions only

Length 1,655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP188P52593 YBL028CYBL028C 321 nt0.08□□□□□ -2.4
NUP188P52593 YOL050CYOL050C 321 nt0.08□□□□□ -2.4
NUP188P52593 KDX1YKL161C 1302 nt0.07□□□□□ -2.4
NUP188P52593 SNC1YAL030W 354 nt0.07□□□□□ -2.4
NUP188P52593 RPL32YBL092W 393 nt0.07□□□□□ -2.4
NUP188P52593 YDR261W-AYDR261W-A 1317 nt0.07□□□□□ -2.4
NUP188P52593 GLC7YER133W 939 nt0.06□□□□□ -2.4
NUP188P52593 SNX4YJL036W 1272 nt0.06□□□□□ -2.4
NUP188P52593 PXA2YKL188C 2562 nt0.06□□□□□ -2.4
NUP188P52593 MEI4YER044C-A 1227 nt0.05□□□□□ -2.4
NUP188P52593 YMR324CYMR324C 243 nt0.05□□□□□ -2.4
NUP188P52593 YPL135C-AYPL135C-A 174 nt0.05□□□□□ -2.4
NUP188P52593 YBL100W-BYBL100W-B 5313 nt0.05□□□□□ -2.4
NUP188P52593 WHI3YNL197C 1986 nt0.05□□□□□ -2.4
NUP188P52593 YFL012W-AYFL012W-A 375 nt0.05□□□□□ -2.4
NUP188P52593 YMR31YFR049W 372 nt0.05□□□□□ -2.4
NUP188P52593 GRX7YBR014C 612 nt0.05□□□□□ -2.4
NUP188P52593 GIC1YHR061C 945 nt0.04□□□□□ -2.4
NUP188P52593 YIL141WYIL141W 390 nt0.04□□□□□ -2.4
NUP188P52593 YCR007CYCR007C 720 nt0.03□□□□□ -2.4
NUP188P52593 YER189WYER189W 369 nt0.03□□□□□ -2.4
NUP188P52593 IRC23YOR044W 474 nt0.03□□□□□ -2.4
NUP188P52593 NIP100YPL174C 2607 nt0.03□□□□□ -2.41
NUP188P52593 MZM1YDR493W 372 nt0.02□□□□□ -2.41
NUP188P52593 UTP10YJL109C 5310 nt0.02□□□□□ -2.41
NUP188P52593 YDL157CYDL157C 357 nt0.02□□□□□ -2.41
NUP188P52593 YOL085W-AYOL085W-A 213 nt0.02□□□□□ -2.41
NUP188P52593 LOA1YPR139C 903 nt0.02□□□□□ -2.41
NUP188P52593 NUP188YML103C 4968 nt0.01□□□□□ -2.41
NUP188P52593 AIM9YER080W 1884 nt0.01□□□□□ -2.41
NUP188P52593 POP8YBL018C 402 nt0.01□□□□□ -2.41
NUP188P52593 STB6YKL072W 2301 nt0□□□□□ -2.41
NUP188P52593 YDR381C-AYDR381C-A 345 nt0□□□□□ -2.41
NUP188P52593 YEL009C-AYEL009C-A 408 nt0□□□□□ -2.41
NUP188P52593 YNR034W-AYNR034W-A 297 nt0□□□□□ -2.41
NUP188P52593 AFR1YDR085C 1863 nt-0.01□□□□□ -2.41
NUP188P52593 YER147C-AYER147C-A 411 nt-0.01□□□□□ -2.41
NUP188P52593 YPR145C-AYPR145C-A 237 nt-0.01□□□□□ -2.41
NUP188P52593 SDL1YIL167W 633 nt-0.02□□□□□ -2.41
NUP188P52593 YFR054CYFR054C 579 nt-0.02□□□□□ -2.41
NUP188P52593 YDR042CYDR042C 603 nt-0.03□□□□□ -2.41
NUP188P52593 VPS74YDR372C 1038 nt-0.04□□□□□ -2.42
NUP188P52593 DIG2YDR480W 972 nt-0.04□□□□□ -2.42
NUP188P52593 YLR400WYLR400W 474 nt-0.04□□□□□ -2.42
NUP188P52593 IRC14YOR135C 342 nt-0.04□□□□□ -2.42
NUP188P52593 SLU7YDR088C 1149 nt-0.05□□□□□ -2.42
NUP188P52593 COF1YLL050C 432 nt-0.05□□□□□ -2.42
NUP188P52593 NYV1YLR093C 762 nt-0.05□□□□□ -2.42
NUP188P52593 REX3YLR107W 1215 nt-0.05□□□□□ -2.42
NUP188P52593 REV7YIL139C 738 nt-0.06□□□□□ -2.42
NUP188P52593 DBP6YNR038W 1890 nt-0.06□□□□□ -2.42
NUP188P52593 PRM8YGL053W 714 nt-0.07□□□□□ -2.42
NUP188P52593 FYV6YNL133C 522 nt-0.07□□□□□ -2.42
NUP188P52593 YOL013W-AYOL013W-A 192 nt-0.07□□□□□ -2.42
NUP188P52593 VMA7YGR020C 357 nt-0.08□□□□□ -2.42
NUP188P52593 RRT7YLL030C 342 nt-0.08□□□□□ -2.42
NUP188P52593 RPL37AYLR185W 267 nt-0.08□□□□□ -2.42
NUP188P52593 SMY1YKL079W 1971 nt-0.08□□□□□ -2.42
NUP188P52593 SWS2YNL081C 432 nt-0.08□□□□□ -2.42
NUP188P52593 SFM1YOR021C 642 nt-0.08□□□□□ -2.42
NUP188P52593 MKT1YNL085W 2493 nt-0.09□□□□□ -2.42
NUP188P52593 CCL1YPR025C 1182 nt-0.09□□□□□ -2.42
NUP188P52593 SPT21YMR179W 2277 nt-0.1□□□□□ -2.43
NUP188P52593 YGL109WYGL109W 324 nt-0.1□□□□□ -2.43
NUP188P52593 YNR068CYNR068C 819 nt-0.1□□□□□ -2.43
NUP188P52593 MYO1YHR023W 5787 nt-0.1□□□□□ -2.43
NUP188P52593 PES4YFR023W 1836 nt-0.1□□□□□ -2.43
NUP188P52593 NUR1YDL089W 1455 nt-0.11□□□□□ -2.43
NUP188P52593 YEA4YEL004W 1029 nt-0.11□□□□□ -2.43
NUP188P52593 POL4YCR014C 1749 nt-0.11□□□□□ -2.43
NUP188P52593 BIT61YJL058C 1632 nt-0.11□□□□□ -2.43
NUP188P52593 YCR108CYCR108C 192 nt-0.11□□□□□ -2.43
NUP188P52593 CYB5YNL111C 363 nt-0.11□□□□□ -2.43
NUP188P52593 YBR076C-AYBR076C-A 267 nt-0.11□□□□□ -2.43
NUP188P52593 snR190snR190 190 nt-0.11□□□□□ -2.43
NUP188P52593 TSA2YDR453C 591 nt-0.12□□□□□ -2.43
NUP188P52593 YJL007CYJL007C 315 nt-0.12□□□□□ -2.43
NUP188P52593 CMC2YBL059C-A 330 nt-0.12□□□□□ -2.43
NUP188P52593 YCR015CYCR015C 954 nt-0.13□□□□□ -2.43
NUP188P52593 UAF30YOR295W 687 nt-0.13□□□□□ -2.43
NUP188P52593 GDS1YOR355W 1569 nt-0.13□□□□□ -2.43
NUP188P52593 VIK1YPL253C 1944 nt-0.14□□□□□ -2.43
NUP188P52593 YGR219WYGR219W 342 nt-0.14□□□□□ -2.43
NUP188P52593 COS7YDL248W 1152 nt-0.14□□□□□ -2.43
NUP188P52593 YHL002C-AYHL002C-A 489 nt-0.14□□□□□ -2.43
NUP188P52593 YIR036W-AYIR036W-A 402 nt-0.14□□□□□ -2.43
NUP188P52593 YLL020CYLL020C 306 nt-0.14□□□□□ -2.43
NUP188P52593 SRL4YPL033C 846 nt-0.14□□□□□ -2.43
NUP188P52593 YPL034WYPL034W 498 nt-0.14□□□□□ -2.43
NUP188P52593 ACA1YER045C 1470 nt-0.14□□□□□ -2.43
NUP188P52593 COX3Q0275 810 nt-0.15□□□□□ -2.43
NUP188P52593 CTL1YMR180C 963 nt-0.15□□□□□ -2.43
NUP188P52593 CYC7YEL039C 342 nt-0.16□□□□□ -2.44
NUP188P52593 YGR164WYGR164W 336 nt-0.16□□□□□ -2.44
NUP188P52593 YLR124WYLR124W 345 nt-0.16□□□□□ -2.44
NUP188P52593 MLP1YKR095W 5628 nt-0.17□□□□□ -2.44
NUP188P52593 RPL35BYDL136W 363 nt-0.17□□□□□ -2.44
NUP188P52593 RPL35AYDL191W 363 nt-0.17□□□□□ -2.44
NUP188P52593 TFB5YDR079C-A 219 nt-0.17□□□□□ -2.44
NUP188P52593 RPC10YHR143W-A 213 nt-0.17□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 84.2 ms